BLASTX nr result

ID: Coptis24_contig00014937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014937
         (1619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269147.1| PREDICTED: aminomethyltransferase [Vitis vin...   568   e-159
ref|XP_003525008.1| PREDICTED: aminomethyltransferase-like [Glyc...   546   e-153
ref|XP_003629967.1| Aminomethyltransferase [Medicago truncatula]...   540   e-151
ref|XP_002886571.1| At1g60990 [Arabidopsis lyrata subsp. lyrata]...   534   e-149
ref|XP_004140110.1| PREDICTED: aminomethyltransferase-like [Cucu...   531   e-148

>ref|XP_002269147.1| PREDICTED: aminomethyltransferase [Vitis vinifera]
            gi|298204501|emb|CBI23776.3| unnamed protein product
            [Vitis vinifera]
          Length = 430

 Score =  568 bits (1464), Expect = e-159
 Identities = 276/387 (71%), Positives = 326/387 (84%), Gaps = 1/387 (0%)
 Frame = -3

Query: 1518 NHVFKMPNKLXXXXXXXXXXXSFEFNLAPPPIDHDLLDTMVDLGAKVSEEGVVETFGNDD 1339
            NH F+ P K               F+L+PPPID DLLDT+ + GA+VSE G++ETF NDD
Sbjct: 47   NHAFRSPEKFFTPLAAASP-----FDLSPPPIDLDLLDTVTEAGAEVSEAGIIETFDNDD 101

Query: 1338 EAIHAAYEGVAVVDLTHFGRIRVTGEDRIQFLHNQTTANFEGLSEGQGCDTVFVTPTART 1159
            EA+ A   GV VVDL+HFGRIRV+G+DRIQFLHNQ+TANFE L EGQGCDTVFVTPTART
Sbjct: 102  EALDAVDNGVVVVDLSHFGRIRVSGDDRIQFLHNQSTANFECLQEGQGCDTVFVTPTART 161

Query: 1158 IDIAHAWVMKSAITLVVSPITCRSITEMLTKYIFFADKVEIQDITKQTCFFTLIGPKSNQ 979
            ID+AHAW+MK+A+TLVVSP+TC SI EMLTKYIFFADKVEIQDITK+T FF L+GPKS+Q
Sbjct: 162  IDVAHAWIMKNAVTLVVSPVTCGSIIEMLTKYIFFADKVEIQDITKKTSFFVLVGPKSHQ 221

Query: 978  VMEELNLGDLVGQPYGTHQHYSVSGTPITIGVGSVIAEDGFSLLLSPAAAGSVWKTLLSL 799
            VME+LNLG LVG+PYGTHQH+ V+G PIT+GVG+ I+EDGFS ++SPA AGSVWK LLS 
Sbjct: 222  VMEDLNLGALVGKPYGTHQHFMVNGMPITVGVGNAISEDGFSFMMSPAIAGSVWKALLSQ 281

Query: 798  GAVPMGANAWERFRIFQGRPAPDRELSDEFNVLEAGLWNAVSLNKGCYKGQETISRLITY 619
            GA+PMG+NAWE+ RIFQGRPAP +EL++EFNVLEAGLWN++SLNKGCYKGQETISRLITY
Sbjct: 282  GAIPMGSNAWEKLRIFQGRPAPGKELTNEFNVLEAGLWNSISLNKGCYKGQETISRLITY 341

Query: 618  DGVKLKLYGIYLPAPAEPGIPITIDGKKVGKLTSCAVGREANEHFGLGYIKRRTASDGDK 439
            DGVK +L+GI L  PAEPG PIT DGKKVGKLTS A GR  +EHFGLGYIKR+ AS+G+ 
Sbjct: 342  DGVKQRLWGISLSGPAEPGSPITADGKKVGKLTSYACGRTESEHFGLGYIKRQAASNGNT 401

Query: 438  VLVGD-IVGTLVEVPYLVRQTPLTKTS 361
            V+VGD I GT+VEVP+L  Q+P +K+S
Sbjct: 402  VIVGDNIAGTVVEVPFLAWQSPPSKSS 428


>ref|XP_003525008.1| PREDICTED: aminomethyltransferase-like [Glycine max]
          Length = 423

 Score =  546 bits (1408), Expect = e-153
 Identities = 264/358 (73%), Positives = 308/358 (86%), Gaps = 1/358 (0%)
 Frame = -3

