BLASTX nr result

ID: Coptis24_contig00014990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014990
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264522.1| PREDICTED: thiamin pyrophosphokinase 1 isofo...   411   e-112
ref|XP_002264561.1| PREDICTED: thiamin pyrophosphokinase 1 isofo...   411   e-112
ref|XP_002264610.1| PREDICTED: thiamin pyrophosphokinase 1 isofo...   405   e-110
ref|XP_002302706.1| predicted protein [Populus trichocarpa] gi|2...   397   e-108
ref|XP_003625913.1| Thiamin pyrophosphokinase [Medicago truncatu...   390   e-106

>ref|XP_002264522.1| PREDICTED: thiamin pyrophosphokinase 1 isoform 1 [Vitis vinifera]
          Length = 260

 Score =  411 bits (1057), Expect = e-112
 Identities = 197/257 (76%), Positives = 227/257 (88%)
 Frame = -2

Query: 890 MDLMTHCTHFLLPTIPLDDNKPTLTYALVVLNQKLPTFTPLLWKHAKLRLCADGGANRVF 711
           MDLM H + FLLP+IP  D+ P  TYALVVLNQ+LP FTPL+WKHA+LRLCADGGANR++
Sbjct: 5   MDLMRHSSAFLLPSIP--DDGPPPTYALVVLNQRLPRFTPLVWKHAQLRLCADGGANRLY 62

Query: 710 DEMPDLLPNQDPILVRNRYKPDVIKGDMDSIRTEVQDFYSNLGTKIVDESHDQDTTDLHK 531
           DEMP LL ++D   VRNRYKPD +KGDMDS+RTEV +FYSNLGTKIVDESHDQDTTDLHK
Sbjct: 63  DEMPGLLADEDGNDVRNRYKPDAVKGDMDSVRTEVLEFYSNLGTKIVDESHDQDTTDLHK 122

Query: 530 CVALVEDVTPNLEKPNLCILVAGALGGRFDHEIGNINVLCRFSNTRIVLLSEDCLIQLLP 351
           C+A + D TP+L+K NLCILVAGALGGRFDHE+GNINVL RFS  RI+LLS+DCLI LLP
Sbjct: 123 CIAFIRDFTPDLDKSNLCILVAGALGGRFDHEVGNINVLYRFSTMRIILLSDDCLIHLLP 182

Query: 350 RSHRHEINILSSVEGPHCGLIPIGIPSASTTTTGLQWDLDNTEMKFGGLISTSNIVREAR 171
           R+H HEI+I SSVEGPHCGL+PIG PS STTTTGLQWDL++TEMKFGGL+STSNIV+  +
Sbjct: 183 RTHHHEIHIQSSVEGPHCGLVPIGTPSGSTTTTGLQWDLNDTEMKFGGLVSTSNIVKGDK 242

Query: 170 ITVRSDSDLLWTISIRK 120
           ITV+SDSDLLWTISI+K
Sbjct: 243 ITVQSDSDLLWTISIKK 259


>ref|XP_002264561.1| PREDICTED: thiamin pyrophosphokinase 1 isoform 2 [Vitis vinifera]
          Length = 256

 Score =  411 bits (1057), Expect = e-112
 Identities = 197/257 (76%), Positives = 227/257 (88%)
 Frame = -2

Query: 890 MDLMTHCTHFLLPTIPLDDNKPTLTYALVVLNQKLPTFTPLLWKHAKLRLCADGGANRVF 711
           MDLM H + FLLP+IP  D+ P  TYALVVLNQ+LP FTPL+WKHA+LRLCADGGANR++
Sbjct: 1   MDLMRHSSAFLLPSIP--DDGPPPTYALVVLNQRLPRFTPLVWKHAQLRLCADGGANRLY 58

Query: 710 DEMPDLLPNQDPILVRNRYKPDVIKGDMDSIRTEVQDFYSNLGTKIVDESHDQDTTDLHK 531
           DEMP LL ++D   VRNRYKPD +KGDMDS+RTEV +FYSNLGTKIVDESHDQDTTDLHK
Sbjct: 59  DEMPGLLADEDGNDVRNRYKPDAVKGDMDSVRTEVLEFYSNLGTKIVDESHDQDTTDLHK 118

