BLASTX nr result

ID: Coptis24_contig00015053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015053
         (1381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29146.3| unnamed protein product [Vitis vinifera]              271   2e-70
ref|XP_002272806.1| PREDICTED: uncharacterized protein LOC100255...   270   7e-70
ref|XP_003530371.1| PREDICTED: uncharacterized protein LOC100790...   228   4e-57
ref|XP_002316460.1| predicted protein [Populus trichocarpa] gi|2...   224   5e-56
ref|XP_002311922.1| predicted protein [Populus trichocarpa] gi|2...   222   2e-55

>emb|CBI29146.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  271 bits (694), Expect = 2e-70
 Identities = 174/362 (48%), Positives = 215/362 (59%), Gaps = 15/362 (4%)
 Frame = +3

Query: 303  DVINKRDNPLFCSS---------IESQDVVEXXXXXXXXVY----PNDEYDGVRDATRGR 443
            D +NKRDNPLF ++         ++SQ+  +              PN E   V DATRGR
Sbjct: 53   DFLNKRDNPLFWTTTNTLPPENPVQSQNATDSESKFERKASKFSAPNSE---VVDATRGR 109

Query: 444  SVTRNIATGNHSVSSRQAM-MGQCLXXXXXXXXXXXXXXXXNEKRYSHSSTLRSKIIGQL 620
            SV+R  + GN      + +   + +                 E+  S S   R++    L
Sbjct: 110  SVSRTSSAGNQIAGGGKGIGRSRSVSRRPVPRGNRWSSESEVEQECSLSVNSRNRRNLNL 169

Query: 621  SSSVHKATCINNRDSEHSSRTRNSQTWSSQHPLSEPLDHFSSSSQASFRXXXXXXXXXXX 800
            + +  K   +    SE S +  N+QT SSQH  SE  D  +S  Q               
Sbjct: 170  APNNGKRANLIRPSSEFSDQINNTQTRSSQHRPSELSDRSASGLQIPNSEDEFSVGSFSE 229

Query: 801  XXXKTVLADSEQIKSFQ-SDLEAEDIGTSGLYDTVRSEVRRAITEIQGDLENAIQKKNLT 977
               KT+ A  EQIKSFQ +DLE ++   SG+Y+TVRSEVRRAI++IQ DLE+AI++ N  
Sbjct: 230  AEEKTIKAVCEQIKSFQRNDLEGDNTA-SGIYETVRSEVRRAISDIQNDLESAIRRNNAA 288

Query: 978  NIAVTNVDDIPRDLVNPDAIELVSEIRSEYAAKMKQSQDRARKLRADLAVEEHREQEFSR 1157
             IA TNV DIP DLVNP A+ELV +IR EYA K++QSQ+RARKLRADLAVEEHR QE SR
Sbjct: 289  GIATTNVTDIPPDLVNPGAVELVLDIREEYAKKLEQSQERARKLRADLAVEEHRGQELSR 348

Query: 1158 ILEEILPEPKKFQTQNSRPRRKTSIERRRMSKRLTEEALNYFDECVSISTFDGSDFSSTE 1337
            IL+EILPEPK      SR  RKTSIERR+MSKRLTEEA+ YFDECVSISTFD SDFSS E
Sbjct: 349  ILKEILPEPKITTAPKSRMGRKTSIERRKMSKRLTEEAMAYFDECVSISTFDSSDFSSPE 408

Query: 1338 DP 1343
            DP
Sbjct: 409  DP 410


>ref|XP_002272806.1| PREDICTED: uncharacterized protein LOC100255666 [Vitis vinifera]
          Length = 586

 Score =  270 bits (690), Expect = 7e-70
 Identities = 179/373 (47%), Positives = 216/373 (57%), Gaps = 26/373 (6%)
 Frame = +3

