BLASTX nr result
ID: Coptis24_contig00015022
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015022 (295 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002330185.1| predicted protein [Populus trichocarpa] gi|2... 102 3e-20 emb|CAP08386.1| Ppx-GppA phosphatase protein [Eutrema salsugineum] 96 2e-18 gb|AAC24085.1| Similar to exopolyphosphatase gb|1653871 from Syn... 94 1e-17 ref|NP_001184946.1| uncharacterized protein [Arabidopsis thalian... 94 1e-17 ref|XP_002892489.1| pentatricopeptide repeat-containing protein ... 93 3e-17 >ref|XP_002330185.1| predicted protein [Populus trichocarpa] gi|222871641|gb|EEF08772.1| predicted protein [Populus trichocarpa] Length = 495 Score = 102 bits (254), Expect = 3e-20 Identities = 56/99 (56%), Positives = 75/99 (75%), Gaps = 2/99 (2%) Frame = +3 Query: 3 TIRAIERAVWMGYAQDLMTG--VFSHGEFRRNWKFSRNDLNNVVDNLCESDQKGGDDVRR 176 TIRAIERAV+ GY ++ + G VF + +R WKFSR +L+ VV+ LC ++ + V+R Sbjct: 211 TIRAIERAVFNGYGKECVEGNEVFLR-DCKREWKFSRGELSGVVERLCREGEE--ERVKR 267 Query: 177 NEFFKRRSEFILAGAVLLSEIFEILKIDEMEVSEFALGE 293 + FFKRRSEFI+AG+VLL EIFE + I+EMEVSE+ALGE Sbjct: 268 DGFFKRRSEFIVAGSVLLEEIFEAVGIEEMEVSEYALGE 306 >emb|CAP08386.1| Ppx-GppA phosphatase protein [Eutrema salsugineum] Length = 422 Score = 96.3 bits (238), Expect = 2e-18 Identities = 53/97 (54%), Positives = 68/97 (70%) Frame = +3 Query: 3 TIRAIERAVWMGYAQDLMTGVFSHGEFRRNWKFSRNDLNNVVDNLCESDQKGGDDVRRNE 182 TIRAIE AV+ GY DL F+ ++R+WKF R +L++VV LC + + +RR Sbjct: 223 TIRAIENAVFSGYEADLCQ--FNLEGYKRDWKFGRRELSSVVAKLCSEGDE--EKIRREG 278 Query: 183 FFKRRSEFILAGAVLLSEIFEILKIDEMEVSEFALGE 293 FF RRSEFI+AGAVLL EIF+ L I+EMEVSE+AL E Sbjct: 279 FFNRRSEFIVAGAVLLEEIFKDLGIEEMEVSEYALAE 315 >gb|AAC24085.1| Similar to exopolyphosphatase gb|1653871 from Synechocystis sp. gb|D90917 [Arabidopsis thaliana] Length = 568 Score = 94.0 bits (232), Expect = 1e-17 Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 2/99 (2%) Frame = +3 Query: 3 TIRAIERAVWMGYAQDLMTGVFSHGEFRRNWKFSRNDLNNVVDNLCESDQKGGDD--VRR 176 TIRAIE AV+ GY DL F+ ++R+W+F +L++VV LC GD+ +RR Sbjct: 223 TIRAIENAVFSGYGADLCD--FNLEGYKRDWRFGTRELSSVVAKLCSE----GDEELIRR 276 Query: 177 NEFFKRRSEFILAGAVLLSEIFEILKIDEMEVSEFALGE 293 FFKRRSEFI+AGAVLL EIF+ L I++MEVSE+AL E Sbjct: 277 EGFFKRRSEFIVAGAVLLEEIFKALGIEDMEVSEYALAE 315 >ref|NP_001184946.1| uncharacterized protein [Arabidopsis thaliana] gi|332190291|gb|AEE28412.1| uncharacterized protein [Arabidopsis thaliana] Length = 600 Score = 94.0 bits (232), Expect = 1e-17 Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 2/99 (2%) Frame = +3 Query: 3 TIRAIERAVWMGYAQDLMTGVFSHGEFRRNWKFSRNDLNNVVDNLCESDQKGGDD--VRR 176 TIRAIE AV+ GY DL F+ ++R+W+F +L++VV LC GD+ +RR Sbjct: 223 TIRAIENAVFSGYGADLCD--FNLEGYKRDWRFGTRELSSVVAKLCSE----GDEELIRR 276 Query: 177 NEFFKRRSEFILAGAVLLSEIFEILKIDEMEVSEFALGE 293 FFKRRSEFI+AGAVLL EIF+ L I++MEVSE+AL E Sbjct: 277 EGFFKRRSEFIVAGAVLLEEIFKALGIEDMEVSEYALAE 315 >ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297338331|gb|EFH68748.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 1014 Score = 92.8 bits (229), Expect = 3e-17 Identities = 52/99 (52%), Positives = 69/99 (69%), Gaps = 2/99 (2%) Frame = +3 Query: 3 TIRAIERAVWMGYAQDLMTGVFSHGEFRRNWKFSRNDLNNVVDNLCESDQKGGDD--VRR 176 TIRAIE AV+ GY DL F+ ++R+W+F +L++VV LC GD+ +RR Sbjct: 224 TIRAIENAVFSGYGADLCE--FNLEGYKRDWRFGTRELSSVVAKLCSE----GDEELIRR 277 Query: 177 NEFFKRRSEFILAGAVLLSEIFEILKIDEMEVSEFALGE 293 FFKRRSEFI+AGAVLL EIF+ L I+++EVSE+AL E Sbjct: 278 EGFFKRRSEFIVAGAVLLEEIFKALGIEDLEVSEYALAE 316