Query: 530 CVALVEDVTPNLEKPNLCILVAGALGGRFDHEIGNINVLCRFSNTRIVLLSEDCLIQLLP 351
           C+A + D TP+L+K NLCILVAGALGGRFDHE+GNINVL RFS  RI+LLS+DCLI LLP
Sbjct: 119 CIAFIRDFTPDLDKSNLCILVAGALGGRFDHEVGNINVLYRFSTMRIILLSDDCLIHLLP 178

Query: 350 RSHRHEINILSSVEGPHCGLIPIGIPSASTTTTGLQWDLDNTEMKFGGLISTSNIVREAR 171
           R+H HEI+I SSVEGPHCGL+PIG PS STTTTGLQWDL++TEMKFGGL+STSNIV+  +
Sbjct: 179 RTHHHEIHIQSSVEGPHCGLVPIGTPSGSTTTTGLQWDLNDTEMKFGGLVSTSNIVKGDK 238

Query: 170 ITVRSDSDLLWTISIRK 120
           ITV+SDSDLLWTISI+K
Sbjct: 239 ITVQSDSDLLWTISIKK 255


>ref|XP_002264610.1| PREDICTED: thiamin pyrophosphokinase 1 isoform 3 [Vitis vinifera]
           gi|297743866|emb|CBI36836.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  405 bits (1040), Expect = e-110
 Identities = 197/263 (74%), Positives = 227/263 (86%), Gaps = 6/263 (2%)
 Frame = -2

Query: 890 MDLMTHCTHFLLPTIPLDDNKPTLTYALVVLNQKLPTFTPLLWKHAKLRLCADGGANRVF 711
           MDLM H + FLLP+IP  D+ P  TYALVVLNQ+LP FTPL+WKHA+LRLCADGGANR++
Sbjct: 1   MDLMRHSSAFLLPSIP--DDGPPPTYALVVLNQRLPRFTPLVWKHAQLRLCADGGANRLY 58

Query: 710 DEMPDLLPNQDPILVRNRYKPDVIKGDMDSIRTEVQDFYSNL------GTKIVDESHDQD 549
           DEMP LL ++D   VRNRYKPD +KGDMDS+RTEV +FYSNL      GTKIVDESHDQD
Sbjct: 59  DEMPGLLADEDGNDVRNRYKPDAVKGDMDSVRTEVLEFYSNLDPALREGTKIVDESHDQD 118

Query: 548 TTDLHKCVALVEDVTPNLEKPNLCILVAGALGGRFDHEIGNINVLCRFSNTRIVLLSEDC 369
           TTDLHKC+A + D TP+L+K NLCILVAGALGGRFDHE+GNINVL RFS  RI+LLS+DC
Sbjct: 119 TTDLHKCIAFIRDFTPDLDKSNLCILVAGALGGRFDHEVGNINVLYRFSTMRIILLSDDC 178

Query: 368 LIQLLPRSHRHEINILSSVEGPHCGLIPIGIPSASTTTTGLQWDLDNTEMKFGGLISTSN 189
           LI LLPR+H HEI+I SSVEGPHCGL+PIG PS STTTTGLQWDL++TEMKFGGL+STSN
Sbjct: 179 LIHLLPRTHHHEIHIQSSVEGPHCGLVPIGTPSGSTTTTGLQWDLNDTEMKFGGLVSTSN 238

Query: 188 IVREARITVRSDSDLLWTISIRK 120
           IV+  +ITV+SDSDLLWTISI+K
Sbjct: 239 IVKGDKITVQSDSDLLWTISIKK 261


>ref|XP_002302706.1| predicted protein [Populus trichocarpa] gi|222844432|gb|EEE81979.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  397 bits (1021), Expect = e-108
 Identities = 192/257 (74%), Positives = 222/257 (86%)
 Frame = -2

Query: 890 MDLMTHCTHFLLPTIPLDDNKPTLTYALVVLNQKLPTFTPLLWKHAKLRLCADGGANRVF 711
           MD+MTH + FLLP    +D+  ++TYALVVLNQ+LP FTP+LW HA++R+CADGGANRVF
Sbjct: 1   MDVMTHSSTFLLPG---NDHSSSVTYALVVLNQRLPRFTPILWDHAQVRVCADGGANRVF 57

