BLASTX nr result

ID: Coptis24_contig00015004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015004
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis...   245   1e-62
ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis...   242   9e-62
ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|2...   233   6e-59
gb|ABK94888.1| unknown [Populus trichocarpa]                          232   1e-58
ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|2...   230   4e-58

>ref|XP_002269188.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
           gi|296089330|emb|CBI39102.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  245 bits (625), Expect = 1e-62
 Identities = 128/198 (64%), Positives = 151/198 (76%), Gaps = 8/198 (4%)
 Frame = -3

Query: 890 MPKVYPNAVAPQALKPA-----SDGQVQVLTVWKKSLLFNCKGFTVFDAKGNLVFRVDNY 726
           M KVYPNA A  +           G   VLTVWKKSLLFNC GFTVFD KGNLVFRVDNY
Sbjct: 1   MTKVYPNATAASSGSEGVKLCIGGGDPAVLTVWKKSLLFNCSGFTVFDGKGNLVFRVDNY 60

Query: 725 LCSNKTEILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTVKKQVNLLNSRSLA 546
           +  NK EI+LMDA+GKPLLTIRRK+L+L DNW+V+DGET  NP F ++K +NLL+S+SLA
Sbjct: 61  VAGNKGEIVLMDASGKPLLTIRRKRLSLGDNWLVYDGETAANPRFQMRKHLNLLSSKSLA 120

Query: 545 HVSVGSNNNV---LYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXXXXXXXXFRLVVQ 375
            VS GS++++   +Y+IEGSYSQRCCAVYDE+R+ VAEIKRKE           FRL+VQ
Sbjct: 121 RVSGGSSSSMRKAMYEIEGSYSQRCCAVYDERRRCVAEIKRKEAMAGVALGVDVFRLIVQ 180

Query: 374 PEMDSTVAMALVILLDQM 321
           PEMD+ VAMALVILLDQM
Sbjct: 181 PEMDTPVAMALVILLDQM 198


>ref|XP_002266077.1| PREDICTED: protein LURP-one-related 8 [Vitis vinifera]
           gi|147770903|emb|CAN65231.1| hypothetical protein
           VITISV_007600 [Vitis vinifera]
           gi|239056173|emb|CAQ58606.1| unknown gene [Vitis
           vinifera] gi|239056193|emb|CAQ58630.1| Unknown gene
           [Vitis vinifera]
          Length = 216

 Score =  242 bits (618), Expect = 9e-62
 Identities = 134/213 (62%), Positives = 149/213 (69%), Gaps = 20/213 (9%)
 Frame = -3

Query: 890 MPKVYPNAVAPQALKPASDG---------QVQVLTVWKKSLLFNCKGFTVFDAKGNLVFR 738
           M KVYPNA A       S+G            VLTVWKKSLLFNC GFTVFD KGNLVFR
Sbjct: 1   MTKVYPNATAASC---GSEGVNLCIGVGRDAAVLTVWKKSLLFNCNGFTVFDGKGNLVFR 57

Query: 737 VDNYLCSNKTEILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTVKKQVNLLNS 558
           VDNY+  +K EI+LMDA+GKPLLTIRRK+L+L DNW+V+DGET  NP F V+K  NLLNS
Sbjct: 58  VDNYVAGHKGEIVLMDASGKPLLTIRRKRLSLGDNWMVYDGETAENPRFQVRKHANLLNS 117

Query: 557 RSLAHVSVG-----------SNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 411
           +SLA VS G           S  N +Y+IEGSYSQRCCAVYDE R+ VAEIKRKE     
Sbjct: 118 KSLARVSGGGGAGGSSSSSSSPRNAMYEIEGSYSQRCCAVYDETRRCVAEIKRKEAVAGV 177

Query: 410 XXXXXXFRLVVQPEMDSTVAMALVILLDQMCGS 312
                 FRLVVQPEMD+ VAMALVILLDQM GS
Sbjct: 178 ALGVDVFRLVVQPEMDTPVAMALVILLDQMFGS 210


>ref|XP_002323697.1| predicted protein [Populus trichocarpa] gi|222868327|gb|EEF05458.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  233 bits (594), Expect = 6e-59
 Identities = 127/207 (61%), Positives = 153/207 (73%), Gaps = 17/207 (8%)
 Frame = -3

