BLASTX nr result

ID: Coptis24_contig00015021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015021
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAP08388.2| Ppx-GppA phosphatase protein (exopolyphosphatase...   113   2e-31
ref|NP_001184946.1| uncharacterized protein [Arabidopsis thalian...   100   2e-30
gb|AAC24085.1| Similar to exopolyphosphatase gb|1653871 from Syn...   100   2e-30
ref|XP_002892489.1| pentatricopeptide repeat-containing protein ...   100   3e-30
ref|XP_002278296.1| PREDICTED: exopolyphosphatase [Vitis vinifer...    97   7e-30

>emb|CAP08388.2| Ppx-GppA phosphatase protein (exopolyphosphatase) [Lupinus albus]
          Length = 520

 Score =  113 bits (282), Expect(2) = 2e-31
 Identities = 59/99 (59%), Positives = 71/99 (71%)
 Frame = +3

Query: 1269 RVGFLGVLQFLPVYDKIVLTVDSSGGSTEXXXXXXXXXXXAVSLKLGHVSLTEMFGKCWE 1448
            R+G+LG+LQFLPVYDK+ LTVD  GGSTE           A SL LGHV LT+ F     
Sbjct: 126  RLGYLGMLQFLPVYDKLALTVDIGGGSTEFVVGFKGKSIFATSLNLGHVVLTQRFTNKDT 185

Query: 1449 VGKMREYIRSVVFQSGLVEKVGEIGFEVVVGSSGTIRAI 1565
            V +MRE+IRSV+ +SG+VEK+ E GFE+ VGSSGTIRAI
Sbjct: 186  VPRMREHIRSVIHESGVVEKIKEHGFEIAVGSSGTIRAI 224



 Score = 50.4 bits (119), Expect(2) = 2e-31
 Identities = 29/88 (32%), Positives = 49/88 (55%)
 Frame = +2

Query: 1022 KEKVVLGCGMNQNKPTITLESQQRAITALRKFTHLLNNAQHVVIDPKFVATSAVREAVSK 1201
            K +V+LG  +     +I+  S   A+ AL  F ++L +        + VAT+AVR+A + 
Sbjct: 42   KHRVLLGRDVTPTPYSISPHSTIHALEALSDFHNILQSHHVAQAQTRCVATAAVRDAHNT 101

Query: 1202 GEFLDKVSEEVNVKVDFLSGEAEGRLSW 1285
              F++ +S  + +KVD LSG+ E RL +
Sbjct: 102  IAFVNSISNNIGMKVDVLSGKEEARLGY 129


>ref|NP_001184946.1| uncharacterized protein [Arabidopsis thaliana]
            gi|332190291|gb|AEE28412.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 600

 Score =  100 bits (250), Expect(2) = 2e-30
 Identities = 60/102 (58%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
 Frame = +3

Query: 1269 RVGFLGVLQFLPVYDKIVLTVDSSGGSTEXXXXXXXXXXXAVSLKLGHVSLTEMFGKCW- 1445
            R+ +LGVLQFLPV++K VL VD  GGSTE           AVSLKLGHV+LT+MF K   
Sbjct: 127  RLVYLGVLQFLPVFEKSVLCVDIGGGSTEFVVGKCGDVKLAVSLKLGHVNLTQMFMKNGI 186

Query: 1446 EVGKMREYIRSVVFQSGLVEKVGEI-GFEVVVGSSGTIRAIE 1568
             + +MR+YIR  + +S L EK+ E  GFEVVVGSSGTIRAIE
Sbjct: 187  GLKEMRDYIRHAIDESRLAEKLNESDGFEVVVGSSGTIRAIE 228



 Score = 60.1 bits (144), Expect(2) = 2e-30
 Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = +2

Query: 1019 VKEKVVLGCGMNQNKPTITLESQQRAITALRKFTHLLNNAQHVVIDP-KFVATSAVREAV 1195
            +KE VVL     ++  +I+ +SQ RA+ +LRKF  L+ +  HV  D  + VAT A+R A 
Sbjct: 45   LKEPVVLS---RESPTSISSQSQARALQSLRKFKSLILS-HHVSGDRIRCVATEALRRAE 100

Query: 1196 SKGEFLDKVSEEVNVKVDFLSGEAEGRL 1279
            ++ EF+D V E+V +KVD LSGE E RL
Sbjct: 101  NQEEFVDAVFEDVGLKVDVLSGEEEARL 128


>gb|AAC24085.1| Similar to exopolyphosphatase gb|1653871 from Synechocystis sp.
            gb|D90917 [Arabidopsis thaliana]
          Length = 568

 Score =  100 bits (250), Expect(2) = 2e-30
 Identities = 60/102 (58%), Positives = 72/102 (70%), Gaps = 2/102 (1%)
 Frame = +3

Query: 1269 RVGFLGVLQFLPVYDKIVLTVDSSGGSTEXXXXXXXXXXXAVSLKLGHVSLTEMFGKCW- 1445
            R+ +LGVLQFLPV++K VL VD  GGSTE           AVSLKLGHV+LT+MF K   
Sbjct: 127  RLVYLGVLQFLPVFEKSVLCVDIGGGSTEFVVGKCGDVKLAVSLKLGHVNLTQMFMKNGI 186

