BLASTX nr result

ID: Coptis24_contig00014938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014938
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]     80   2e-13
emb|CBI21102.3| unnamed protein product [Vitis vinifera]               80   2e-13
dbj|BAK04431.1| predicted protein [Hordeum vulgare subsp. vulgare]     72   6e-11
ref|XP_002324889.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|NP_001048404.1| Os02g0798700 [Oryza sativa Japonica Group] g...    70   2e-10

>ref|XP_002283008.2| PREDICTED: neurochondrin-like [Vitis vinifera]
          Length = 629

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = -2

Query: 287 EKMMKSVSAENVSEINESYIDKNMGIMMVNGPNETMGKVLEFLQEAKDHDHRKGED-FDS 111
           EK +K +S  NV E   + ID+N    +++G NET+G VLE+LQ+AKDH  +KG+D   S
Sbjct: 351 EKTIKLIS--NVVEDEVNPIDENTLSKVISGLNETVGVVLEYLQDAKDHGQKKGDDLLAS 408

Query: 110 VLFVGKYLAESPFACMLKALDLLEYLLSIK 21
           V  +G YLAE+P AC  K  +LLE++LSI+
Sbjct: 409 VRLIGSYLAETPLACREKVRELLEFMLSIE 438


>emb|CBI21102.3| unnamed protein product [Vitis vinifera]
          Length = 713

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = -2

Query: 287 EKMMKSVSAENVSEINESYIDKNMGIMMVNGPNETMGKVLEFLQEAKDHDHRKGED-FDS 111
           EK +K +S  NV E   + ID+N    +++G NET+G VLE+LQ+AKDH  +KG+D   S
Sbjct: 435 EKTIKLIS--NVVEDEVNPIDENTLSKVISGLNETVGVVLEYLQDAKDHGQKKGDDLLAS 492

Query: 110 VLFVGKYLAESPFACMLKALDLLEYLLSIK 21
           V  +G YLAE+P AC  K  +LLE++LSI+
Sbjct: 493 VRLIGSYLAETPLACREKVRELLEFMLSIE 522


>dbj|BAK04431.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 639

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
 Frame = -2

Query: 287 EKMMKSVSAENVSEINESYIDKNMGIMMV-NGPNETMGKVLEFLQEAKDHDHRKGED-FD 114
           E+++K +S  +  E   S       IM V  G NET+G VL+FLQ+AKDH  RKG+D   
Sbjct: 361 ERIIKMISDASSGEGEPSQTICERTIMQVITGLNETIGLVLDFLQDAKDHGQRKGDDLLA 420

Query: 113 SVLFVGKYLAESPFACMLKALDLLEYLLSIK 21
           +V  VG YLAE+P+AC  K   LLE++ SI+
Sbjct: 421 AVRIVGSYLAETPYACQEKTGHLLEFIFSIE 451


>ref|XP_002324889.1| predicted protein [Populus trichocarpa] gi|222866323|gb|EEF03454.1|
           predicted protein [Populus trichocarpa]
          Length = 618

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
 Frame = -2

Query: 287 EKMMKSVSAENVSEINESYIDKNMGIMMVNGPNETMGKVLEFLQEAKDHDHRKGED-FDS 111
           E+++K  S   + E+  S I +   I ++NG NET+  VLE+L++AK+H  +KG D   S
Sbjct: 348 ERVIKLTST--MDEVEGSIIGERTLIKVINGLNETINVVLEYLEDAKEHGQKKGNDLLAS 405

Query: 110 VLFVGKYLAESPFACMLKALDLLEYLLSIK 21
           V  VG YLAE+P AC  K  +LL+Y+L+I+
Sbjct: 406 VRVVGSYLAETPNACKEKVRELLDYMLTIE 435


>ref|NP_001048404.1| Os02g0798700 [Oryza sativa Japonica Group]
           gi|51091323|dbj|BAD36058.1| neurochondrin protein-like
           [Oryza sativa Japonica Group]
           gi|113537935|dbj|BAF10318.1| Os02g0798700 [Oryza sativa
           Japonica Group] gi|215704871|dbj|BAG94899.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215736947|dbj|BAG95876.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 639

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 7/96 (7%)
 Frame = -2

Query: 287 EKMMKSVSAENVSE------INESYIDKNMGIMMVNGPNETMGKVLEFLQEAKDHDHRKG 126
           E+++K +S  +  E      I ES I K      + G NET+G VL+FLQ+AKDH  RKG
Sbjct: 361 ERIIKMISNASSGEGAVCQTIRESTIMK-----AITGLNETVGLVLDFLQDAKDHGQRKG 415

Query: 125 ED-FDSVLFVGKYLAESPFACMLKALDLLEYLLSIK 21
           +D   +V  VG YLAE+P+AC  K   LLE++ S++
Sbjct: 416 DDLLAAVRIVGSYLAEAPYACKEKIRHLLEFIFSVE 451


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