BLASTX nr result

ID: Coptis24_contig00014984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014984
         (1857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277887.1| PREDICTED: homoserine kinase-like [Vitis vin...   472   e-130
emb|CAN67551.1| hypothetical protein VITISV_035502 [Vitis vinifera]   471   e-130
ref|XP_002517698.1| homoserine kinase, putative [Ricinus communi...   455   e-125
ref|XP_004144892.1| PREDICTED: homoserine kinase-like [Cucumis s...   442   e-121
ref|XP_002328135.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120

>ref|XP_002277887.1| PREDICTED: homoserine kinase-like [Vitis vinifera]
          Length = 368

 Score =  472 bits (1215), Expect = e-130
 Identities = 248/375 (66%), Positives = 285/375 (76%)
 Frame = +2

Query: 239  MAICNQSPFKLXXXXXXXXTNLFKTTPSTQNFQIIKCKTSLSSKPLKTEPEPVFKTVKTF 418
            MAIC  SP K         +N ++     ++F   +C  S   K L  +P+PVF +VK+F
Sbjct: 1    MAICFHSPSK--PTCISPSSNHYRPNLHARSF---RCNFS---KTLTADPQPVFTSVKSF 52

Query: 419  APATFANIGPGFDFLGCAIDGVGDHVTLSIDPDVQPGHILISSIDGIGNSSKKLSKDPLW 598
            APAT AN+GPGFDFLG A+DG+GD V+L +DPDV+PG I I  IDG+GNS+KKLSK+PLW
Sbjct: 53   APATVANLGPGFDFLGAAVDGIGDFVSLRVDPDVRPGEISIVDIDGVGNSAKKLSKNPLW 112

Query: 599  NCAGIAAISVMRMLGVRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNEIFGGRLTVS 778
            NCAGIAAISVM+MLGVRS                              VNEIFG +L V 
Sbjct: 113  NCAGIAAISVMKMLGVRSVGLSLSLEKGLPLGSGLGSSAASAAAAAVAVNEIFGRKLGVD 172

Query: 779  DLVLAGLDSEAKVSGYHADNVAPAIMGGFVLIRSYDPLELIRLKFPFDKDLFFVLVNPEF 958
            DLVLAGLDSEAKVSGYHADNVAPA+MGGFVLIRSYDPLELI L FP DK+LFFVLVNPEF
Sbjct: 173  DLVLAGLDSEAKVSGYHADNVAPALMGGFVLIRSYDPLELIPLTFPSDKELFFVLVNPEF 232

Query: 959  EAPTKKMRAVLPTEISMKEHIWNSSQAGALVASVLQGDLRVLGKAMSSDKIVEPKRAPLI 1138
            EAPTKKMRA LP+EI M +H+WN SQA ALVAS+LQGDLR LGKA+SSD+IVEP+RAPLI
Sbjct: 233  EAPTKKMRAALPSEIGMSDHVWNCSQAAALVASILQGDLRGLGKALSSDRIVEPRRAPLI 292

Query: 1139 PGMEAVKRAALEAGAFGCTISGAGPTAVAVIDDLKKGEEIGNRMVEAFLKEGNLKASATV 1318
            PGME VK+AALEAGAFGCTISGAGPTAVA+ DD +KG EIG RMVEAFL+EG LKA A V
Sbjct: 293  PGMEGVKKAALEAGAFGCTISGAGPTAVAITDDEEKGREIGERMVEAFLEEGKLKAVAMV 352

Query: 1319 RSLDRVGARIVSSEL 1363
            + LDRVGAR++SS L
Sbjct: 353  KQLDRVGARLMSSNL 367


>emb|CAN67551.1| hypothetical protein VITISV_035502 [Vitis vinifera]
          Length = 368

 Score =  471 bits (1213), Expect = e-130
 Identities = 248/375 (66%), Positives = 284/375 (75%)
 Frame = +2