Query: 1446 EVGKMREYIRSVVFQSGLVEKVGEI-GFEVVVGSSGTIRAIE 1568
             + +MR+YIR  + +S L EK+ E  GFEVVVGSSGTIRAIE
Sbjct: 187  GLKEMRDYIRHAIDESRLAEKLNESDGFEVVVGSSGTIRAIE 228



 Score = 60.1 bits (144), Expect(2) = 2e-30
 Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = +2

Query: 1019 VKEKVVLGCGMNQNKPTITLESQQRAITALRKFTHLLNNAQHVVIDP-KFVATSAVREAV 1195
            +KE VVL     ++  +I+ +SQ RA+ +LRKF  L+ +  HV  D  + VAT A+R A 
Sbjct: 45   LKEPVVLS---RESPTSISSQSQARALQSLRKFKSLILS-HHVSGDRIRCVATEALRRAE 100

Query: 1196 SKGEFLDKVSEEVNVKVDFLSGEAEGRL 1279
            ++ EF+D V E+V +KVD LSGE E RL
Sbjct: 101  NQEEFVDAVFEDVGLKVDVLSGEEEARL 128


>ref|XP_002892489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297338331|gb|EFH68748.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1014

 Score =  100 bits (248), Expect(2) = 3e-30
 Identities = 58/103 (56%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
 Frame = +3

Query: 1269 RVGFLGVLQFLPVYDKIVLTVDSSGGSTEXXXXXXXXXXXAVSLKLGHVSLTEMFGKCWE 1448
            R+ +LGVLQFLPV++K VL VD  GGSTE           AVSLKLGHV+LT+MF K   
Sbjct: 127  RLVYLGVLQFLPVFEKSVLCVDIGGGSTEFVVGKCGDVKLAVSLKLGHVNLTQMFMKNGG 186

Query: 1449 VG--KMREYIRSVVFQSGLVEKVGEI-GFEVVVGSSGTIRAIE 1568
            +G  +MR+YIR  + +S L +++ E  GFE+VVGSSGTIRAIE
Sbjct: 187  IGLKEMRDYIRHAIDESRLADRLKESNGFEMVVGSSGTIRAIE 229



 Score = 60.1 bits (144), Expect(2) = 3e-30
 Identities = 37/87 (42%), Positives = 55/87 (63%)
 Frame = +2

Query: 1019 VKEKVVLGCGMNQNKPTITLESQQRAITALRKFTHLLNNAQHVVIDPKFVATSAVREAVS 1198
            ++E VVL     ++  +I+ +SQ RA+ +LRKF  L+ +    V   + VAT A+R A +
Sbjct: 45   LREPVVLS---RESPTSISSQSQARALQSLRKFKSLILSHNVSVDRIRCVATEALRRAEN 101

Query: 1199 KGEFLDKVSEEVNVKVDFLSGEAEGRL 1279
            + EF+D V E+V +KVD LSGE E RL
Sbjct: 102  QKEFVDAVFEDVGLKVDVLSGEEEARL 128


>ref|XP_002278296.1| PREDICTED: exopolyphosphatase [Vitis vinifera]
            gi|296089751|emb|CBI39570.3| unnamed protein product
            [Vitis vinifera]
          Length = 572

 Score = 97.1 bits (240), Expect(2) = 7e-30
 Identities = 48/100 (48%), Positives = 67/100 (67%)
 Frame = +3

Query: 1269 RVGFLGVLQFLPVYDKIVLTVDSSGGSTEXXXXXXXXXXXAVSLKLGHVSLTEMFGKCWE 1448
            R+ +LG LQFLP+Y+K  L +D  GGSTE             S+KLGHV+LT+ F    E
Sbjct: 128  RLIYLGALQFLPIYEKTALVIDIGGGSTEFLLGQKGKAIFGTSVKLGHVNLTQKFVNHNE 187

Query: 1449 VGKMREYIRSVVFQSGLVEKVGEIGFEVVVGSSGTIRAIE 1568
            + +MR +IRS++ Q G+VEK+   GFE+ VGSSGT+++IE
Sbjct: 188  ILQMRSHIRSILRQCGIVEKIKHHGFEIAVGSSGTVQSIE 227



 Score = 61.6 bits (148), Expect(2) = 7e-30
 Identities = 39/87 (44%), Positives = 54/87 (62%)
 Frame = +2

Query: 1019 VKEKVVLGCGMNQNKPTITLESQQRAITALRKFTHLLNNAQHVVIDPKFVATSAVREAVS 1198
            +KE VVLG           ++SQ RAI AL++F + L N  H +   + VAT+AVREA +
Sbjct: 47   LKEPVVLG--RQAASAAAAVDSQLRAIEALKEFRNFLQN--HEIHRHRTVATAAVREAGN 102

Query: 1199 KGEFLDKVSEEVNVKVDFLSGEAEGRL 1279
            + EFL +V +EV  +V+ LSGE E RL
Sbjct: 103  QAEFLRRVRDEVGFEVEVLSGEEEARL 129


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