BLASTX nr result

ID: Coptis24_contig00015044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015044
         (1628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635110.1| PREDICTED: LETM1 and EF-hand domain-containi...   212   3e-52
emb|CBI23351.3| unnamed protein product [Vitis vinifera]              212   3e-52
ref|XP_002309727.1| predicted protein [Populus trichocarpa] gi|2...   206   4e-52
ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containi...   211   5e-52
ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|2...   204   1e-51

>ref|XP_003635110.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
            mitochondrial-like [Vitis vinifera]
          Length = 504

 Score =  212 bits (539), Expect = 3e-52
 Identities = 115/172 (66%), Positives = 125/172 (72%)
 Frame = -3

Query: 1626 TLDNINRPRLVNMCKYMGISPYGTDAYLRYALRKRLQWIKNDDKLIQAEGVDSLSEXXXX 1447
            TLDNI+RPRLVNMCKYMGISPYGTDAYLRY LRKRLQWIKNDD++IQAEGV+SLSE    
Sbjct: 122  TLDNISRPRLVNMCKYMGISPYGTDAYLRYMLRKRLQWIKNDDRMIQAEGVESLSE---- 177

Query: 1446 XXXXXXXXXXXXXXXXXXXXELRQTVRERGILGLLSVEEMRQQLRDWXXXXXXXXXXXXX 1267
                                EL Q  R+RG+LGLLSVEEMRQQLRDW             
Sbjct: 178  -------------------AELHQACRDRGLLGLLSVEEMRQQLRDWLDLSLNHAVPSSL 218

Query: 1266 XXXSRAFTVSGKLRPEEAVMNTMSSLPDEVVDTVQVTSLPSEDSVSERRRKL 1111
               SRAFTVSGK++PEEAV  T+SSLPDEVVDTV VT+LPSEDSVSERRRKL
Sbjct: 219  LILSRAFTVSGKVKPEEAVQATLSSLPDEVVDTVGVTTLPSEDSVSERRRKL 270



 Score =  159 bits (403), Expect(2) = 1e-50
 Identities = 82/118 (69%), Positives = 95/118 (80%)
 Frame = -3

Query: 603 AKKAYRXXXXXXXXXXXXXXXXKISSALIDRVDAMLQKLEKEIDDVDAEIGDRWRLLDRD 424
           A++AYR                K SSALIDRVDAMLQKLEKEIDDVDA+IGDRWRLLDRD
Sbjct: 381 AREAYRAARKDSDHAVEMAVADKASSALIDRVDAMLQKLEKEIDDVDAKIGDRWRLLDRD 440

Query: 423 YDGKVTPEEVAVAAAYLKDTLNKEGVQELISSLSKDRDGKILVEDIVKLGTQKEDVNA 250
           YDGKVTPEEVA A  YLKDTL K+G+QELIS+LSKD++GKI VEDI+KLG+++ED N+
Sbjct: 441 YDGKVTPEEVASATMYLKDTLGKDGIQELISNLSKDKEGKIRVEDIIKLGSEREDDNS 498



 Score = 68.6 bits (166), Expect(2) = 1e-50
 Identities = 36/80 (45%), Positives = 50/80 (62%)
 Frame = -1

Query: 959 KARLKGSDISQEDVALKEMESSTARDAQEQAPSEMLDKRDQLCXXXXXXXXXXXXXXXXX 780
           +AR+K S ++Q+DVAL+EM   TAR+AQEQA ++ L+K+ Q+C                 
Sbjct: 291 QARIKESTVNQKDVALEEMTIPTAREAQEQAEAKTLEKQQQICELSRALVVLASASSVSW 350

Query: 779 XXXEFMRLVNKEIKLYNSMV 720
               F+RLVNKEI+LYN MV
Sbjct: 351 EREAFLRLVNKEIELYNHMV 370


>emb|CBI23351.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  212 bits (539), Expect = 3e-52
 Identities = 115/172 (66%), Positives = 125/172 (72%)
 Frame = -3

Query: 1626 TLDNINRPRLVNMCKYMGISPYGTDAYLRYALRKRLQWIKNDDKLIQAEGVDSLSEXXXX 1447
            TLDNI+RPRLVNMCKYMGISPYGTDAYLRY LRKRLQWIKNDD++IQAEGV+SLSE    
Sbjct: 50   TLDNISRPRLVNMCKYMGISPYGTDAYLRYMLRKRLQWIKNDDRMIQAEGVESLSE---- 105

