BLASTX nr result

ID: Coptis24_contig00015020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015020
         (1319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]...   450   e-124
ref|XP_002512481.1| syntaxin, putative [Ricinus communis] gi|223...   434   e-119
ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|...   432   e-118
dbj|BAH03478.1| syntaxin [Nicotiana tabacum]                          428   e-117
ref|XP_002273927.1| PREDICTED: syntaxin-41 [Vitis vinifera] gi|2...   427   e-117

>ref|XP_002282882.2| PREDICTED: syntaxin-43-like [Vitis vinifera]
            gi|296089745|emb|CBI39564.3| unnamed protein product
            [Vitis vinifera]
          Length = 327

 Score =  450 bits (1157), Expect = e-124
 Identities = 232/276 (84%), Positives = 255/276 (92%), Gaps = 2/276 (0%)
 Frame = -2

Query: 1270 VIEM--SSIFPQKRSYVPLSTEDPGSSSNGGALTVGLPPAWVDVSEEIAANVQRARTKMA 1097
            VIE+  +S+    RSYVPLSTEDPG+SS G ALTVGLPPAWVDVSEEI+ANVQRARTKMA
Sbjct: 42   VIELVSTSLLNPNRSYVPLSTEDPGNSSKG-ALTVGLPPAWVDVSEEISANVQRARTKMA 100

Query: 1096 ELGKAHAKALMPSFGDGREDQHMIEALTHEVTDLLRRSEKRLQKLSTAGPSEDSNVRKNV 917
            EL KAHAKALMPSFGDG+EDQH IE+LT E+TDLL++SEKRLQKLS+ GPSEDSNVRKNV
Sbjct: 101  ELVKAHAKALMPSFGDGKEDQHRIESLTQEITDLLKKSEKRLQKLSSTGPSEDSNVRKNV 160

Query: 916  QRSLATDLQNLSVDLRKKQSMYLKRLRQQKEGQDGVDLEMNLNENRSQLEVDDFSDLGFN 737
            QRSLATDLQNLS++LRKKQS YLKRLRQQKEGQDGVDLEMNLN N+S  E D+FSDLGFN
Sbjct: 161  QRSLATDLQNLSMELRKKQSSYLKRLRQQKEGQDGVDLEMNLNGNKSLREDDEFSDLGFN 220

Query: 736  EHQMSKLKKSEAFTVEREKEINQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNVQNVA 557
            EHQM+KLKK+EAFT ERE+EI QVVESVNELAQIMKDLSVLVIDQGTIVDRIDYN+QNVA
Sbjct: 221  EHQMTKLKKNEAFTAEREREIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVA 280

Query: 556  TSVEQGFKQLEKAERTQRKGGMVWCATILVIMCFVM 449
             SVE+GFKQL+KAERTQ+KGGMV CAT+LVIMCFVM
Sbjct: 281  ASVEEGFKQLQKAERTQKKGGMVMCATVLVIMCFVM 316


>ref|XP_002512481.1| syntaxin, putative [Ricinus communis] gi|223548442|gb|EEF49933.1|
            syntaxin, putative [Ricinus communis]
          Length = 323

 Score =  434 bits (1116), Expect = e-119
 Identities = 221/275 (80%), Positives = 250/275 (90%), Gaps = 1/275 (0%)
 Frame = -2

Query: 1270 VIEM-SSIFPQKRSYVPLSTEDPGSSSNGGALTVGLPPAWVDVSEEIAANVQRARTKMAE 1094
            VIE+ S+   Q RSY PLS EDPG+SS G ALTVGLPPAWVDVSEEIA NVQRAR KM E
Sbjct: 39   VIELVSTSLLQNRSYAPLSAEDPGNSSKG-ALTVGLPPAWVDVSEEIATNVQRARIKMTE 97

Query: 1093 LGKAHAKALMPSFGDGREDQHMIEALTHEVTDLLRRSEKRLQKLSTAGPSEDSNVRKNVQ 914
            L KAHAKALMPSFGDG+EDQ MIE LTHE+TDL+R+SEK+L++LS AGPSEDSNVRKNVQ
Sbjct: 98   LAKAHAKALMPSFGDGKEDQRMIEVLTHEITDLIRKSEKKLRRLSAAGPSEDSNVRKNVQ 157