Query: 710 DEMPDLLPNQDPILVRNRYKPDVIKGDMDSIRTEVQDFYSNLGTKIVDESHDQDTTDLHK 531
           DEMP L P  D + VR+RYKPD+IKGDMDSIRTEV DFY+NLGTK+VDESHDQDTTDLHK
Sbjct: 58  DEMPLLFPRDDALDVRHRYKPDMIKGDMDSIRTEVLDFYTNLGTKVVDESHDQDTTDLHK 117

Query: 530 CVALVEDVTPNLEKPNLCILVAGALGGRFDHEIGNINVLCRFSNTRIVLLSEDCLIQLLP 351
           CVA + D  PNL+K NLCILVAGALGGRFDHE GNINVL RFS TRI+LLS+DCLI LLP
Sbjct: 118 CVAYIRDFAPNLDKSNLCILVAGALGGRFDHEAGNINVLYRFSTTRIILLSDDCLIYLLP 177

Query: 350 RSHRHEINILSSVEGPHCGLIPIGIPSASTTTTGLQWDLDNTEMKFGGLISTSNIVREAR 171
           R+H HEI+I SSVEGPHCGLIPIG+ S STTTTGLQWDL NTEM+FG L+STSN+V+  +
Sbjct: 178 RTHCHEIHIQSSVEGPHCGLIPIGMTSVSTTTTGLQWDLTNTEMRFGDLVSTSNLVQGEK 237

Query: 170 ITVRSDSDLLWTISIRK 120
           ITV+S SDLLWTISI+K
Sbjct: 238 ITVQSSSDLLWTISIKK 254


>ref|XP_003625913.1| Thiamin pyrophosphokinase [Medicago truncatula]
           gi|357516337|ref|XP_003628457.1| Thiamin
           pyrophosphokinase [Medicago truncatula]
           gi|355500928|gb|AES82131.1| Thiamin pyrophosphokinase
           [Medicago truncatula] gi|355522479|gb|AET02933.1|
           Thiamin pyrophosphokinase [Medicago truncatula]
           gi|388502368|gb|AFK39250.1| unknown [Medicago
           truncatula]
          Length = 260

 Score =  390 bits (1003), Expect = e-106
 Identities = 187/259 (72%), Positives = 217/259 (83%), Gaps = 2/259 (0%)
 Frame = -2

Query: 890 MDLMTHCTHFLLP--TIPLDDNKPTLTYALVVLNQKLPTFTPLLWKHAKLRLCADGGANR 717
           M+LM HC+ FLLP  T     +  +LTYALV+LNQ LP F PLLW HA  R+CADGGANR
Sbjct: 1   MELMCHCSTFLLPPETSSSSSSSVSLTYALVILNQNLPKFAPLLWDHAHTRVCADGGANR 60

Query: 716 VFDEMPDLLPNQDPILVRNRYKPDVIKGDMDSIRTEVQDFYSNLGTKIVDESHDQDTTDL 537
           V+DEMP   P+Q+P  VR RYKPD IKGDMDSIRTEV DFY+NLGTKI+DES DQDTTDL
Sbjct: 61  VYDEMPLFFPHQNPSHVRTRYKPDAIKGDMDSIRTEVLDFYANLGTKIIDESQDQDTTDL 120

Query: 536 HKCVALVEDVTPNLEKPNLCILVAGALGGRFDHEIGNINVLCRFSNTRIVLLSEDCLIQL 357
           HKCVA + D+ PN +K  LCIL  GALGGRFDHEIGNINVLCRFSNTRI+LLS+DCLIQL
Sbjct: 121 HKCVAYIRDLIPNTDKSELCILAVGALGGRFDHEIGNINVLCRFSNTRIILLSDDCLIQL 180

Query: 356 LPRSHRHEINILSSVEGPHCGLIPIGIPSASTTTTGLQWDLDNTEMKFGGLISTSNIVRE 177
           LP+++ H+I I SSVEGPHCGL+PIG+PS S+TTTGLQWDL +TEM+FGGL+STSNIV+ 
Sbjct: 181 LPKNYSHKIFIQSSVEGPHCGLVPIGMPSGSSTTTGLQWDLKDTEMRFGGLVSTSNIVKG 240

Query: 176 ARITVRSDSDLLWTISIRK 120
             +TV+SDSDLLWTISI+K
Sbjct: 241 DIVTVQSDSDLLWTISIKK 259


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