Query: 1446 XXXXXXXXXXXXXXXXXXXXELRQTVRERGILGLLSVEEMRQQLRDWXXXXXXXXXXXXX 1267
                                EL Q  R+RG+LGLLSVEEMRQQLRDW             
Sbjct: 106  -------------------AELHQACRDRGLLGLLSVEEMRQQLRDWLDLSLNHAVPSSL 146

Query: 1266 XXXSRAFTVSGKLRPEEAVMNTMSSLPDEVVDTVQVTSLPSEDSVSERRRKL 1111
               SRAFTVSGK++PEEAV  T+SSLPDEVVDTV VT+LPSEDSVSERRRKL
Sbjct: 147  LILSRAFTVSGKVKPEEAVQATLSSLPDEVVDTVGVTTLPSEDSVSERRRKL 198



 Score =  159 bits (403), Expect(2) = 1e-50
 Identities = 82/118 (69%), Positives = 95/118 (80%)
 Frame = -3

Query: 603 AKKAYRXXXXXXXXXXXXXXXXKISSALIDRVDAMLQKLEKEIDDVDAEIGDRWRLLDRD 424
           A++AYR                K SSALIDRVDAMLQKLEKEIDDVDA+IGDRWRLLDRD
Sbjct: 309 AREAYRAARKDSDHAVEMAVADKASSALIDRVDAMLQKLEKEIDDVDAKIGDRWRLLDRD 368

Query: 423 YDGKVTPEEVAVAAAYLKDTLNKEGVQELISSLSKDRDGKILVEDIVKLGTQKEDVNA 250
           YDGKVTPEEVA A  YLKDTL K+G+QELIS+LSKD++GKI VEDI+KLG+++ED N+
Sbjct: 369 YDGKVTPEEVASATMYLKDTLGKDGIQELISNLSKDKEGKIRVEDIIKLGSEREDDNS 426



 Score = 68.6 bits (166), Expect(2) = 1e-50
 Identities = 36/80 (45%), Positives = 50/80 (62%)
 Frame = -1

Query: 959 KARLKGSDISQEDVALKEMESSTARDAQEQAPSEMLDKRDQLCXXXXXXXXXXXXXXXXX 780
           +AR+K S ++Q+DVAL+EM   TAR+AQEQA ++ L+K+ Q+C                 
Sbjct: 219 QARIKESTVNQKDVALEEMTIPTAREAQEQAEAKTLEKQQQICELSRALVVLASASSVSW 278

Query: 779 XXXEFMRLVNKEIKLYNSMV 720
               F+RLVNKEI+LYN MV
Sbjct: 279 EREAFLRLVNKEIELYNHMV 298


>ref|XP_002309727.1| predicted protein [Populus trichocarpa] gi|222852630|gb|EEE90177.1|
           predicted protein [Populus trichocarpa]
          Length = 750

 Score =  163 bits (412), Expect(2) = 4e-52
 Identities = 84/123 (68%), Positives = 94/123 (76%)
 Frame = -3

Query: 603 AKKAYRXXXXXXXXXXXXXXXXKISSALIDRVDAMLQKLEKEIDDVDAEIGDRWRLLDRD 424
           A KAYR                ++SSALI+RVD MLQ LEKEIDDVDA+IGD WR+LDRD
Sbjct: 627 AVKAYRAAREETDRASEADERDEVSSALIERVDGMLQNLEKEIDDVDAKIGDHWRILDRD 686

Query: 423 YDGKVTPEEVAVAAAYLKDTLNKEGVQELISSLSKDRDGKILVEDIVKLGTQKEDVNAAD 244
           YDGKVTPEEVA AA YLKDTL KEG+QELIS+LSKDRDGKILVEDIVKLG+  ED  A +
Sbjct: 687 YDGKVTPEEVAAAAMYLKDTLGKEGIQELISNLSKDRDGKILVEDIVKLGSWTEDAKATE 746

Query: 243 EEQ 235
           E +
Sbjct: 747 ERE 749



 Score = 70.1 bits (170), Expect(2) = 4e-52
 Identities = 39/80 (48%), Positives = 50/80 (62%)
 Frame = -1