Query: 303  DVINKRDNPLFCSS---------IESQDVVEXXXXXXXXVY----PNDEYDGVRDATRGR 443
            D +NKRDNPLF ++         ++SQ+  +              PN E   V DATRGR
Sbjct: 53   DFLNKRDNPLFWTTTNTLPPENPVQSQNATDSESKFERKASKFSAPNSE---VVDATRGR 109

Query: 444  SVTRNIATGNH------------SVSSRQAMMGQCLXXXXXXXXXXXXXXXXNEKRYSHS 587
            SV+R  + GN             SVS R    G                    E+  S S
Sbjct: 110  SVSRTSSAGNQIAGGGKGIGRSRSVSRRPVPRGN-----RWSSEDSLLLQSEVEQECSLS 164

Query: 588  STLRSKIIGQLSSSVHKATCINNRDSEHSSRTRNSQTWSSQHPLSEPLDHFSSSSQASFR 767
               R++    L+ +  K   +    SE S +  N+QT SSQH  SE  D  +S  Q    
Sbjct: 165  VNSRNRRNLNLAPNNGKRANLIRPSSEFSDQINNTQTRSSQHRPSELSDRSASGLQIPNS 224

Query: 768  XXXXXXXXXXXXXXKTVLADSEQIKSFQ-SDLEAEDIGTSGLYDTVRSEVRRAITEIQGD 944
                          KT+ A  EQIKSFQ +DLE ++   SG+Y+TVRSEVRRAI++IQ D
Sbjct: 225  EDEFSVGSFSEAEEKTIKAVCEQIKSFQRNDLEGDNTA-SGIYETVRSEVRRAISDIQND 283

Query: 945  LENAIQKKNLTNIAVTNVDDIPRDLVNPDAIELVSEIRSEYAAKMKQSQDRARKLRADLA 1124
            LE+AI++ N   IA TNV DIP DLVNP A+ELV +IR EYA K++QSQ+RARKLRADLA
Sbjct: 284  LESAIRRNNAAGIATTNVTDIPPDLVNPGAVELVLDIREEYAKKLEQSQERARKLRADLA 343

Query: 1125 VEEHREQEFSRILEEILPEPKKFQTQNSRPRRKTSIERRRMSKRLTEEALNYFDECVSIS 1304
            VEEHR QE SRIL+EILPEPK      SR  RKTSIERR+MSKRLTEEA+ YFDECVSIS
Sbjct: 344  VEEHRGQELSRILKEILPEPKITTAPKSRMGRKTSIERRKMSKRLTEEAMAYFDECVSIS 403

Query: 1305 TFDGSDFSSTEDP 1343
            TFD SDFSS EDP
Sbjct: 404  TFDSSDFSSPEDP 416


>ref|XP_003530371.1| PREDICTED: uncharacterized protein LOC100790310 [Glycine max]
          Length = 537

 Score =  228 bits (580), Expect = 4e-57
 Identities = 153/370 (41%), Positives = 200/370 (54%), Gaps = 11/370 (2%)
 Frame = +3

Query: 303  DVINKRDNPLFCSSIESQDVVEXXXXXXXXVYPNDEYDGVRDATRGRSVTRNIATGNHSV 482
            + +NKRDNPLF    +S   +            +   +  R A  GR  T  + +   S 
Sbjct: 62   EFLNKRDNPLFFDETQSTKAL--------LTETSTPANSARSAGPGRRETGRVLSIADS- 112

Query: 483  SSRQAMMGQCLXXXXXXXXXXXXXXXXNEKRYSHSSTLRSKIIGQ------LSSSVHKAT 644
              R     QC                   +R+ + ST  S+   +      L  S  K  
Sbjct: 113  GRRARSASQCPV----------------SRRHLNYSTSESEAESKEGNGLKLVGSNRKGG 156

Query: 645  CINNRDSEHSSRTRNSQTWSSQHPLSEPLDHFSSS----SQASFRXXXXXXXXXXXXXXK 812
             + + ++  + + ++ +TWSS+H   E  D F+++       +                K
Sbjct: 157  LVGSSENGVTDQVKDLRTWSSRHLSVEVSDSFAATLPGLQTQTCDDEASTASSGFGSDEK 216