Query: 890 MPKVYPNAVAPQA---------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDAKGN 750
           M KVYPN VAP           LKPA++        VLTVWKKSLLFNC GFTV+D +GN
Sbjct: 1   MTKVYPN-VAPTTTNKKQQLFNLKPANNALDVDHAVVLTVWKKSLLFNCHGFTVYDGRGN 59

Query: 749 LVFRVDNYLCS--NKTEILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTVKKQ 576
           LVFRVDNY+ +  N  EI+LMDA GKPLLTIRRK+L+L DNW+V++GET  NP F VKK 
Sbjct: 60  LVFRVDNYMATSGNNGEIVLMDAAGKPLLTIRRKRLSLGDNWLVYEGETTTNPRFLVKKH 119

Query: 575 VNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXXXXX 402
           VN+LN++ LAHVS   GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE        
Sbjct: 120 VNILNTKCLAHVSPASGSNKNVVYEIEGSYAQRCCAVYDEKKRRVAEIKQKESVGGVAFG 179

Query: 401 XXXFRLVVQPEMDSTVAMALVILLDQM 321
              FRL+V PEM +++AMA+VILLDQM
Sbjct: 180 VDVFRLIVGPEMGTSMAMAMVILLDQM 206


>gb|ABK94888.1| unknown [Populus trichocarpa]
          Length = 218

 Score =  232 bits (591), Expect = 1e-58
 Identities = 126/213 (59%), Positives = 159/213 (74%), Gaps = 20/213 (9%)
 Frame = -3

Query: 890 MPKVYPNAVAPQA------------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDA 759
           M KVYPN VAP A            LK +++        VLTVWKKSLLFNC GFTVFD+
Sbjct: 1   MTKVYPN-VAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDS 59

Query: 758 KGNLVFRVDNYLCSNKT--EILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTV 585
           KGNL+FRVDNY+ ++ +  EI+LMDA GKPLLT+RRK+L+L D+W+V+DGET +NP F+V
Sbjct: 60  KGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSV 119

Query: 584 KKQVNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 411
           KK V++LN + LAHVS   GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE     
Sbjct: 120 KKHVSILNKKCLAHVSQAAGSNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERVGGV 179

Query: 410 XXXXXXFRLVVQPEMDSTVAMALVILLDQMCGS 312
                 FRL+V PE+DS++AMA+VI+LDQM GS
Sbjct: 180 AFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFGS 212


>ref|XP_002326260.1| predicted protein [Populus trichocarpa] gi|222833453|gb|EEE71930.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  230 bits (587), Expect = 4e-58
 Identities = 125/212 (58%), Positives = 158/212 (74%), Gaps = 20/212 (9%)
 Frame = -3

Query: 890 MPKVYPNAVAPQA------------LKPASDG----QVQVLTVWKKSLLFNCKGFTVFDA 759
           M KVYPN VAP A            LK +++        VLTVWKKSLLFNC GFTVFD+
Sbjct: 1   MTKVYPN-VAPTAAATNEKQRQLLKLKSSNNALDADHAVVLTVWKKSLLFNCNGFTVFDS 59

Query: 758 KGNLVFRVDNYLCSNKT--EILLMDATGKPLLTIRRKKLTLADNWVVFDGETEVNPLFTV 585
           KGNL+FRVDNY+ ++ +  EI+LMDA GKPLLT+RRK+L+L D+W+V+DGET +NP F+V
Sbjct: 60  KGNLLFRVDNYMATSGSNGEIVLMDAAGKPLLTMRRKRLSLGDSWLVYDGETAINPEFSV 119

Query: 584 KKQVNLLNSRSLAHVS--VGSNNNVLYKIEGSYSQRCCAVYDEKRKVVAEIKRKEXXXXX 411
           KK V++LN + LAHVS   GSN NV+Y+IEGSY+QRCCAVYDEK++ VAEIK+KE     
Sbjct: 120 KKHVSILNKKCLAHVSQAAGSNKNVMYEIEGSYTQRCCAVYDEKKRRVAEIKQKERVGGV 179

Query: 410 XXXXXXFRLVVQPEMDSTVAMALVILLDQMCG 315
                 FRL+V PE+DS++AMA+VI+LDQM G
Sbjct: 180 AFGVDVFRLLVGPEIDSSMAMAIVIVLDQMFG 211


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