Query: 239  MAICNQSPFKLXXXXXXXXTNLFKTTPSTQNFQIIKCKTSLSSKPLKTEPEPVFKTVKTF 418
            MAIC  SP K         +N ++     ++F   +C  S   K L  +P+PVF +VK+F
Sbjct: 1    MAICFHSPSK--PTCISPSSNHYRPNLHARSF---RCNFS---KTLTADPQPVFTSVKSF 52

Query: 419  APATFANIGPGFDFLGCAIDGVGDHVTLSIDPDVQPGHILISSIDGIGNSSKKLSKDPLW 598
            APAT AN+GPGFDFLG A+DG+GD V+L +DPDV+PG I I  IDG+GNS+KKLSK+PLW
Sbjct: 53   APATVANLGPGFDFLGAAVDGIGDFVSLRVDPDVRPGEISIVDIDGVGNSAKKLSKNPLW 112

Query: 599  NCAGIAAISVMRMLGVRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNEIFGGRLTVS 778
            NCAGIAAISVM+MLGVRS                              VNEIFG +L V 
Sbjct: 113  NCAGIAAISVMKMLGVRSVGLSLSLEKGLPLGSGLGSSAASAAAAAVAVNEIFGRKLGVD 172

Query: 779  DLVLAGLDSEAKVSGYHADNVAPAIMGGFVLIRSYDPLELIRLKFPFDKDLFFVLVNPEF 958
            DLVLAGLDSEAKVSGYHADNVAPA+MGGFVLIRSYDPLELI L FP DK+LFFVLVNPEF
Sbjct: 173  DLVLAGLDSEAKVSGYHADNVAPALMGGFVLIRSYDPLELIPLTFPSDKELFFVLVNPEF 232

Query: 959  EAPTKKMRAVLPTEISMKEHIWNSSQAGALVASVLQGDLRVLGKAMSSDKIVEPKRAPLI 1138
            EAPTKKMRA LP+EI M +H+WN SQA ALVAS+LQGDLR LGKA+SSD+IVEP+RAPLI
Sbjct: 233  EAPTKKMRAALPSEIGMSDHVWNCSQAAALVASILQGDLRGLGKALSSDRIVEPRRAPLI 292

Query: 1139 PGMEAVKRAALEAGAFGCTISGAGPTAVAVIDDLKKGEEIGNRMVEAFLKEGNLKASATV 1318
            PGME VK+AALEAGAFGCTISGAGPTAVA+ DD +KG EIG RMVEAFL EG LKA A V
Sbjct: 293  PGMEGVKKAALEAGAFGCTISGAGPTAVAITDDEEKGREIGERMVEAFLXEGKLKAVAMV 352

Query: 1319 RSLDRVGARIVSSEL 1363
            + LDRVGAR++SS L
Sbjct: 353  KQLDRVGARLMSSNL 367


>ref|XP_002517698.1| homoserine kinase, putative [Ricinus communis]
            gi|223543330|gb|EEF44862.1| homoserine kinase, putative
            [Ricinus communis]
          Length = 367

 Score =  455 bits (1170), Expect = e-125
 Identities = 239/377 (63%), Positives = 284/377 (75%)
 Frame = +2

Query: 239  MAICNQSPFKLXXXXXXXXTNLFKTTPSTQNFQIIKCKTSLSSKPLKTEPEPVFKTVKTF 418
            MAIC  SP K          +L  +T  T+   +++C  SL +    TEPEPVF +VK+F
Sbjct: 1    MAICFYSPLK--------PISLSPSTHFTKPQPLLRCNFSLPTITT-TEPEPVFTSVKSF 51

Query: 419  APATFANIGPGFDFLGCAIDGVGDHVTLSIDPDVQPGHILISSIDGIGNSSKKLSKDPLW 598
            APAT AN+GPGFDFLGCA+DG+GD VT+++DP V PG I I+ I G  ++SKKLSK+PLW
Sbjct: 52   APATVANLGPGFDFLGCAVDGLGDFVTVTVDPSVHPGEISIAEISGT-HASKKLSKNPLW 110

Query: 599  NCAGIAAISVMRMLGVRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNEIFGGRLTVS 778
            NCAGIA I+ M+ML VRS                              VNEIFGG+L V 
Sbjct: 111  NCAGIAGIATMKMLNVRSVGLSLTLEKGLPLGSGLGSSAASAAAAAVAVNEIFGGKLDVK 170

