BLASTX nr result

ID: Coptis24_contig00014994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014994
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16624.3| unnamed protein product [Vitis vinifera]              148   6e-34
ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265...   148   6e-34
emb|CAN81311.1| hypothetical protein VITISV_016403 [Vitis vinifera]   148   6e-34
ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sa...   147   8e-34
ref|XP_004140612.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin ...   147   8e-34

>emb|CBI16624.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  148 bits (373), Expect = 6e-34
 Identities = 71/92 (77%), Positives = 81/92 (88%)
 Frame = +2

Query: 2   YEQAEFIEREMEQMTEQIKSIIQTLNSNQGGDLDAIDGMTPLDVVAHILNNQLSSLMWVD 181
           YEQAEFIEREMEQMTEQIKSIIQTLN+NQGG+LD +DGMTPLDV+  ILNNQLSSLMW+D
Sbjct: 717 YEQAEFIEREMEQMTEQIKSIIQTLNTNQGGELDVMDGMTPLDVIVRILNNQLSSLMWID 776

Query: 182 EKAGEFSSRIQKLANRGPTANQDVMGSRLWMS 277
           EKA EF+SRIQKLA++G T+    MG + WMS
Sbjct: 777 EKAQEFNSRIQKLASQGSTSEHGSMGPKFWMS 808


>ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265039 [Vitis vinifera]
          Length = 775

 Score =  148 bits (373), Expect = 6e-34
 Identities = 71/92 (77%), Positives = 81/92 (88%)
 Frame = +2

Query: 2   YEQAEFIEREMEQMTEQIKSIIQTLNSNQGGDLDAIDGMTPLDVVAHILNNQLSSLMWVD 181
           YEQAEFIEREMEQMTEQIKSIIQTLN+NQGG+LD +DGMTPLDV+  ILNNQLSSLMW+D
Sbjct: 684 YEQAEFIEREMEQMTEQIKSIIQTLNTNQGGELDVMDGMTPLDVIVRILNNQLSSLMWID 743

Query: 182 EKAGEFSSRIQKLANRGPTANQDVMGSRLWMS 277
           EKA EF+SRIQKLA++G T+    MG + WMS
Sbjct: 744 EKAQEFNSRIQKLASQGSTSEHGSMGPKFWMS 775


>emb|CAN81311.1| hypothetical protein VITISV_016403 [Vitis vinifera]
          Length = 279

 Score =  148 bits (373), Expect = 6e-34
 Identities = 71/92 (77%), Positives = 81/92 (88%)
 Frame = +2

Query: 2   YEQAEFIEREMEQMTEQIKSIIQTLNSNQGGDLDAIDGMTPLDVVAHILNNQLSSLMWVD 181
           YEQAEFIEREMEQMTEQIKSIIQTLN+NQGG+LD +DGMTPLDV+  ILNNQLSSLMW+D
Sbjct: 188 YEQAEFIEREMEQMTEQIKSIIQTLNTNQGGELDVMDGMTPLDVIVRILNNQLSSLMWID 247

Query: 182 EKAGEFSSRIQKLANRGPTANQDVMGSRLWMS 277
           EKA EF+SRIQKLA++G T+    MG + WMS
Sbjct: 248 EKAQEFNSRIQKLASQGSTSEHGSMGPKFWMS 279


>ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sativus]
          Length = 757

 Score =  147 bits (372), Expect = 8e-34
 Identities = 72/93 (77%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   YEQAEFIEREMEQMTEQIKSIIQTLNSNQGGDLDAIDGMTPLDVVAHILNNQLSSLMWVD 181
           YEQAE+IERE+EQMTEQIKSIIQTLN+NQGG+LD IDGMTPLD V  ILNNQLSSLMW+D
Sbjct: 665 YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWID 724

Query: 182 EKAGEFSSRIQKL-ANRGPTANQDVMGSRLWMS 277
           EKA EFSSRIQKL A  GP A+++++G +LWMS
Sbjct: 725 EKAEEFSSRIQKLAATEGPAADRELLGQKLWMS 757


>ref|XP_004140612.1| PREDICTED: LOW QUALITY PROTEIN: nucleoporin nsp1-like [Cucumis
           sativus]
          Length = 755

 Score =  147 bits (372), Expect = 8e-34
 Identities = 72/93 (77%), Positives = 83/93 (89%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2   YEQAEFIEREMEQMTEQIKSIIQTLNSNQGGDLDAIDGMTPLDVVAHILNNQLSSLMWVD 181
           YEQAE+IERE+EQMTEQIKSIIQTLN+NQGG+LD IDGMTPLD V  ILNNQLSSLMW+D
Sbjct: 663 YEQAEYIERELEQMTEQIKSIIQTLNANQGGELDVIDGMTPLDAVVRILNNQLSSLMWID 722

Query: 182 EKAGEFSSRIQKL-ANRGPTANQDVMGSRLWMS 277
           EKA EFSSRIQKL A  GP A+++++G +LWMS
Sbjct: 723 EKAEEFSSRIQKLAATEGPAADRELLGQKLWMS 755


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