BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014992
         (815 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272379.1| PREDICTED: uncharacterized protein LOC100259...   198   1e-48
ref|XP_002521488.1| tRNA-pseudouridine synthase, putative [Ricin...   194   1e-47
emb|CBI34844.3| unnamed protein product [Vitis vinifera]              192   6e-47
ref|XP_003524564.1| PREDICTED: uncharacterized protein LOC100793...   171   2e-40
ref|NP_196950.2| tRNA pseudouridine synthase B [Arabidopsis thal...   169   5e-40

>ref|XP_002272379.1| PREDICTED: uncharacterized protein LOC100259460 [Vitis vinifera]
          Length = 520

 Score =  198 bits (503), Expect = 1e-48
 Identities = 115/230 (50%), Positives = 141/230 (61%), Gaps = 27/230 (11%)
 Frame = +1

Query: 205 FSTTATPYPLQYEMIISRPVSPPPCRHRLTKQSALSNEEESHS---------GIEGWVDQ 357
           FSTT+TP+PLQY+MIISRP  PPP R R  + + L N + + S         G E WVD+
Sbjct: 43  FSTTSTPHPLQYDMIISRPAQPPPPRPR-RRLTPLPNSKPNDSPDAESPDSEGFENWVDR 101

Query: 358 KL--------DKSXXXXXXXXXXXMYGXXXXXXXQISEEDKYVELKQEVVDFPRLHKREE 513
           KL        DK+           MYG         ++E KYVELKQEVV+   LHK+EE
Sbjct: 102 KLSGSDDLQMDKAKRKYYNKRRKRMYGSDSDEDGGAAQE-KYVELKQEVVELRTLHKKEE 160

Query: 514 ELFFYDAFAYPWEKDKHYKMVYQLEKKYFPDQCFDQAFVHPGE--DTKENRMVMSKLGKS 687
           EL+FYDAFAYPWEK+KHYKMVYQLEKKYFPD C D+AF+ PGE  ++  N     K+GK 
Sbjct: 161 ELYFYDAFAYPWEKEKHYKMVYQLEKKYFPDHCLDKAFLEPGETNESANNAKAKKKVGK- 219

Query: 688 GGEK--------IDKGMVFFEEGMSDKRDDVESVKDVTEKKVEDFFKGLK 813
           GGEK         DKG+VFFE    +K       K+++EKKVE+FFK LK
Sbjct: 220 GGEKREEIGDGGDDKGLVFFEGEKDEKVSVSAKEKELSEKKVEEFFKCLK 269


>ref|XP_002521488.1| tRNA-pseudouridine synthase, putative [Ricinus communis]
           gi|223539387|gb|EEF40978.1| tRNA-pseudouridine synthase,
           putative [Ricinus communis]
          Length = 513

 Score =  194 bits (494), Expect = 1e-47
 Identities = 120/246 (48%), Positives = 148/246 (60%), Gaps = 19/246 (7%)
 Frame = +1

Query: 133 PKMATRFCVSNQLKLFILKNKTLSFSTTATPYPLQYEMIISRPVS--PPPCRH---RLTK 297
           PK   R C+ + L      ++TL FST +TPYP QY+MIISRP    PP  R    R+TK
Sbjct: 25  PKSLNRACILSSL------SRTL-FSTVSTPYPFQYDMIISRPSQSQPPQSRSQPARVTK 77

Query: 298 Q-SALSNEEESHSGIEGWVDQKL--DKSXXXXXXXXXXXMYGXXXXXXXQISEEDKYVEL 468
             S  S E ES  G++ WVDQKL  DKS           MYG       + ++++ +VEL
Sbjct: 78  DDSDCSPEPESELGLDSWVDQKLSMDKSKRKYYNKRRKRMYGSDSDDDTR-NKDEGFVEL 136

Query: 469 KQEVVDFPRLHKREEELFFYDAFAYPWEKDKHYKMVYQLEKKYFPDQCFDQAFV-HPGED 645
           K EV  F  LHKREEEL+ YD FAYPWEKDKHYKMVYQLEKKYFPDQCFD+AF+ H   +
Sbjct: 137 KPEVAHFGSLHKREEELYMYDTFAYPWEKDKHYKMVYQLEKKYFPDQCFDKAFLDHKDSN 196

Query: 646 TKEN--------RMVMSKLGKSGGEKIDKGMVFFEEGMSDKRDDVES--VKDVTEKKVED 795
             +N        R+V       G  + DKG+VFFEE  ++   + E    KDVTE+KVE+
Sbjct: 197 FSKNESVKRSSKRVVKRDTNGVGDREEDKGLVFFEEEKAEIESNSEKNVAKDVTERKVEE 256

Query: 796 FFKGLK 813
           FFK LK
Sbjct: 257 FFKCLK 262


>emb|CBI34844.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score =  192 bits (489), Expect = 6e-47
 Identities = 109/220 (49%), Positives = 136/220 (61%), Gaps = 17/220 (7%)
 Frame = +1

Query: 205 FSTTATPYPLQYEMIISRPVSPPPCRHRLTKQSALSNEEESHS---------GIEGWVDQ 357
           FSTT+TP+PLQY+MIISRP  PPP R R  + + L N + + S         G E WVD+
Sbjct: 43  FSTTSTPHPLQYDMIISRPAQPPPPRPR-RRLTPLPNSKPNDSPDAESPDSEGFENWVDR 101