Query: 779  DLVLAGLDSEAKVSGYHADNVAPAIMGGFVLIRSYDPLELIRLKFPFDKDLFFVLVNPEF 958
            +LVLAGL+SEAKVSGYHADN+APAIMGGFVLI++Y+PLEL+RLKFP +KDLFFVLV+P+F
Sbjct: 171  ELVLAGLESEAKVSGYHADNIAPAIMGGFVLIKNYEPLELMRLKFPVEKDLFFVLVSPDF 230

Query: 959  EAPTKKMRAVLPTEISMKEHIWNSSQAGALVASVLQGDLRVLGKAMSSDKIVEPKRAPLI 1138
            EAPTKKMRA LP EI M  H+WN SQAGALVASVLQGDL  LGKA+SSDKIVEPKRAPLI
Sbjct: 231  EAPTKKMRAALPAEIGMPHHVWNCSQAGALVASVLQGDLVGLGKALSSDKIVEPKRAPLI 290

Query: 1139 PGMEAVKRAALEAGAFGCTISGAGPTAVAVIDDLKKGEEIGNRMVEAFLKEGNLKASATV 1318
            PGME VK+AA+ AGAFGCTISGAGPTAVAVIDD ++G EIG +MV+AFLKEGNLKA A V
Sbjct: 291  PGMEEVKKAAIAAGAFGCTISGAGPTAVAVIDDEERGTEIGEKMVDAFLKEGNLKAVAMV 350

Query: 1319 RSLDRVGARIVSSELSR 1369
            + LDR+GAR+V +  +R
Sbjct: 351  KRLDRIGARLVGNVPNR 367


>ref|XP_004144892.1| PREDICTED: homoserine kinase-like [Cucumis sativus]
            gi|449471990|ref|XP_004153462.1| PREDICTED: homoserine
            kinase-like [Cucumis sativus]
            gi|449522566|ref|XP_004168297.1| PREDICTED: homoserine
            kinase-like [Cucumis sativus]
          Length = 373

 Score =  442 bits (1137), Expect = e-121
 Identities = 224/342 (65%), Positives = 269/342 (78%), Gaps = 2/342 (0%)
 Frame = +2

Query: 338  IIKCKTSLSSKPLKT--EPEPVFKTVKTFAPATFANIGPGFDFLGCAIDGVGDHVTLSID 511
            + +C  SL S+   T  EP+PVF +VK FAPAT AN+GPGFDFLGCA+DG+GD+V+LS+D
Sbjct: 27   LFRCSLSLPSRTAVTSVEPQPVFSSVKAFAPATVANLGPGFDFLGCAVDGLGDYVSLSVD 86

Query: 512  PDVQPGHILISSIDGIGNSSKKLSKDPLWNCAGIAAISVMRMLGVRSTXXXXXXXXXXXX 691
             +V PG + IS I G  N++ KLSK+PL+NCAGIAAI VM+MLG+RS             
Sbjct: 87   SNVHPGEVAISDITG--NNTNKLSKNPLYNCAGIAAIEVMKMLGIRSVGLSLSLEKGLPL 144

Query: 692  XXXXXXXXXXXXXXXXXVNEIFGGRLTVSDLVLAGLDSEAKVSGYHADNVAPAIMGGFVL 871
                             VN +FGG+L V +LVLAGL SE KVSGYHADNVAPAIMGGF+L
Sbjct: 145  GSGLGSSAASAAAAAIAVNGLFGGKLGVEELVLAGLKSEEKVSGYHADNVAPAIMGGFIL 204

Query: 872  IRSYDPLELIRLKFPFDKDLFFVLVNPEFEAPTKKMRAVLPTEISMKEHIWNSSQAGALV 1051
            IR+Y+PLELIRLKFP +K+LFFVLV+PEFEAPTKKMRA LP E+ M  H+WNSSQAGALV
Sbjct: 205  IRNYEPLELIRLKFPVEKELFFVLVSPEFEAPTKKMRAALPAEVGMPHHVWNSSQAGALV 264