Query: 1446 FNLAPPPIDHDLLDTMVDLGAKVSEEGVVETFGNDDEAIHAAYEGVAVVDLTHFGRIRVT 1267
            F+L+PPPIDHD LDT+   G ++S EG++ETF NDDEA+ A   GV VVDL+HFGRIRV+
Sbjct: 62   FDLSPPPIDHDFLDTVKTAGGEISGEGIIETFHNDDEALAAVDNGVVVVDLSHFGRIRVS 121

Query: 1266 GEDRIQFLHNQTTANFEGLSEGQGCDTVFVTPTARTIDIAHAWVMKSAITLVVSPITCRS 1087
            GEDRIQFLHNQ+TANFE L EGQGCDTVFVTPTARTIDIAHAW+MK+AITLVVSP TC +
Sbjct: 122  GEDRIQFLHNQSTANFESLHEGQGCDTVFVTPTARTIDIAHAWLMKNAITLVVSPETCTT 181

Query: 1086 ITEMLTKYIFFADKVEIQDITKQTCFFTLIGPKSNQVMEELNLGDLVGQPYGTHQHYSVS 907
            ITEML KYIFFADKVEIQDITKQT FF L+GPKS QVME LNLGDLVG+PYGTH H++V 
Sbjct: 182  ITEMLNKYIFFADKVEIQDITKQTSFFVLVGPKSGQVMENLNLGDLVGKPYGTHLHFNVD 241

Query: 906  GTPITIGVGSVIAEDGFSLLLSPAAAGSVWKTLLSLGAVPMGANAWERFRIFQGRPAPDR 727
              PITIGVG++I+EDGFSLL+SPAAA S+WK +LS GA+PMG+NAW + RI +GRP P  
Sbjct: 242  KQPITIGVGNIISEDGFSLLMSPAAAASIWKAILSQGAIPMGSNAWNKLRIIRGRPTPGM 301

Query: 726  ELSDEFNVLEAGLWNAVSLNKGCYKGQETISRLITYDGVKLKLYGIYLPAPAEPGIPITI 547
            EL++EFNVLEA LWN+VSLNKGCYKGQETISRLITYDG+K +L+G +L A AEPG  IT+
Sbjct: 302  ELTNEFNVLEACLWNSVSLNKGCYKGQETISRLITYDGIKQRLWGFHLSAAAEPGSIITV 361

Query: 546  DGKKVGKLTSCAVGREANEHFGLGYIKRRTASDGDKVLVGD-IVGTLVEVPYLVRQTP 376
            DGKKVGKLTS   GR+ +EHFGLGYIKRR AS+GD V+VGD I GT+VEVP+L++Q P
Sbjct: 362  DGKKVGKLTSYTSGRKQSEHFGLGYIKRRAASEGDTVIVGDNIKGTVVEVPFLLQQRP 419


>ref|XP_003629967.1| Aminomethyltransferase [Medicago truncatula]
            gi|355523989|gb|AET04443.1| Aminomethyltransferase
            [Medicago truncatula]
          Length = 422

 Score =  540 bits (1391), Expect = e-151
 Identities = 262/365 (71%), Positives = 312/365 (85%), Gaps = 1/365 (0%)
 Frame = -3

Query: 1446 FNLAPPPIDHDLLDTMVDLGAKVSEEGVVETFGNDDEAIHAAYEGVAVVDLTHFGRIRVT 1267
            F+L+PPPIDHD LDT+   GA+VS EG+VETF ND+EA+ AA  GV VVDL+HFGRIRV+
Sbjct: 58   FDLSPPPIDHDFLDTVKTAGAEVSGEGIVETFHNDEEALDAADNGVVVVDLSHFGRIRVS 117

Query: 1266 GEDRIQFLHNQTTANFEGLSEGQGCDTVFVTPTARTIDIAHAWVMKSAITLVVSPITCRS 1087
            G+DR+QFLHNQ+TANFEGL  GQGCDTVFVTPTARTIDIAHAW+MK+AITLVVS  T R+
Sbjct: 118  GDDRVQFLHNQSTANFEGLQAGQGCDTVFVTPTARTIDIAHAWIMKNAITLVVSAETSRT 177

