BLASTX nr result
ID: Coptis24_contig00015007
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015007 (372 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-conta... 152 3e-35 emb|CBI32873.3| unnamed protein product [Vitis vinifera] 140 1e-31 ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|2... 140 1e-31 ref|XP_002533583.1| zinc finger protein, putative [Ricinus commu... 139 2e-31 ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersi... 135 4e-30 >ref|XP_002278827.1| PREDICTED: zinc finger and SCAN domain-containing protein 10-like [Vitis vinifera] Length = 370 Score = 152 bits (384), Expect = 3e-35 Identities = 71/113 (62%), Positives = 86/113 (76%) Frame = +2 Query: 32 ENKTRSTPVIFRDIRRYYCDYCGISRSKKCLLTSHLLSNHKXXXXXXXXXXXXVDKEGTK 211 E R P IFRD+RRY+CDYCG+ RSKK L+ +H+LS+HK +KEG K Sbjct: 3 ERGERKEP-IFRDVRRYFCDYCGLCRSKKALIRAHMLSHHKEEMEGQKVHNNE-EKEGEK 60 Query: 212 SNTCEECGASFRKPAYLKEHIRTHSNERSFACPVDDCKSSYRRKDHLTRHLLK 370 SN CEECGASF+KPAYLK+H+++HS ER F CPVDDC+SSYRRKDHLTRHLL+ Sbjct: 61 SNACEECGASFKKPAYLKQHMQSHSLERPFTCPVDDCQSSYRRKDHLTRHLLQ 113 >emb|CBI32873.3| unnamed protein product [Vitis vinifera] Length = 390 Score = 140 bits (353), Expect = 1e-31 Identities = 71/133 (53%), Positives = 86/133 (64%), Gaps = 20/133 (15%) Frame = +2 Query: 32 ENKTRSTPVIFRDIRRYYCDYCGISRSKKCLLTSHLLSNHKXXXXXXXXXXXXVDKEGTK 211 E R P IFRD+RRY+CDYCG+ RSKK L+ +H+LS+HK +KEG K Sbjct: 3 ERGERKEP-IFRDVRRYFCDYCGLCRSKKALIRAHMLSHHKEEMEGQKVHNNE-EKEGEK 60 Query: 212 SNTCEECGASFRKPAYLKEHIRTHS--------------------NERSFACPVDDCKSS 331 SN CEECGASF+KPAYLK+H+++HS ER F CPVDDC+SS Sbjct: 61 SNACEECGASFKKPAYLKQHMQSHSLEALNFFGSSIKRPQSRTTCFERPFTCPVDDCQSS 120 Query: 332 YRRKDHLTRHLLK 370 YRRKDHLTRHLL+ Sbjct: 121 YRRKDHLTRHLLQ 133 >ref|XP_002327353.1| predicted protein [Populus trichocarpa] gi|222835723|gb|EEE74158.1| predicted protein [Populus trichocarpa] Length = 335 Score = 140 bits (353), Expect = 1e-31 Identities = 66/102 (64%), Positives = 77/102 (75%) Frame = +2 Query: 65 RDIRRYYCDYCGISRSKKCLLTSHLLSNHKXXXXXXXXXXXXVDKEGTKSNTCEECGASF 244 RDIRRYYCDYCGI RSKK L+TSH+L++HK KEG KSNTCE CGASF Sbjct: 1 RDIRRYYCDYCGICRSKKSLITSHVLTHHKEEMDEESVDGDE-GKEGVKSNTCENCGASF 59 Query: 245 RKPAYLKEHIRTHSNERSFACPVDDCKSSYRRKDHLTRHLLK 370 +KPAYL +H+++HS ER F C DDC +SYRRKDHLTRHLL+ Sbjct: 60 KKPAYLIQHMQSHSLERPFKCLFDDCHASYRRKDHLTRHLLQ 101 >ref|XP_002533583.1| zinc finger protein, putative [Ricinus communis] gi|223526542|gb|EEF28801.1| zinc finger protein, putative [Ricinus communis] Length = 367 Score = 139 bits (351), Expect = 2e-31 Identities = 63/103 (61%), Positives = 79/103 (76%) Frame = +2 Query: 59 IFRDIRRYYCDYCGISRSKKCLLTSHLLSNHKXXXXXXXXXXXXVDKEGTKSNTCEECGA 238 IFRDIRRY+CDYCGI RSKK L+TSH+ ++HK V+ +G KSNTC ECGA Sbjct: 13 IFRDIRRYFCDYCGICRSKKSLITSHIQTHHKEEMNKDKSDEG-VEADGVKSNTCAECGA 71 Query: 239 SFRKPAYLKEHIRTHSNERSFACPVDDCKSSYRRKDHLTRHLL 367 +F+K AYL++H+R+HS ER + C VDDC++SYRRKDHL RHLL Sbjct: 72 NFKKAAYLRQHMRSHSLERPYVCSVDDCQASYRRKDHLNRHLL 114 >ref|NP_001234471.1| transcription factor IIIA [Solanum lycopersicum] gi|115279797|gb|ABI85391.1| transcription factor IIIA [Solanum lycopersicum] gi|115279800|gb|ABI85393.1| transcription factor IIIA [Solanum lycopersicum] Length = 372 Score = 135 bits (340), Expect = 4e-30 Identities = 62/115 (53%), Positives = 85/115 (73%) Frame = +2 Query: 23 EIEENKTRSTPVIFRDIRRYYCDYCGISRSKKCLLTSHLLSNHKXXXXXXXXXXXXVDKE 202 E+ E K V+FRDIRRYYC++CG+ RSKK L++SH+ S+H+ + + Sbjct: 3 EVGEEKRE---VVFRDIRRYYCEFCGLCRSKKSLISSHIQSHHQDVIESLKDDATE-NAK 58 Query: 203 GTKSNTCEECGASFRKPAYLKEHIRTHSNERSFACPVDDCKSSYRRKDHLTRHLL 367 G+K N CEECGA+F+KPA+LK+H+++HS ER F C +DDC+SSYRRKDHL+RHLL Sbjct: 59 GSKMNICEECGATFQKPAHLKQHLQSHSLERPFVCHIDDCQSSYRRKDHLSRHLL 113