Query: 913  RSLATDLQNLSVDLRKKQSMYLKRLRQQKEGQDGVDLEMNLNENRSQLEVDDFSDLGFNE 734
            RSLATDLQNLS++LRKKQS YLKRLRQQKEGQDGVDLEMNLN ++S+++ DD  D+ F+E
Sbjct: 158  RSLATDLQNLSMELRKKQSTYLKRLRQQKEGQDGVDLEMNLNGSKSRIDDDDLDDMVFSE 217

Query: 733  HQMSKLKKSEAFTVEREKEINQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNVQNVAT 554
            HQM+KLKKSEAFTVERE+EI QVVESVNELAQIMKDLSVLVIDQGTIVDRIDYN+QNVAT
Sbjct: 218  HQMAKLKKSEAFTVEREREIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVAT 277

Query: 553  SVEQGFKQLEKAERTQRKGGMVWCATILVIMCFVM 449
            +VE+G KQL+KAERTQ++GGMV CAT+LVIMCF+M
Sbjct: 278  TVEEGLKQLQKAERTQKQGGMVMCATVLVIMCFIM 312


>ref|XP_003591195.1| Syntaxin [Medicago truncatula] gi|355480243|gb|AES61446.1| Syntaxin
            [Medicago truncatula]
          Length = 376

 Score =  432 bits (1110), Expect = e-118
 Identities = 220/277 (79%), Positives = 251/277 (90%), Gaps = 3/277 (1%)
 Frame = -2

Query: 1270 VIEM--SSIFPQKRSYVPLSTEDPGSSSNG-GALTVGLPPAWVDVSEEIAANVQRARTKM 1100
            VIE+  +S+    RSY PLST+DPG SS G   +TVGLPPAWVDVSEEI+ANVQRARTKM
Sbjct: 38   VIELVSTSLLNPNRSYAPLSTDDPGGSSKGLNPITVGLPPAWVDVSEEISANVQRARTKM 97

Query: 1099 AELGKAHAKALMPSFGDGREDQHMIEALTHEVTDLLRRSEKRLQKLSTAGPSEDSNVRKN 920
            AEL KAHAKALMPSFGDG++DQH IE+LTHEVTDL++RSEKRL++L++AGPSEDSNVRKN
Sbjct: 98   AELSKAHAKALMPSFGDGKDDQHAIESLTHEVTDLIKRSEKRLRRLASAGPSEDSNVRKN 157

Query: 919  VQRSLATDLQNLSVDLRKKQSMYLKRLRQQKEGQDGVDLEMNLNENRSQLEVDDFSDLGF 740
            VQRSLATDLQ+LSVDLRKKQS YLKRLRQQKEG DGVDLE+N+N ++S+ E DD  ++ F
Sbjct: 158  VQRSLATDLQSLSVDLRKKQSTYLKRLRQQKEGHDGVDLEINMNGSKSKYEDDDLDNMIF 217

Query: 739  NEHQMSKLKKSEAFTVEREKEINQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNVQNV 560
            NEHQM+KLKKSEAFTVEREKEI QVVESVNELAQIMKDLSVLVIDQGTIVDRIDYN+QNV
Sbjct: 218  NEHQMAKLKKSEAFTVEREKEIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNV 277

Query: 559  ATSVEQGFKQLEKAERTQRKGGMVWCATILVIMCFVM 449
            AT+VE G KQL+KAERTQ+KGGMV CA++L+IMCFVM
Sbjct: 278  ATTVEDGLKQLQKAERTQKKGGMVMCASVLLIMCFVM 314


>dbj|BAH03478.1| syntaxin [Nicotiana tabacum]
          Length = 324

 Score =  428 bits (1101), Expect = e-117
 Identities = 220/276 (79%), Positives = 247/276 (89%), Gaps = 2/276 (0%)
 Frame = -2

Query: 1270 VIEMS--SIFPQKRSYVPLSTEDPGSSSNGGALTVGLPPAWVDVSEEIAANVQRARTKMA 1097
            VIE++  S+    RSY PLSTEDPG+SSNG  +TVGLPPAWVDVSEEI  NVQR RTKMA
Sbjct: 39   VIELATTSLLNSNRSYAPLSTEDPGTSSNG-PVTVGLPPAWVDVSEEITGNVQRVRTKMA 97