Query: 358 KL--------DKSXXXXXXXXXXXMYGXXXXXXXQISEEDKYVELKQEVVDFPRLHKREE 513
           KL        DK+           MYG         ++E KYVELKQEVV+   LHK+EE
Sbjct: 102 KLSGSDDLQMDKAKRKYYNKRRKRMYGSDSDEDGGAAQE-KYVELKQEVVELRTLHKKEE 160

Query: 514 ELFFYDAFAYPWEKDKHYKMVYQLEKKYFPDQCFDQAFVHPGEDTKENRMVMSKLGKSGG 693
           EL+FYDAFAYPWEK+KHYKMVYQLEKKYFPD C D+AF+ PGE  ++      ++G  G 
Sbjct: 161 ELYFYDAFAYPWEKEKHYKMVYQLEKKYFPDHCLDKAFLEPGETNEK------EIGDGGD 214

Query: 694 EKIDKGMVFFEEGMSDKRDDVESVKDVTEKKVEDFFKGLK 813
              DKG+VFFE    +K       K+++EKKVE+FFK LK
Sbjct: 215 ---DKGLVFFEGEKDEKVSVSAKEKELSEKKVEEFFKCLK 251


>ref|XP_003524564.1| PREDICTED: uncharacterized protein LOC100793939 [Glycine max]
          Length = 485

 Score =  171 bits (432), Expect = 2e-40
 Identities = 101/229 (44%), Positives = 128/229 (55%), Gaps = 8/229 (3%)
 Frame = +1

Query: 151 FCVSNQLKLFILKNKTLSFSTTATPYPLQYEMIISRPV-----SPPPCRHRLTKQSALSN 315
           FC       F    +    STT TPYPLQYE+II+RP       PPP R        + +
Sbjct: 24  FCRQRLSSSFPFPPRPRLLSTTPTPYPLQYELIINRPSYPDSPRPPPAR-------PIDS 76

Query: 316 EEESHSGIEGWVDQKLDKSXXXXXXXXXXXMYGXXXXXXXQISEEDKYVELKQEVVDFPR 495
            E            +L+K+           MYG       +   ++ +VELK EVVDFP 
Sbjct: 77  PEP-----------ELNKAQRKYYNKRRKRMYGSDEDESRR--PDETFVELKPEVVDFPT 123

Query: 496 LHKREEELFFYDAFAYPWEKDKHYKMVYQLEKKYFPDQCFDQAFVHPGE-DTKENRMVMS 672
           LHKREEEL+FYDAF YPWEKDKHYKMVYQLEKKYFPDQC D+AF+ PG+ +   N     
Sbjct: 124 LHKREEELYFYDAFTYPWEKDKHYKMVYQLEKKYFPDQCLDKAFLQPGQSNANANGKGKG 183

Query: 673 KLGKSGGEKIDKGMVFFEEGMSDKR--DDVESVKDVTEKKVEDFFKGLK 813
           +    GG   ++ +VFFEEG  +++  +     + + EKKVEDFFKGLK
Sbjct: 184 RKKVVGGGGGEEKLVFFEEGNVEEKGEESGSGSRQLKEKKVEDFFKGLK 232


>ref|NP_196950.2| tRNA pseudouridine synthase B [Arabidopsis thaliana]
           gi|110741670|dbj|BAE98781.1| tRNA synthase - like
           protein [Arabidopsis thaliana]
           gi|332004654|gb|AED92037.1| tRNA pseudouridine synthase
           B [Arabidopsis thaliana]
          Length = 540

 Score =  169 bits (429), Expect = 5e-40
 Identities = 99/245 (40%), Positives = 133/245 (54%), Gaps = 40/245 (16%)
 Frame = +1

Query: 196 TLSFSTTATPYPLQYEMIISRPVSPPPCRHRLTKQSALSN--EEESHSGIEGWVDQKL-- 363
           +L  STT+T YPLQY+MII+RP      ++R     A+ +   + +    + WVD KL  
Sbjct: 41  SLFLSTTSTRYPLQYDMIINRPTQSSLSQNRRRPPKAIESGAPDSAEPEFDSWVDNKLAM 100

Query: 364 --------------DKSXXXXXXXXXXXMYGXXXXXXXQISEEDK-YVELKQEVVDFPRL 498
                         DK+           +YG          + D+ +VELK EVV+F RL
Sbjct: 101 EREQGRPGSGDPEMDKAKRKYYSKRRKRLYGSDSEDENSSRKSDEGFVELKPEVVEFDRL 160

Query: 499 HKREEELFFYDAFAYPWEKDKHYKMVYQLEKKYFPDQCFDQAFVHPGEDTKEN------- 657
           H+REEEL+FYD FAYPWEKDKHYKMVYQLEKKY+PDQC D+AF+ PGE  K++       
Sbjct: 161 HQREEELYFYDTFAYPWEKDKHYKMVYQLEKKYYPDQCLDKAFLQPGEVLKKSDDSGKVR 220

Query: 658 ------------RMVMSKLGKSGGEKIDKGMVFFEE--GMSDKRDDVESVKDVTEKKVED 795
                       R  + ++G    ++ D  +VFF+E     +K+   + V  VTEKKVE 
Sbjct: 221 GKKKVVAALGGKRSEVKRIGMENCDEDDDKLVFFDEVKEKEEKKKSEDDVVVVTEKKVEQ 280

Query: 796 FFKGL 810
           FFKGL
Sbjct: 281 FFKGL 285