Query: 959 KARLKGSDISQEDVALKEMESSTARDAQEQAPSEMLDKRDQLCXXXXXXXXXXXXXXXXX 780
           +AR+K S +S+EDVALKEM  STAR+AQE A +  L+K++ LC                 
Sbjct: 537 RARMKESKVSEEDVALKEMTLSTAREAQEMARASTLEKQEHLCELSRALAVLASASSVSR 596

Query: 779 XXXEFMRLVNKEIKLYNSMV 720
              EF+ LVNKEI+LYNSMV
Sbjct: 597 EREEFLGLVNKEIELYNSMV 616



 Score =  206 bits (523), Expect = 2e-50
 Identities = 115/172 (66%), Positives = 124/172 (72%)
 Frame = -3

Query: 1626 TLDNINRPRLVNMCKYMGISPYGTDAYLRYALRKRLQWIKNDDKLIQAEGVDSLSEXXXX 1447
            TLDNI+RPRLVNMCKYMGISP+GTDAYLRY LRKRLQ IKNDD+LIQAEGV+SLSE    
Sbjct: 368  TLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRKRLQRIKNDDRLIQAEGVESLSE---- 423

Query: 1446 XXXXXXXXXXXXXXXXXXXXELRQTVRERGILGLLSVEEMRQQLRDWXXXXXXXXXXXXX 1267
                                ELR+  RERG+LGLLSVEEMRQQL DW             
Sbjct: 424  -------------------AELREDCRERGMLGLLSVEEMRQQLHDWLDLSLNHSVPSSL 464

Query: 1266 XXXSRAFTVSGKLRPEEAVMNTMSSLPDEVVDTVQVTSLPSEDSVSERRRKL 1111
               SRAFTVSGKL+PEEAV  T+SSLPDEVVDTV VT+LPSEDSVSERRRKL
Sbjct: 465  LILSRAFTVSGKLKPEEAVRATLSSLPDEVVDTVGVTALPSEDSVSERRRKL 516


>ref|XP_002275474.1| PREDICTED: LETM1 and EF-hand domain-containing protein 1,
            mitochondrial [Vitis vinifera]
            gi|296084337|emb|CBI24725.3| unnamed protein product
            [Vitis vinifera]
          Length = 764

 Score =  162 bits (411), Expect(2) = 5e-52
 Identities = 83/120 (69%), Positives = 95/120 (79%)
 Frame = -3

Query: 603  AKKAYRXXXXXXXXXXXXXXXXKISSALIDRVDAMLQKLEKEIDDVDAEIGDRWRLLDRD 424
            A +AYR                ++SSALIDRVDAMLQ LEKEIDDVDA+IGDRWRLLDRD
Sbjct: 641  AMEAYRAARDESDHAAKVAVGDEVSSALIDRVDAMLQNLEKEIDDVDAKIGDRWRLLDRD 700

Query: 423  YDGKVTPEEVAVAAAYLKDTLNKEGVQELISSLSKDRDGKILVEDIVKLGTQKEDVNAAD 244
            YDGKVTPEEVA AA YLKDTL KEG+QELIS+LSKD+DGKI VEDIV+LG++ ED N ++
Sbjct: 701  YDGKVTPEEVAAAALYLKDTLGKEGIQELISNLSKDKDGKIHVEDIVRLGSRNEDANTSE 760



 Score = 70.1 bits (170), Expect(2) = 5e-52
 Identities = 38/80 (47%), Positives = 52/80 (65%)
 Frame = -1

Query: 959 KARLKGSDISQEDVALKEMESSTARDAQEQAPSEMLDKRDQLCXXXXXXXXXXXXXXXXX 780
           +A++K + +SQED+ALKEM   TAR+AQEQA +  ++K++QLC                 
Sbjct: 551 QAKIKETVVSQEDLALKEMTIPTAREAQEQARARAVEKQEQLCELSRALAVLASASSVSR 610

Query: 779 XXXEFMRLVNKEIKLYNSMV 720
              EF+RLVNKEI+LYNSMV
Sbjct: 611 EREEFLRLVNKEIELYNSMV 630



 Score =  211 bits (536), Expect = 6e-52
 Identities = 115/172 (66%), Positives = 125/172 (72%)
 Frame = -3

Query: 1626 TLDNINRPRLVNMCKYMGISPYGTDAYLRYALRKRLQWIKNDDKLIQAEGVDSLSEXXXX 1447
            TLDNI+RPRLVNMCKYMGISP+GTDAYLRY LRKRLQWIKNDD+LIQAEGV+SLSE    
Sbjct: 382  TLDNISRPRLVNMCKYMGISPFGTDAYLRYMLRKRLQWIKNDDRLIQAEGVESLSE---- 437

