BLASTX nr result

ID: Coptis24_contig00015031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015031
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530166.1| conserved hypothetical protein [Ricinus comm...   128   2e-29
ref|XP_002281204.1| PREDICTED: uncharacterized protein LOC100266...   114   5e-23
ref|XP_002309400.1| predicted protein [Populus trichocarpa] gi|2...   114   5e-23
emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]   114   5e-23
ref|XP_003554456.1| PREDICTED: uncharacterized protein LOC100805...   112   1e-22

>ref|XP_002530166.1| conserved hypothetical protein [Ricinus communis]
           gi|223530327|gb|EEF32221.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 195

 Score =  128 bits (321), Expect(2) = 2e-29
 Identities = 72/123 (58%), Positives = 84/123 (68%), Gaps = 7/123 (5%)
 Frame = -1

Query: 588 FLTLKSGSICYQKDKQKECNKTMSRK-GKRRELDLRLNLSPPRANQENEXXXXXXXXXXX 412
           FL L++G I Y K+ +K   KTMSR+ G   +LDL+LNLSPPRA+   E           
Sbjct: 68  FLNLQTGEIYYTKNTRK---KTMSRRNGNGPKLDLKLNLSPPRADPRVESPNRSATVSPT 124

Query: 411 XXXXSCVSSEHTD------ANSPEATSMILVGCPRCLMYVMLAEEDPKCPKCKSTVLLDF 250
               SCVSSE         +NSPEATSM+LVGCPRCLMYVML+E+DPKCPKCKSTVLLDF
Sbjct: 125 SPPSSCVSSELNQDDTLRYSNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDF 184

Query: 249 LHE 241
           LHE
Sbjct: 185 LHE 187



 Score = 28.5 bits (62), Expect(2) = 2e-29
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = -3

Query: 634 VEVDGTCPLPLGWQRILDLK 575
           +E++   PLPLGWQ+ L+L+
Sbjct: 53  IELEEPFPLPLGWQKFLNLQ 72


>ref|XP_002281204.1| PREDICTED: uncharacterized protein LOC100266492 [Vitis vinifera]
          Length = 120

 Score =  114 bits (284), Expect = 5e-23
 Identities = 61/100 (61%), Positives = 70/100 (70%), Gaps = 6/100 (6%)
 Frame = -1

Query: 522 MSRKGKRRELDLRLNLSPPRANQENEXXXXXXXXXXXXXXXSCVSSEHTD------ANSP 361
           MSR+   + LDL+LNLSPPRAN+  E               SCVSSE         +NSP
Sbjct: 1   MSRRNGPK-LDLKLNLSPPRANRHAESPSRSATLSPTSPPSSCVSSELNQDETLRYSNSP 59

Query: 360 EATSMILVGCPRCLMYVMLAEEDPKCPKCKSTVLLDFLHE 241
           EATSM+LVGCPRCLMYVML+E+DPKCPKCKSTVLLDFLH+
Sbjct: 60  EATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHD 99


>ref|XP_002309400.1| predicted protein [Populus trichocarpa] gi|222855376|gb|EEE92923.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score =  114 bits (284), Expect = 5e-23
 Identities = 61/98 (62%), Positives = 67/98 (68%), Gaps = 6/98 (6%)
 Frame = -1

Query: 516 RKGKRRELDLRLNLSPPRANQENEXXXXXXXXXXXXXXXSCVSSE--HTDA----NSPEA 355
           R G   +LDL+LNLSPPR N   E               SCVSSE  H DA    +SPEA
Sbjct: 4   RNGSLPKLDLKLNLSPPRVNPRVESPGRSATVSPTSPPSSCVSSERSHDDALRYSSSPEA 63

Query: 354 TSMILVGCPRCLMYVMLAEEDPKCPKCKSTVLLDFLHE 241
           TSM+LVGCPRCLMYVML+E DPKCPKCKSTVLLDFLH+
Sbjct: 64  TSMVLVGCPRCLMYVMLSENDPKCPKCKSTVLLDFLHD 101


>emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]
          Length = 281

 Score =  114 bits (284), Expect = 5e-23
 Identities = 61/100 (61%), Positives = 70/100 (70%), Gaps = 6/100 (6%)
 Frame = -1

Query: 522 MSRKGKRRELDLRLNLSPPRANQENEXXXXXXXXXXXXXXXSCVSSEHTD------ANSP 361
           MSR+   + LDL+LNLSPPRAN+  E               SCVSSE         +NSP
Sbjct: 162 MSRRNGPK-LDLKLNLSPPRANRHAESPSRSATLSPTSPPSSCVSSELNQDETLRYSNSP 220

Query: 360 EATSMILVGCPRCLMYVMLAEEDPKCPKCKSTVLLDFLHE 241
           EATSM+LVGCPRCLMYVML+E+DPKCPKCKSTVLLDFLH+
Sbjct: 221 EATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHD 260


>ref|XP_003554456.1| PREDICTED: uncharacterized protein LOC100805043 [Glycine max]
          Length = 109

 Score =  112 bits (280), Expect = 1e-22
 Identities = 60/100 (60%), Positives = 71/100 (71%), Gaps = 6/100 (6%)
 Frame = -1

Query: 522 MSRKGKRR-ELDLRLNLSPPRANQENEXXXXXXXXXXXXXXXSCVSSEHTD-----ANSP 361
           MSR+ +   +LDL+LNLSPPRA++  E               SCVSSE        +NSP
Sbjct: 1   MSRRNESGPKLDLKLNLSPPRADRRLESPTRSATASPTSPPSSCVSSELNQEDKSYSNSP 60

Query: 360 EATSMILVGCPRCLMYVMLAEEDPKCPKCKSTVLLDFLHE 241
           EATSM+LVGCPRCLMYVML+E+DPKCPKCKSTVLLDFLH+
Sbjct: 61  EATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHD 100


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