BLASTX nr result

ID: Coptis24_contig00014956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014956
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g...   124   8e-27
emb|CBI36110.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_003569868.1| PREDICTED: probable peptide transporter At1g...   115   5e-24
ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-23
emb|CBI20867.3| unnamed protein product [Vitis vinifera]              111   5e-23

>ref|XP_002279092.1| PREDICTED: probable peptide transporter At1g52190-like [Vitis
           vinifera]
          Length = 584

 Score =  124 bits (311), Expect = 8e-27
 Identities = 58/108 (53%), Positives = 80/108 (74%), Gaps = 1/108 (0%)
 Frame = -3

Query: 497 PKSMSSIGVALFALGMGCGNIVGSVIVEAVNHFSSTGGRDSWVSSNLNKGRYDYYYWILT 318
           PKSMSSI  ALF LGM   N++ SVI+ AVNH +S GG++SWVS+N+NKG YD YYW+L 
Sbjct: 479 PKSMSSIAAALFGLGMAVANLLASVILSAVNHLTSRGGKESWVSNNINKGHYDNYYWLLA 538

Query: 317 MLSVANFIYFVVCSYLYGDCEGQRSKIWDESEG-QNDVDLSKSKELPA 177
           ++S  N +Y++VCSY YG C  Q +K  DE EG +++ +LSK ++ P+
Sbjct: 539 IMSAINLLYYLVCSYFYGPCVEQGTK--DEVEGLKDEEELSKLRQSPS 584


>emb|CBI36110.3| unnamed protein product [Vitis vinifera]
          Length = 622

 Score =  124 bits (310), Expect = 1e-26
 Identities = 55/100 (55%), Positives = 74/100 (74%), Gaps = 3/100 (3%)
 Frame = -3

Query: 497 PKSMSSIGVALFALGMGCGNIVGSVIVEAVNHFSSTGGRDSWVSSNLNKGRYDYYYWILT 318
           PKSMSSI  ALF LGM   N++ SVI+ AVNH +S GG++SWVS+N+NKG YD YYW+L 
Sbjct: 479 PKSMSSIAAALFGLGMAVANLLASVILSAVNHLTSRGGKESWVSNNINKGHYDNYYWLLA 538

Query: 317 MLSVANFIYFVVCSYLYGDCEGQRSKIWDES---EGQNDV 207
           ++S  N +Y++VCSY YG C  Q +K+ DE    EG+N++
Sbjct: 539 IMSAINLLYYLVCSYFYGPCVEQGTKVSDEGKSMEGENEL 578


>ref|XP_003569868.1| PREDICTED: probable peptide transporter At1g52190-like
           [Brachypodium distachyon]
          Length = 586

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/95 (57%), Positives = 70/95 (73%)
 Frame = -3

Query: 497 PKSMSSIGVALFALGMGCGNIVGSVIVEAVNHFSSTGGRDSWVSSNLNKGRYDYYYWILT 318
           PK+MSSIGV+L ALGMGCG ++GS IV  ++  +   GRDSWVSSNLN+G YDYYY +L 
Sbjct: 489 PKTMSSIGVSLLALGMGCGALLGSAIVGIISRATGADGRDSWVSSNLNRGHYDYYYMVLA 548

Query: 317 MLSVANFIYFVVCSYLYGDCEGQRSKIWDESEGQN 213
            LSVANF+YFV C + YG+ EGQ   +  E E ++
Sbjct: 549 GLSVANFVYFVWCGWTYGE-EGQNRVMATEDEEED 582


>ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|222846977|gb|EEE84524.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  112 bits (281), Expect = 2e-23
 Identities = 50/100 (50%), Positives = 69/100 (69%)
 Frame = -3

Query: 497 PKSMSSIGVALFALGMGCGNIVGSVIVEAVNHFSSTGGRDSWVSSNLNKGRYDYYYWILT 318
           PKSMSSI  ALF LGM   N++ S I+ AV+  +S GG++SWVS+N+NKG YD YYW+L 
Sbjct: 370 PKSMSSIAAALFGLGMAVANLLASAILSAVDKLTSRGGKESWVSNNINKGHYDNYYWLLA 429

Query: 317 MLSVANFIYFVVCSYLYGDCEGQRSKIWDESEGQNDVDLS 198
           ++S  N +YF+VCS+ YG C  +  K+ DE  G  + + S
Sbjct: 430 IMSSVNLLYFLVCSWAYGPCVERVIKVSDEGNGFKEEEFS 469


>emb|CBI20867.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  111 bits (278), Expect = 5e-23
 Identities = 51/95 (53%), Positives = 68/95 (71%)
 Frame = -3

Query: 494 KSMSSIGVALFALGMGCGNIVGSVIVEAVNHFSSTGGRDSWVSSNLNKGRYDYYYWILTM 315
           KSMSSI VALF +G+   N+VGS++V  VN  +S GG++SW+SSNLNKG  DYYYW++T+
Sbjct: 488 KSMSSIAVALFTVGIAGSNLVGSLLVNVVNSVTSKGGKESWLSSNLNKGHLDYYYWLITI 547

Query: 314 LSVANFIYFVVCSYLYGDCEGQRSKIWDESEGQND 210
           L + N IYF+VC + YG  E ++  I DE E   D
Sbjct: 548 LCLINIIYFLVCCWSYGPFEDEKPGISDEGEANID 582



 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/107 (46%), Positives = 72/107 (67%)
 Frame = -3

Query: 497  PKSMSSIGVALFALGMGCGNIVGSVIVEAVNHFSSTGGRDSWVSSNLNKGRYDYYYWILT 318
            PKSMSS+  ALF LG+   +  GS++V  VN  ++ GG++SW+SSNLNKG  DYYY ++ 
Sbjct: 1078 PKSMSSLAGALFTLGLALSSFAGSLLVNVVNSVTTKGGKESWLSSNLNKGHLDYYYGLIA 1137

Query: 317  MLSVANFIYFVVCSYLYGDCEGQRSKIWDESEGQNDVDLSKSKELPA 177
            +L + NFIYF+VC  LYG CE +++K+     G+ +VD      LP+
Sbjct: 1138 VLGMINFIYFLVCCRLYGPCEDEKTKL----SGEVEVDQFLYSALPS 1180


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