BLASTX nr result
ID: Coptis24_contig00015004
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015004 (1012 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis... 245 1e-62 ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis... 242 9e-62 ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|2... 233 6e-59 gb|ABK94888.1| unknown [Populus trichocarpa] 232 1e-58 ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|2... 230 4e-58 >ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera] gi|296089330|emb|CBI39102.3| unnamed protein product [Vitis vinifera] Length = 200 Score = 245 bits (625), Expect = 1e-62 Identities = 128/198 (64%), Positives = 151/198 (76%), Gaps = 8/198 (4%) Frame = -3 Query: 890 MPKVYPNAVAPQALKPA-----SDGQVQVLTVWKKSLLFNCKGFTVFDAKGNLVFRVDNY 726 M KVYPNA A + G VLTVWKKSLLFNC GFTVFD KGNLVFRVDNY Sbjct: 1 MTKVYPNATAASSGSEGVKLCIGGGDPAVLTVWKKSLLFNCSGFTVFDGKGNLVFRVDNY 60 Query: 725 LCSNKTEILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTVKKQVNLLNSRSLA 546 + NK EI+LMDA+GKPLLTIRRK+L+L DNW+V+DGET NP F ++K +NLL+S+SLA Sbjct: 61 VAGNKGEIVLMDASGKPLLTIRRKRLSLGDNWLVYDGETAANPRFQMRKHLNLLSSKSLA 120 Query: 545 HVSVGSNNNV---LYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXXXXXXXXFRLVVQ 375 VS GS++++ +Y+IEGSYSQRCCAVYDE+R+ VAEIKRKE FRL+VQ Sbjct: 121 RVSGGSSSSMRKAMYEIEGSYSQRCCAVYDERRRCVAEIKRKEAMAGVALGVDVFRLIVQ 180 Query: 374 PEMDSTVAMALVILLDQM 321 PEMD+ VAMALVILLDQM Sbjct: 181 PEMDTPVAMALVILLDQM 198 >ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera] gi|147770903|emb|CAN65231.1| hypothetical protein VITISV_007600 [Vitis vinifera] gi|239056173|emb|CAQ58606.1| unknown gene [Vitis vinifera] gi|239056193|emb|CAQ58630.1| Unknown gene [Vitis vinifera] Length = 216 Score = 242 bits (618), Expect = 9e-62 Identities = 134/213 (62%), Positives = 149/213 (69%), Gaps = 20/213 (9%) Frame = -3 Query: 890 MPKVYPNAVAPQALKPASDG---------QVQVLTVWKKSLLFNCKGFTVFDAKGNLVFR 738 M KVYPNA A S+G VLTVWKKSLLFNC GFTVFD KGNLVFR Sbjct: 1 MTKVYPNATAASC---GSEGVNLCIGVGRDAAVLTVWKKSLLFNCNGFTVFDGKGNLVFR 57 Query: 737 VDNYLCSNKTEILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTVKKQVNLLNS 558 VDNY+ +K EI+LMDA+GKPLLTIRRK+L+L DNW+V+DGET NP F V+K NLLNS Sbjct: 58 VDNYVAGHKGEIVLMDASGKPLLTIRRKRLSLGDNWMVYDGETAENPRFQVRKHANLLNS 117 Query: 557 RSLAHVSVG-----------SNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 411 +SLA VS G S N +Y+IEGSYSQRCCAVYDE R+ VAEIKRKE Sbjct: 118 KSLARVSGGGGAGGSSSSSSSPRNAMYEIEGSYSQRCCAVYDETRRCVAEIKRKEAVAGV 177 Query: 410 XXXXXXFRLVVQPEMDSTVAMALVILLDQMCGS 312 FRLVVQPEMD+ VAMALVILLDQM GS Sbjct: 178 ALGVDVFRLVVQPEMDTPVAMALVILLDQMFGS 210 >ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|222868327|gb|EEF05458.1| predicted protein [Populus trichocarpa] Length = 207 Score = 233 bits (594), Expect = 6e-59 Identities = 127/207 (61%), Positives = 153/207 (73%), Gaps = 17/207 (8%) Frame = -3 Query: 890 MPKVYPNAVAPQA---------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDAKGN 750 M KVYPN VAP LKPA++ VLTVWKKSLLFNC GFTV+D +GN Sbjct: 1 MTKVYPN-VAPTTTNKKQQLFNLKPANNALDVDHAVVLTVWKKSLLFNCHGFTVYDGRGN 59 Query: 749 LVFRVDNYLCS--NKTEILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTVKKQ 576 LVFRVDNY+ + N EI+LMDA GKPLLTIRRK+L+L DNW+V++GET NP F VKK Sbjct: 60 LVFRVDNYMATSGNNGEIVLMDAAGKPLLTIRRKRLSLGDNWLVYEGETTTNPRFLVKKH 119 Query: 575 VNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXXXXX 402 VN+LN++ LAHVS GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE Sbjct: 120 VNILNTKCLAHVSPASGSNKNVVYEIEGSYAQRCCAVYDEKKRRVAEIKQKESVGGVAFG 179 Query: 401 XXXFRLVVQPEMDSTVAMALVILLDQM 321 FRL+V PEM +++AMA+VILLDQM Sbjct: 180 VDVFRLIVGPEMGTSMAMAMVILLDQM 206 >gb|ABK94888.1| unknown [Populus trichocarpa] Length = 218 Score = 232 bits (591), Expect = 1e-58 Identities = 126/213 (59%), Positives = 159/213 (74%), Gaps = 20/213 (9%) Frame = -3 Query: 890 MPKVYPNAVAPQA------------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDA 759 M KVYPN VAP A LK +++ VLTVWKKSLLFNC GFTVFD+ Sbjct: 1 MTKVYPN-VAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDS 59 Query: 758 KGNLVFRVDNYLCSNKT--EILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTV 585 KGNL+FRVDNY+ ++ + EI+LMDA GKPLLT+RRK+L+L D+W+V+DGET +NP F+V Sbjct: 60 KGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSV 119 Query: 584 KKQVNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 411 KK V++LN + LAHVS GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE Sbjct: 120 KKHVSILNKKCLAHVSQAAGSNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERVGGV 179 Query: 410 XXXXXXFRLVVQPEMDSTVAMALVILLDQMCGS 312 FRL+V PE+DS++AMA+VI+LDQM GS Sbjct: 180 AFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFGS 212 >ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|222833453|gb|EEE71930.1| predicted protein [Populus trichocarpa] Length = 211 Score = 230 bits (587), Expect = 4e-58 Identities = 125/212 (58%), Positives = 158/212 (74%), Gaps = 20/212 (9%) Frame = -3 Query: 890 MPKVYPNAVAPQA------------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDA 759 M KVYPN VAP A LK +++ VLTVWKKSLLFNC GFTVFD+ Sbjct: 1 MTKVYPN-VAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDS 59 Query: 758 KGNLVFRVDNYLCSNKT--EILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTV 585 KGNL+FRVDNY+ ++ + EI+LMDA GKPLLT+RRK+L+L D+W+V+DGET +NP F+V Sbjct: 60 KGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSV 119 Query: 584 KKQVNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 411 KK V++LN + LAHVS GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE Sbjct: 120 KKHVSILNKKCLAHVSQAAGSNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERVGGV 179 Query: 410 XXXXXXFRLVVQPEMDSTVAMALVILLDQMCG 315 FRL+V PE+DS++AMA+VI+LDQM G Sbjct: 180 AFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFG 211