Query: 1052 ASVLQGDLRVLGKAMSSDKIVEPKRAPLIPGMEAVKRAALEAGAFGCTISGAGPTAVAVI 1231
            A+VLQGD   LGKA+SSDKIVEP+R+PLIPGM+ VK+AA+ AGAFGCTISGAGPTAVAVI
Sbjct: 265  AAVLQGDTMGLGKALSSDKIVEPRRSPLIPGMDGVKKAAIAAGAFGCTISGAGPTAVAVI 324

Query: 1232 DDLKKGEEIGNRMVEAFLKEGNLKASATVRSLDRVGARIVSS 1357
            D+ +KG+EIG RMV AFLKEGNLKA+A+V+ LDRVGAR++ S
Sbjct: 325  DNEEKGKEIGERMVMAFLKEGNLKATASVKRLDRVGARLIGS 366


>ref|XP_002328135.1| predicted protein [Populus trichocarpa] gi|222837650|gb|EEE76015.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  436 bits (1122), Expect = e-120
 Identities = 236/375 (62%), Positives = 271/375 (72%), Gaps = 2/375 (0%)
 Frame = +2

Query: 239  MAICNQSPFKLXXXXXXXXTNLFKTTPSTQNFQIIKCKTSLSSKPL--KTEPEPVFKTVK 412
            MAIC  SP K         TNL    P+     I++C  SL   P+   TEPEPVF +V+
Sbjct: 1    MAICFLSPLKPITPTTSLTTNLNPKKPN-----ILRCNFSL---PIITTTEPEPVFTSVR 52

Query: 413  TFAPATFANIGPGFDFLGCAIDGVGDHVTLSIDPDVQPGHILISSIDGIGNSSKKLSKDP 592
            +FAPAT AN+GPGFDFLGCA+DG+GD V+L +DP V PG + IS I G    +K LSK+P
Sbjct: 53   SFAPATVANLGPGFDFLGCAVDGLGDFVSLRVDPSVHPGELSISDISG----TKNLSKNP 108

Query: 593  LWNCAGIAAISVMRMLGVRSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVNEIFGGRLT 772
            L NCAGIAAI+ M+ML +RS                              VNE+FG +L 
Sbjct: 109  LNNCAGIAAIATMKMLNIRSVGLSLSLEKGLPLGSGLGSSAASAAAAAVAVNEMFGRKLE 168

Query: 773  VSDLVLAGLDSEAKVSGYHADNVAPAIMGGFVLIRSYDPLELIRLKFPFDKDLFFVLVNP 952
            V DLVLAGL+SEAKVSGYHADN+APAIMGGFVLIRSYDPLEL+ L+FP +KDL FVLV+P
Sbjct: 169  VKDLVLAGLESEAKVSGYHADNIAPAIMGGFVLIRSYDPLELMSLQFPVEKDLIFVLVSP 228

Query: 953  EFEAPTKKMRAVLPTEISMKEHIWNSSQAGALVASVLQGDLRVLGKAMSSDKIVEPKRAP 1132
            +FEAPTKKMRA LP EI M  H+WN SQAGALVASVLQGDL  LGKA+SSDKIVEPKRAP
Sbjct: 229  DFEAPTKKMRAALPAEIGMSHHVWNCSQAGALVASVLQGDLVGLGKALSSDKIVEPKRAP 288

Query: 1133 LIPGMEAVKRAALEAGAFGCTISGAGPTAVAVIDDLKKGEEIGNRMVEAFLKEGNLKASA 1312
            LIPGM  VK+AALEAGAFGCTISGAGPTAVAV+    +G E+G RMVEAF KEGNLKA A
Sbjct: 289  LIPGMVGVKKAALEAGAFGCTISGAGPTAVAVVGSEDRGMEVGERMVEAFWKEGNLKAVA 348

Query: 1313 TVRSLDRVGARIVSS 1357
             V+ LDRVGAR+V S
Sbjct: 349  MVKRLDRVGARLVGS 363


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