BLASTX nr result

ID: Coptis24_contig00015022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015022
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330185.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
emb|CAP08386.1| Ppx-GppA phosphatase protein [Eutrema salsugineum]     96   2e-18
gb|AAC24085.1| Similar to exopolyphosphatase gb|1653871 from Syn...    94   1e-17
ref|NP_001184946.1| uncharacterized protein [Arabidopsis thalian...    94   1e-17
ref|XP_002892489.1| pentatricopeptide repeat-containing protein ...    93   3e-17

>ref|XP_002330185.1| predicted protein [Populus trichocarpa] gi|222871641|gb|EEF08772.1|
           predicted protein [Populus trichocarpa]
          Length = 495

 Score =  102 bits (254), Expect = 3e-20
 Identities = 56/99 (56%), Positives = 75/99 (75%), Gaps = 2/99 (2%)
 Frame = +3

Query: 3   TIRAIERAVWMGYAQDLMTG--VFSHGEFRRNWKFSRNDLNNVVDNLCESDQKGGDDVRR 176
           TIRAIERAV+ GY ++ + G  VF   + +R WKFSR +L+ VV+ LC   ++  + V+R
Sbjct: 211 TIRAIERAVFNGYGKECVEGNEVFLR-DCKREWKFSRGELSGVVERLCREGEE--ERVKR 267

Query: 177 NEFFKRRSEFILAGAVLLSEIFEILKIDEMEVSEFALGE 293
           + FFKRRSEFI+AG+VLL EIFE + I+EMEVSE+ALGE
Sbjct: 268 DGFFKRRSEFIVAGSVLLEEIFEAVGIEEMEVSEYALGE 306


>emb|CAP08386.1| Ppx-GppA phosphatase protein [Eutrema salsugineum]
          Length = 422

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 53/97 (54%), Positives = 68/97 (70%)
 Frame = +3

Query: 3   TIRAIERAVWMGYAQDLMTGVFSHGEFRRNWKFSRNDLNNVVDNLCESDQKGGDDVRRNE 182
           TIRAIE AV+ GY  DL    F+   ++R+WKF R +L++VV  LC    +  + +RR  
Sbjct: 223 TIRAIENAVFSGYEADLCQ--FNLEGYKRDWKFGRRELSSVVAKLCSEGDE--EKIRREG 278

Query: 183 FFKRRSEFILAGAVLLSEIFEILKIDEMEVSEFALGE 293
           FF RRSEFI+AGAVLL EIF+ L I+EMEVSE+AL E
Sbjct: 279 FFNRRSEFIVAGAVLLEEIFKDLGIEEMEVSEYALAE 315


>gb|AAC24085.1| Similar to exopolyphosphatase gb|1653871 from Synechocystis sp.
           gb|D90917 [Arabidopsis thaliana]
          Length = 568

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
 Frame = +3

Query: 3   TIRAIERAVWMGYAQDLMTGVFSHGEFRRNWKFSRNDLNNVVDNLCESDQKGGDD--VRR 176
           TIRAIE AV+ GY  DL    F+   ++R+W+F   +L++VV  LC      GD+  +RR
Sbjct: 223 TIRAIENAVFSGYGADLCD--FNLEGYKRDWRFGTRELSSVVAKLCSE----GDEELIRR 276

Query: 177 NEFFKRRSEFILAGAVLLSEIFEILKIDEMEVSEFALGE 293
             FFKRRSEFI+AGAVLL EIF+ L I++MEVSE+AL E
Sbjct: 277 EGFFKRRSEFIVAGAVLLEEIFKALGIEDMEVSEYALAE 315


>ref|NP_001184946.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332190291|gb|AEE28412.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 600

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
 Frame = +3

Query: 3   TIRAIERAVWMGYAQDLMTGVFSHGEFRRNWKFSRNDLNNVVDNLCESDQKGGDD--VRR 176
           TIRAIE AV+ GY  DL    F+   ++R+W+F   +L++VV  LC      GD+  +RR
Sbjct: 223 TIRAIENAVFSGYGADLCD--FNLEGYKRDWRFGTRELSSVVAKLCSE----GDEELIRR 276

Query: 177 NEFFKRRSEFILAGAVLLSEIFEILKIDEMEVSEFALGE 293
             FFKRRSEFI+AGAVLL EIF+ L I++MEVSE+AL E
Sbjct: 277 EGFFKRRSEFIVAGAVLLEEIFKALGIEDMEVSEYALAE 315


>ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338331|gb|EFH68748.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1014

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 52/99 (52%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
 Frame = +3

Query: 3   TIRAIERAVWMGYAQDLMTGVFSHGEFRRNWKFSRNDLNNVVDNLCESDQKGGDD--VRR 176
           TIRAIE AV+ GY  DL    F+   ++R+W+F   +L++VV  LC      GD+  +RR
Sbjct: 224 TIRAIENAVFSGYGADLCE--FNLEGYKRDWRFGTRELSSVVAKLCSE----GDEELIRR 277

Query: 177 NEFFKRRSEFILAGAVLLSEIFEILKIDEMEVSEFALGE 293
             FFKRRSEFI+AGAVLL EIF+ L I+++EVSE+AL E
Sbjct: 278 EGFFKRRSEFIVAGAVLLEEIFKALGIEDLEVSEYALAE 316


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