Query: 813  TVLADSEQIKSFQSDL-EAEDIGTSGLYDTVRSEVRRAITEIQGDLENAIQKKNLTNIAV 989
            T+ A  EQ+KS Q D+ EA DI     Y+TVRSEV+RAI+EIQ  LE+AIQ+ N   I V
Sbjct: 217  TIKAVFEQMKSVQGDMPEASDI-----YETVRSEVKRAISEIQIGLESAIQRSNAAAITV 271

Query: 990  TNVDDIPRDLVNPDAIELVSEIRSEYAAKMKQSQDRARKLRADLAVEEHREQEFSRILEE 1169
            TN+ DIP DLVNP A+ELV EIR EYA ++++SQ+RAR LRADLAVEEH  QE  RIL+E
Sbjct: 272  TNLSDIPSDLVNPGAVELVLEIRKEYARRLEESQERARNLRADLAVEEHHGQELDRILKE 331

Query: 1170 ILPEPKKFQTQNSRPRRKTSIERRRMSKRLTEEALNYFDECVSISTFDGSDFSSTEDPLN 1349
            +LP PK   TQ  RP RK+SIERRRMSKRL E+A  YFDECVS+STFD SDFSS EDP  
Sbjct: 332  VLPYPKTPVTQKPRPARKSSIERRRMSKRLAEDAKAYFDECVSLSTFDSSDFSSPEDPPV 391

Query: 1350 TLAVCDPPSG 1379
                   PSG
Sbjct: 392  NFVGPPTPSG 401


>ref|XP_002316460.1| predicted protein [Populus trichocarpa] gi|222865500|gb|EEF02631.1|
            predicted protein [Populus trichocarpa]
          Length = 593

 Score =  224 bits (570), Expect = 5e-56
 Identities = 154/371 (41%), Positives = 198/371 (53%), Gaps = 15/371 (4%)
 Frame = +3

Query: 303  DVINKRDNPLFCSSIE------SQDVVEXXXXXXXXVYPNDEYDGVRDATRGRSVTRNIA 464
            D + KRDNPL+ S++       S+ V +          PN     V D+ RGRSV+R   
Sbjct: 74   DFLIKRDNPLYWSNVSPPGKEVSEVVADKEESKSAPTKPN----AVGDSRRGRSVSRKAD 129

Query: 465  TG-NHSVSSRQAMMGQCLXXXXXXXXXXXXXXXXNEKRYSHS--STLRSKIIGQ-----L 620
             G N S   R    G                   N +  +    S+L   I G      +
Sbjct: 130  AGRNVSGIGRSLSRGPVSRGRSVSRPPGSGGHFVNSESDAEQEGSSLMKYINGSGGLSDV 189

Query: 621  SSSVHKATCINNRDSEHSSRTRNSQTWSSQHPLSEPLDHFSSSSQASFRXXXXXXXXXXX 800
            S++   +            + R+S   S       P   F S      R           
Sbjct: 190  SNAGRNSDLARRSYDSKFEKMRSSPMRSDGSAADLPSLPFRSWEDGGLRSSFSEAEE--- 246

Query: 801  XXXKTVLADSEQIKSFQSDLEAEDIGTSGLYDTVRSEVRRAITEIQGDLENAIQKKNLTN 980
               +T+ A  EQ++SFQ D    D  +S +Y+TVRSEVRRAI +IQ DLE+ I++ N T 
Sbjct: 247  ---RTIKAVCEQMQSFQGD-NLGDGTSSRIYETVRSEVRRAIADIQNDLESTIRRSNTTA 302

Query: 981  IAVTNVDDIPRDLVNPDAIELVSEIRSEYAAKMKQSQDRARKLRADLAVEEHREQEFSRI 1160
            IA+ NV DIP DLVNP A+ELV +IR EYA K++QS +RARKLRADLAVEEHR  E SRI
Sbjct: 303  IAMANVTDIPPDLVNPSAVELVLDIRREYANKLEQSHERARKLRADLAVEEHRGLELSRI 362