Query: 1086 ITEMLTKYIFFADKVEIQDITKQTCFFTLIGPKSNQVMEELNLGDLVGQPYGTHQHYSVS 907
            ITEML KYIFFADKVEIQDITKQT  F L GPKS QVME LNLGDL+G+PYGTHQH+ V 
Sbjct: 178  ITEMLNKYIFFADKVEIQDITKQTSLFVLAGPKSGQVMESLNLGDLIGKPYGTHQHFYVD 237

Query: 906  GTPITIGVGSVIAEDGFSLLLSPAAAGSVWKTLLSLGAVPMGANAWERFRIFQGRPAPDR 727
              PITIGVG++I+E GFSL++SPAAA SVWK +L+ GAV MG+NAW + R+ QGRPAP  
Sbjct: 238  KQPITIGVGNIISEGGFSLMMSPAAAPSVWKAILAQGAVAMGSNAWNKLRVIQGRPAPGM 297

Query: 726  ELSDEFNVLEAGLWNAVSLNKGCYKGQETISRLITYDGVKLKLYGIYLPAPAEPGIPITI 547
            EL++EFNV+EA LWN++SLNKGCYKGQETI+RLITYDGVK +L+G +L A AEPG  IT+
Sbjct: 298  ELTNEFNVMEACLWNSISLNKGCYKGQETIARLITYDGVKQRLWGFHLSAAAEPGSIITV 357

Query: 546  DGKKVGKLTSCAVGREANEHFGLGYIKRRTASDGDKVLVGD-IVGTLVEVPYLVRQTPLT 370
            DGKKVGKLTS A GR+ +EHFGLGYIKR+TAS+GD V+VGD I+GT+VE P+L +Q PL+
Sbjct: 358  DGKKVGKLTSYASGRKPSEHFGLGYIKRQTASEGDSVIVGDNIIGTIVEAPFLSQQRPLS 417

Query: 369  KTSKT 355
             +S +
Sbjct: 418  GSSSS 422


>ref|XP_002886571.1| At1g60990 [Arabidopsis lyrata subsp. lyrata]
            gi|297332412|gb|EFH62830.1| At1g60990 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 423

 Score =  534 bits (1376), Expect = e-149
 Identities = 257/366 (70%), Positives = 304/366 (83%), Gaps = 1/366 (0%)
 Frame = -3

Query: 1449 EFNLAPPPIDHDLLDTMVDLGAKVSEEGVVETFGNDDEAIHAAYEGVAVVDLTHFGRIRV 1270
            +F+ +PPPIDHD LDT+   G KVSE+G+VE+F NDDEA+ A   GV VVDL+HFGRIRV
Sbjct: 58   QFDFSPPPIDHDFLDTISVAGGKVSEDGIVESFDNDDEALDAFDNGVVVVDLSHFGRIRV 117

Query: 1269 TGEDRIQFLHNQTTANFEGLSEGQGCDTVFVTPTARTIDIAHAWVMKSAITLVVSPITCR 1090
            +G+DR  FLHNQTTANFE LSEGQGCDTVFVTPTARTIDIAHAW+MK+AI L VSP TC+
Sbjct: 118  SGDDRAHFLHNQTTANFESLSEGQGCDTVFVTPTARTIDIAHAWIMKNAILLTVSPTTCQ 177

Query: 1089 SITEMLTKYIFFADKVEIQDITKQTCFFTLIGPKSNQVMEELNLGDLVGQPYGTHQHYSV 910
            SI EML KYIFFADKVEI+DITKQTC F L GPKSNQ+M +LNLGDL+GQPYG HQHYS 
Sbjct: 178  SIIEMLNKYIFFADKVEIKDITKQTCLFALAGPKSNQIMSKLNLGDLIGQPYGNHQHYSF 237

Query: 909  SGTPITIGVGSVIAEDGFSLLLSPAAAGSVWKTLLSLGAVPMGANAWERFRIFQGRPAPD 730
             G PIT+GVGS+I+++GF++L+SP  A SVWKTLL+ GA+PMG+ AWE+ RI QGRPAP+
Sbjct: 238  DGMPITVGVGSLISDEGFTMLMSPGGAVSVWKTLLAEGAIPMGSVAWEKLRITQGRPAPE 297

