BLASTX nr result
ID: Coptis24_contig00014963
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00014963
(606 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera] 120 5e-34
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera] 120 5e-34
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera] 119 2e-33
ref|XP_003566743.1| PREDICTED: uncharacterized protein LOC100838... 102 8e-32
gb|AAX96514.1| retrotransposon protein, putative, unclassified [... 104 8e-31
>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
Length = 1469
Score = 120 bits (300), Expect(2) = 5e-34
Identities = 62/142 (43%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
Frame = +3
Query: 180 SLHAISSSWAPETMRIKGGIGYVSTIVLVDSGSTHNFISETLASKVGLQPERGGKFEVVV 359
S+HA+ S P+TMR G I + ++LVD+GSTHNF+ ++ + L V V
Sbjct: 349 SIHALVGSPNPKTMRFLGHICGRAVVILVDTGSTHNFMDPSVIQRAHLPSNPTEGLSVKV 408
Query: 360 ASGDKLSSKGKCTNLKLNLRVPLF-VDFYLLPLEGYDIVLGTQWLRTLGPIMWDFTKLQM 536
A+G + S+G C + L+++ L+ +DFY+L L G DIVLG QWL+TLGPI+WDF++LQM
Sbjct: 409 ANGQAVRSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQM 468
Query: 537 KFKVAEKEVLLQGVNPPANKLL 602
+F V +K LQG++P L+
Sbjct: 469 EFSVWDKPRKLQGMSPTGISLV 490
Score = 50.1 bits (118), Expect(2) = 5e-34
Identities = 21/48 (43%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Frame = +2
Query: 2 AELQERRTKGLCYNCNEKFVLGHRCK--KLFVIEGC*DEEDSDIIMNE 139
++++ERR KGLCYNC++K+ GH+CK +LF++E C + D ++ +E
Sbjct: 280 SQMKERRDKGLCYNCDDKWAPGHKCKSARLFIME-CDESSDDEVPKSE 326
>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
Length = 1366
Score = 120 bits (300), Expect(2) = 5e-34
Identities = 62/142 (43%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
Frame = +3
Query: 180 SLHAISSSWAPETMRIKGGIGYVSTIVLVDSGSTHNFISETLASKVGLQPERGGKFEVVV 359
S+HA+ S P+TMR G I + ++LVD+GSTHNF+ ++ + L V V
Sbjct: 316 SIHALVGSPNPKTMRFLGHICGRAVVILVDTGSTHNFMDPSVIQRAHLPSNPTEGLSVKV 375
Query: 360 ASGDKLSSKGKCTNLKLNLRVPLF-VDFYLLPLEGYDIVLGTQWLRTLGPIMWDFTKLQM 536
A+G + S+G C + L+++ L+ +DFY+L L G DIVLG QWL+TLGPI+WDF++LQM
Sbjct: 376 ANGQAVRSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQM 435
Query: 537 KFKVAEKEVLLQGVNPPANKLL 602
+F V +K LQG++P L+
Sbjct: 436 EFSVWDKPRKLQGMSPTGISLV 457
Score = 50.1 bits (118), Expect(2) = 5e-34
Identities = 21/48 (43%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Frame = +2
Query: 2 AELQERRTKGLCYNCNEKFVLGHRCK--KLFVIEGC*DEEDSDIIMNE 139
++++ERR KGLCYNC++K+ GH+CK +LF++E C + D ++ +E
Sbjct: 247 SQMKERRDKGLCYNCDDKWAPGHKCKSXRLFIME-CDESSDDEVPKSE 293
>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
Length = 2822
Score = 119 bits (298), Expect(2) = 2e-33
Identities = 62/142 (43%), Positives = 91/142 (64%), Gaps = 1/142 (0%)
