BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014945
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   110   9e-23
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containi...   101   7e-20

>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/65 (81%), Positives = 60/65 (92%)
 Frame = +1

Query: 49  KVYVRGGLFEKSRQLLLELETLGYARDEMPYCLLMDGLAKAGHVNEAKSIFNEMVTKDVK 228
           KVYVRGGLFEKS+QLLLELETLGYA DEMPYCLLMDGL+KAG V+EA+S F+EM  K+VK
Sbjct: 330 KVYVRGGLFEKSQQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEMKEKNVK 389

Query: 229 SDGYS 243
           SDGY+
Sbjct: 390 SDGYA 394


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Cucumis sativus]
          Length = 668

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/65 (73%), Positives = 58/65 (89%)
 Frame = +1

Query: 49  KVYVRGGLFEKSRQLLLELETLGYARDEMPYCLLMDGLAKAGHVNEAKSIFNEMVTKDVK 228
           KVYVRGGLFEKSR+LL ELE+LGY  +EMPYCLLMDGLAKAG + EAK++F+EM  K+VK
Sbjct: 321 KVYVRGGLFEKSRKLLSELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKNVK 380

Query: 229 SDGYS 243
           +DGY+
Sbjct: 381 TDGYA 385


>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic [Vitis vinifera]
           gi|298204537|emb|CBI23812.3| unnamed protein product
           [Vitis vinifera]
          Length = 659

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/64 (79%), Positives = 54/64 (84%)
 Frame = +1

Query: 49  KVYVRGGLFEKSRQLLLELETLGYARDEMPYCLLMDGLAKAGHVNEAKSIFNEMVTKDVK 228
           KVYVRGGLFEKSR+LL ELE LGYA DEMPYCLLMDGLAK+  + EAKSIF EM  K VK
Sbjct: 319 KVYVRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAKSRRILEAKSIFEEMKKKQVK 378

Query: 229 SDGY 240
           SDGY
Sbjct: 379 SDGY 382


>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
           predicted protein [Populus trichocarpa]
          Length = 562

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/65 (75%), Positives = 58/65 (89%)
 Frame = +1

Query: 49  KVYVRGGLFEKSRQLLLELETLGYARDEMPYCLLMDGLAKAGHVNEAKSIFNEMVTKDVK 228
           KVYVRGGLFEKSR LL+EL+TLG+A++EMPYCLLMDGLAK G ++EA+S+FNEM  K VK
Sbjct: 222 KVYVRGGLFEKSRDLLVELDTLGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVK 281

Query: 229 SDGYS 243
           S GYS
Sbjct: 282 SGGYS 286


>ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
           chloroplastic-like [Glycine max]
          Length = 630

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/65 (70%), Positives = 57/65 (87%)
 Frame = +1

Query: 49  KVYVRGGLFEKSRQLLLELETLGYARDEMPYCLLMDGLAKAGHVNEAKSIFNEMVTKDVK 228
           KVYV+GGLFEKSR+LL EL++LGYA DEMPYC+ MDGLAKAG ++EAK IF+EM+   V+
Sbjct: 289 KVYVKGGLFEKSRELLAELKSLGYAEDEMPYCIFMDGLAKAGQIHEAKLIFDEMMKNHVR 348

Query: 229 SDGYS 243
           SDGY+
Sbjct: 349 SDGYA 353