Query: 729  RELSDEFNVLEAGLWNAVSLNKGCYKGQETISRLITYDGVKLKLYGIYLPAPAEPGIPIT 550
            RELS E+NVLEAGLWN++SLNKGCYKGQETI+RL+TYDG+K  L G+ L APAEPG PI 
Sbjct: 298  RELSKEYNVLEAGLWNSISLNKGCYKGQETIARLMTYDGIKQWLCGLNLSAPAEPGSPII 357

Query: 549  IDGKKVGKLTSCAVGREANEHFGLGYIKRRTASDGDKVLVG-DIVGTLVEVPYLVRQTPL 373
            +DGKKVGKLTS   GRE + HFGLGYIK++ AS G+ V +G DI G + EVPYL RQ P 
Sbjct: 358  VDGKKVGKLTSYTRGREGSGHFGLGYIKKQAASIGNTVTIGEDISGIVSEVPYLARQHPP 417

Query: 372  TKTSKT 355
            +  S +
Sbjct: 418  SANSSS 423


>ref|XP_004140110.1| PREDICTED: aminomethyltransferase-like [Cucumis sativus]
            gi|449511901|ref|XP_004164084.1| PREDICTED:
            aminomethyltransferase-like [Cucumis sativus]
          Length = 445

 Score =  531 bits (1367), Expect = e-148
 Identities = 252/365 (69%), Positives = 308/365 (84%), Gaps = 1/365 (0%)
 Frame = -3

Query: 1446 FNLAPPPIDHDLLDTMVDLGAKVSEEGVVETFGNDDEAIHAAYEGVAVVDLTHFGRIRVT 1267
            F+L+PPPID DLL+     GA++S++G++ETF ND+EA+ AA  GVAVVDL+HFGR+RV+
Sbjct: 73   FDLSPPPIDEDLLEAAAVEGARISDDGIIETFHNDEEALDAANNGVAVVDLSHFGRLRVS 132

Query: 1266 GEDRIQFLHNQTTANFEGLSEGQGCDTVFVTPTARTIDIAHAWVMKSAITLVVSPITCRS 1087
            G+DR QFLHNQ+TANFE L +GQGC TVFVTPTARTIDIA AW+MK+AITL+VSP+T  S
Sbjct: 133  GDDRCQFLHNQSTANFESLRQGQGCSTVFVTPTARTIDIAQAWIMKNAITLIVSPVTRES 192

Query: 1086 ITEMLTKYIFFADKVEIQDITKQTCFFTLIGPKSNQVMEELNLGDLVGQPYGTHQHYSVS 907
            I  ML KYIF ADKVEIQDIT QT    L+GPKSNQ+ME+LNLG + G+PYGTHQH+SV+
Sbjct: 193  IIRMLNKYIFVADKVEIQDITNQTSLLVLVGPKSNQIMEDLNLGSIAGEPYGTHQHFSVN 252

Query: 906  GTPITIGVGSVIAEDGFSLLLSPAAAGSVWKTLLSLGAVPMGANAWERFRIFQGRPAPDR 727
            G PIT+GVG+VI+E+GFSLL+SPA AG VWK L+SLGAVPMG+ AWE+ RI QG PAP +
Sbjct: 253  GMPITVGVGNVISEEGFSLLISPAVAGPVWKALVSLGAVPMGSRAWEKLRISQGMPAPQK 312

Query: 726  ELSDEFNVLEAGLWNAVSLNKGCYKGQETISRLITYDGVKLKLYGIYLPAPAEPGIPITI 547
            EL+DEFNVLEAGLWN++SLNKGCYKGQETISRLITYDGVK +L+G+ L    EPG PITI
Sbjct: 313  ELTDEFNVLEAGLWNSISLNKGCYKGQETISRLITYDGVKQRLWGLQLSDSVEPGSPITI 372

Query: 546  DGKKVGKLTSCAVGREANEHFGLGYIKRRTASDGDKVLVGD-IVGTLVEVPYLVRQTPLT 370
            DGK+VGKLTS A GR+ +EHFGLGYIK++ AS GD V+VG+  +G +VEVP+L RQ PL+
Sbjct: 373  DGKRVGKLTSYAPGRKESEHFGLGYIKKKAASVGDSVIVGENTIGKVVEVPFLARQQPLS 432

Query: 369  KTSKT 355
             +S +
Sbjct: 433  NSSSS 437


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