Frame = +3
Query: 180 SLHAISSSWAPETMRIKGGIGYVSTIVLVDSGSTHNFISETLASKVGLQPERGGKFEVVV 359
S+HA+ S P+TMR G I + ++LVD+GSTHNF+ ++ + L V V
Sbjct: 314 SIHALVGSPNPKTMRFLGHICGRAVVILVDTGSTHNFMDPSVIQRAHLPSNPTEGLSVKV 373
Query: 360 ASGDKLSSKGKCTNLKLNLRVPLF-VDFYLLPLEGYDIVLGTQWLRTLGPIMWDFTKLQM 536
A+G + S+G C + L+++ L+ +DFY+L L G DIVLG QWL+TLGPI+WDF++LQM
Sbjct: 374 ANGQAVCSEGSCAAVPLHMQGNLYTIDFYILTLGGCDIVLGVQWLQTLGPILWDFSRLQM 433
Query: 537 KFKVAEKEVLLQGVNPPANKLL 602
+F V +K LQG+ P L+
Sbjct: 434 EFSVWDKPQKLQGMAPTGISLV 455
Score = 48.9 bits (115), Expect(2) = 2e-33
Identities = 21/48 (43%), Positives = 35/48 (72%), Gaps = 2/48 (4%)
Frame = +2
Query: 2 AELQERRTKGLCYNCNEKFVLGHRCK--KLFVIEGC*DEEDSDIIMNE 139
++++ERR KGLCYNC++K+ GH+CK +LF++E C + D + +E
Sbjct: 245 SQMKERRDKGLCYNCDDKWAPGHKCKSARLFIME-CDESSDDKVPKSE 291
>ref|XP_003566743.1| PREDICTED: uncharacterized protein LOC100838891 [Brachypodium
distachyon]
Length = 635
Score = 102 bits (254), Expect(2) = 8e-32
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Frame = +3
Query: 162 E*DALDSLHAISSSWAPETMRIKGGIGYVSTIVLVDSGSTHNFISETLASKVGLQPERGG 341
E D SL AI+ +TM++ +G + L+DSGSTHNFISE LA+ V G
Sbjct: 178 EEDLQISLLAITGVRTSDTMQLVVWVGERELLALIDSGSTHNFISEELAAHVSAPFCTGR 237
Query: 342 KFEVVVASGDKLSSKGKCTNLKLNLRVPLFV-DFYLLPLEGYDIVLGTQWLRTLGPIMWD 518
+ V +A+GD ++ G + + + FV D Y +PL G+D+VLGT WL+TLGPI+WD
Sbjct: 238 RLRVTIANGDHVTCSGLLRHTAIAIGQESFVVDLYAIPLGGFDVVLGTHWLKTLGPILWD 297
Query: 519 FTKLQMKF 542
F +L M F
Sbjct: 298 FERLYMSF 305
Score = 60.5 bits (145), Expect(2) = 8e-32
Identities = 26/42 (61%), Positives = 33/42 (78%)
Frame = +2
Query: 2 AELQERRTKGLCYNCNEKFVLGHRCKKLFVIEGC*DEEDSDI 127
AE++ER+ KGLC+NC+EKFV GHRCK LF IE EE+ D+
Sbjct: 140 AEMEERQAKGLCFNCDEKFVRGHRCKCLFYIEVADKEEEEDL 181
>gb|AAX96514.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 575
Score = 104 bits (259), Expect(2) = 8e-31
Identities = 63/147 (42%), Positives = 87/147 (59%), Gaps = 6/147 (4%)
Frame = +3
Query: 180 SLHAISSSWAPETMRIKGGIGYVSTIVLVDSGSTHNFISETLASKV--GLQPERGGKFEV 353
SL+ ++ TMR+ I + LVDSGSTHNFI LA + L P R + V
Sbjct: 371 SLNVLAGLDGANTMRLPVEIAGERVVALVDSGSTHNFIHTELARHLCLHLSPVRHDLY-V 429
Query: 354 VVASGDKLSSKGKCTNLKLNLRVPLF-VDFYLLPLEGYDIVLGTQWLRTLGPIMWDFTKL 530
VVA+GD+L S G+C NL+L + LF VD + L + DI+LGT+WL TLGPI+WDF +
Sbjct: 430 VVANGDRLVSPGRCANLRLRIEGKLFTVDCFALDISTVDIILGTEWLSTLGPILWDFRNM 489
Query: 531 QMKFKVAEKEVLLQGV---NPPANKLL 602
+M + +EV L G+ PP ++L
Sbjct: 490 RMSIWRSTREVTLHGLANRRPPHCEML 516
Score = 55.1 bits (131), Expect(2) = 8e-31
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +2
Query: 2 AELQERRTKGLCYNCNEKFVLGHRCKKLFVIE 97
AEL ERR +GLCYNC+EKFV GH+C +LF IE
Sbjct: 321 AELAERRCQGLCYNCDEKFVRGHKCARLFYIE 352