Query: 1096 ELGKAHAKALMPSFGDGREDQHMIEALTHEVTDLLRRSEKRLQKLSTAGPSEDSNVRKNV 917
            EL KAHAKALMPSFGDG+EDQ  IEALTHE+T LL+RSEK+LQ+LS AGPSEDSNVRKNV
Sbjct: 98   ELAKAHAKALMPSFGDGKEDQRRIEALTHEITGLLKRSEKKLQRLSAAGPSEDSNVRKNV 157

Query: 916  QRSLATDLQNLSVDLRKKQSMYLKRLRQQKEGQDGVDLEMNLNENRSQLEVDDFSDLGFN 737
            QRSLATDLQ+LS++LRKKQS YLKRL+QQKEG DGVDLEMNLN + S+ + DD  DLGFN
Sbjct: 158  QRSLATDLQSLSMELRKKQSTYLKRLQQQKEGPDGVDLEMNLNGSHSRRDDDDLDDLGFN 217

Query: 736  EHQMSKLKKSEAFTVEREKEINQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNVQNVA 557
            EHQM+KLKKSEAFTVERE+EI QVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNVQNVA
Sbjct: 218  EHQMAKLKKSEAFTVEREREIQQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNVQNVA 277

Query: 556  TSVEQGFKQLEKAERTQRKGGMVWCATILVIMCFVM 449
            ++VE+G KQL+KAER+Q++GGMV CAT LVIMCF+M
Sbjct: 278  STVEEGLKQLQKAERSQKQGGMVMCATALVIMCFIM 313


>ref|XP_002273927.1| PREDICTED: syntaxin-41 [Vitis vinifera] gi|297743940|emb|CBI36910.3|
            unnamed protein product [Vitis vinifera]
          Length = 318

 Score =  427 bits (1099), Expect = e-117
 Identities = 223/277 (80%), Positives = 246/277 (88%), Gaps = 3/277 (1%)
 Frame = -2

Query: 1270 VIEMSS--IFPQKRS-YVPLSTEDPGSSSNGGALTVGLPPAWVDVSEEIAANVQRARTKM 1100
            VIEM+S  +F   RS Y PLSTEDPG SS   A TVGLPPAWVDVSEE+AAN+QR+R KM
Sbjct: 32   VIEMASTSLFHSNRSSYTPLSTEDPGPSSKD-AFTVGLPPAWVDVSEEVAANIQRSRVKM 90

Query: 1099 AELGKAHAKALMPSFGDGREDQHMIEALTHEVTDLLRRSEKRLQKLSTAGPSEDSNVRKN 920
            AEL KA AKALMPSF DG+EDQ  IE+LT E+TDLL+RSEKRLQKLS  GPSEDSNVRKN
Sbjct: 91   AELVKAQAKALMPSFEDGKEDQRKIESLTQEITDLLKRSEKRLQKLSARGPSEDSNVRKN 150

Query: 919  VQRSLATDLQNLSVDLRKKQSMYLKRLRQQKEGQDGVDLEMNLNENRSQLEVDDFSDLGF 740
            VQRSLATDLQNLS++LRK+QS YLKRLRQQKEG DGVDLEMNLNEN+ +L+ D+F D+GF
Sbjct: 151  VQRSLATDLQNLSLELRKRQSTYLKRLRQQKEGHDGVDLEMNLNENKFRLDDDEFGDMGF 210

Query: 739  NEHQMSKLKKSEAFTVEREKEINQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNVQNV 560
            NEHQM+KLKKSE FT EREKEI QVVESVNELAQIMKDLSVLVIDQGTIVDRIDYN+Q+V
Sbjct: 211  NEHQMAKLKKSEKFTAEREKEIRQVVESVNELAQIMKDLSVLVIDQGTIVDRIDYNIQSV 270

Query: 559  ATSVEQGFKQLEKAERTQRKGGMVWCATILVIMCFVM 449
            + SVE+GFKQLEKAERTQRKGGMV CATILVIMCF+M
Sbjct: 271  SASVEEGFKQLEKAERTQRKGGMVTCATILVIMCFIM 307


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