Query: 1446 XXXXXXXXXXXXXXXXXXXXELRQTVRERGILGLLSVEEMRQQLRDWXXXXXXXXXXXXX 1267
                                ELR+  RERG+LGL SVEEMRQQLRDW             
Sbjct: 438  -------------------AELREDCRERGMLGLRSVEEMRQQLRDWLDLSLNHSVPSSL 478

Query: 1266 XXXSRAFTVSGKLRPEEAVMNTMSSLPDEVVDTVQVTSLPSEDSVSERRRKL 1111
               SRAFTVSGK+RPEEAV  T+SSLPDEVVDTV +T+LPSEDSVSERRRKL
Sbjct: 479  LILSRAFTVSGKVRPEEAVQATLSSLPDEVVDTVGITALPSEDSVSERRRKL 530


>ref|XP_002312206.1| predicted protein [Populus trichocarpa] gi|222852026|gb|EEE89573.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score =  166 bits (420), Expect(2) = 1e-51
 Identities = 88/122 (72%), Positives = 99/122 (81%)
 Frame = -3

Query: 603 AKKAYRXXXXXXXXXXXXXXXXKISSALIDRVDAMLQKLEKEIDDVDAEIGDRWRLLDRD 424
           AKKAY+                KISSALI+RVDAMLQKLEKEIDDVDA+IGDRWRLLDRD
Sbjct: 563 AKKAYKAAREESDQAAETAISDKISSALINRVDAMLQKLEKEIDDVDAKIGDRWRLLDRD 622

Query: 423 YDGKVTPEEVAVAAAYLKDTLNKEGVQELISSLSKDRDGKILVEDIVKLGTQKEDVNAAD 244
           YDGKVTPEEVA AA YLKD L KEG+QELIS+LSKDR+GKILVEDIV+LG++ +D +AA 
Sbjct: 623 YDGKVTPEEVASAAMYLKDHLGKEGIQELISNLSKDREGKILVEDIVRLGSEMKDADAAA 682

Query: 243 EE 238
           EE
Sbjct: 683 EE 684



 Score = 65.1 bits (157), Expect(2) = 1e-51
 Identities = 37/80 (46%), Positives = 49/80 (61%)
 Frame = -1

Query: 959 KARLKGSDISQEDVALKEMESSTARDAQEQAPSEMLDKRDQLCXXXXXXXXXXXXXXXXX 780
           +A++K S  SQ+DVAL+EM   TARDA+EQA ++ L+K +QLC                 
Sbjct: 473 QAKMKESVSSQKDVALEEMSIPTARDAREQAKAKTLEKHEQLCELSRALAVLASASSVSR 532

Query: 779 XXXEFMRLVNKEIKLYNSMV 720
              EF+RLV KEI LYN+MV
Sbjct: 533 EREEFLRLVKKEIDLYNNMV 552



 Score =  204 bits (518), Expect = 7e-50
 Identities = 112/172 (65%), Positives = 124/172 (72%)
 Frame = -3

Query: 1626 TLDNINRPRLVNMCKYMGISPYGTDAYLRYALRKRLQWIKNDDKLIQAEGVDSLSEXXXX 1447
            TLDNI+RPRLVNMCKYMGISPYGTDAYLRY LR+RLQ IK+DDK+IQAEGV+SLSE    
Sbjct: 304  TLDNISRPRLVNMCKYMGISPYGTDAYLRYMLRRRLQEIKSDDKMIQAEGVESLSE---- 359

Query: 1446 XXXXXXXXXXXXXXXXXXXXELRQTVRERGILGLLSVEEMRQQLRDWXXXXXXXXXXXXX 1267
                                ELRQ  R+RG+LGLLSVEEMRQQL DW             
Sbjct: 360  -------------------AELRQACRDRGLLGLLSVEEMRQQLHDWLDLSLNRSVPSSL 400

Query: 1266 XXXSRAFTVSGKLRPEEAVMNTMSSLPDEVVDTVQVTSLPSEDSVSERRRKL 1111
               SRAF++SGK+RPEEAV  T+SSLPDEVVDTV VT+LPSEDSVSERRRKL
Sbjct: 401  LILSRAFSISGKVRPEEAVQATLSSLPDEVVDTVGVTALPSEDSVSERRRKL 452


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