Query: 1161 LEEILPEPKKFQTQNSRPRRKTSIERRRMSKRLTEEALNYFDECVSISTFDGSDFSSTED 1340
            L+E+LP PK    Q  R  RK+SIERR++SKRLT+EA+ YFDECVS+STFD SDFSS ED
Sbjct: 363  LKEVLPHPKTSNVQKPRAGRKSSIERRKVSKRLTDEAMAYFDECVSLSTFDSSDFSSPED 422

Query: 1341 -PLNTLAVCDP 1370
             P+N + V  P
Sbjct: 423  PPINFVGVSSP 433


>ref|XP_002311922.1| predicted protein [Populus trichocarpa] gi|222851742|gb|EEE89289.1|
            predicted protein [Populus trichocarpa]
          Length = 586

 Score =  222 bits (566), Expect = 2e-55
 Identities = 154/373 (41%), Positives = 203/373 (54%), Gaps = 18/373 (4%)
 Frame = +3

Query: 303  DVINKRDNPLFCSSIESQD------VVEXXXXXXXXVYPNDEYDGVRDATRGRSVTRNIA 464
            +++ KRDNPL+ S++   D      VV+          PN   DG  D+ RGRSV+R   
Sbjct: 72   NLLIKRDNPLYWSNVSPPDKEVGEVVVDKEESKSAPTKPN--VDG--DSRRGRSVSRKAD 127

Query: 465  TGNH------SVSSRQAMMGQCLXXXXXXXXXXXXXXXXNEKRYSHSSTLRSKIIGQLSS 626
             G +      S+S      G+ +                 E+  S  +  R+   G  S 
Sbjct: 128  AGKNVSGIGRSLSRGPVSRGRSVSRPPGSRGHFVNSESDAEREGSSLTKYRNGSGGLSSV 187

Query: 627  SVHKATCINNRDSEHSSRTRNSQTWSSQHPLSEPLDHFSSSSQASFRXXXXXXXXXXXXX 806
            S          D+  +S    S     +   S P+    S+S                  
Sbjct: 188  S----------DAGRNSDLARSYDCKFEKMRSFPMQSDGSASDLPSLPIRSWEDKGLGSS 237

Query: 807  X-----KTVLADSEQIKSFQSDLEAEDIGTSGLYDTVRSEVRRAITEIQGDLENAIQKKN 971
                  +T+ A  EQ++SFQ D    D  +S +Y+TVRSEVRRAI +IQ DLE+ I++ N
Sbjct: 238  ISEAEERTIKAVFEQMQSFQGD-NLGDGTSSRIYETVRSEVRRAIADIQNDLESTIRRSN 296

Query: 972  LTNIAVTNVDDIPRDLVNPDAIELVSEIRSEYAAKMKQSQDRARKLRADLAVEEHREQEF 1151
             T IA+ NV+DIP DLVNP A+ELV +IR EYA K++QSQ+RARKLRADLAVEEHR  E 
Sbjct: 297  TTAIALANVNDIPPDLVNPSAVELVLDIRREYAKKLEQSQERARKLRADLAVEEHRGLEL 356

Query: 1152 SRILEEILPEPKKFQTQNSRPRRKTSIERRRMSKRLTEEALNYFDECVSISTFDGSDFSS 1331
            SRIL+E+LP PK    Q  R  RK+SIER ++SKRLT+EA+ YFDECVS+STFD SDFSS
Sbjct: 357  SRILKEVLPHPKMSNVQKPRAGRKSSIERSKVSKRLTDEAMAYFDECVSLSTFDSSDFSS 416

Query: 1332 TED-PLNTLAVCD 1367
             ED P+N + V D
Sbjct: 417  PEDPPINLVGVGD 429


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