BLASTX nr result

ID: Coptis24_contig00014931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014931
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520202.1| actin binding protein, putative [Ricinus com...   114   8e-24
ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
emb|CBI32075.3| unnamed protein product [Vitis vinifera]              110   1e-22
emb|CBI22180.3| unnamed protein product [Vitis vinifera]              110   2e-22
ref|XP_002277455.1| PREDICTED: formin-like protein 4 [Vitis vini...   110   2e-22

>ref|XP_002520202.1| actin binding protein, putative [Ricinus communis]
            gi|223540694|gb|EEF42257.1| actin binding protein,
            putative [Ricinus communis]
          Length = 849

 Score =  114 bits (285), Expect = 8e-24
 Identities = 57/95 (60%), Positives = 70/95 (73%)
 Frame = -3

Query: 483  ELKVVKEEQTRVMDLVKRTTEYYQAGVSKDKTAHPFQLFVRIKDFLGMVDQACIDITRNQ 304
            ELKV++EE+ R+M+LV++TTEYYQAG SK K A P QLF  IKDFLGMVD+ CI+ITRN 
Sbjct: 742  ELKVLREEENRIMELVRKTTEYYQAGASKKKGAPPLQLFAIIKDFLGMVDRVCIEITRNM 801

Query: 303  QKKRATMIKVGSSSPPQSAALRDRASFPNLPAHFM 199
            Q+++      GSS  P+S A R    FPNLP HFM
Sbjct: 802  QRRKTPSPNFGSS--PKSPASRVPVKFPNLPEHFM 834


>ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|222852588|gb|EEE90135.1|
           predicted protein [Populus trichocarpa]
          Length = 760

 Score =  113 bits (282), Expect = 2e-23
 Identities = 60/96 (62%), Positives = 70/96 (72%)
 Frame = -3

Query: 486 EELKVVKEEQTRVMDLVKRTTEYYQAGVSKDKTAHPFQLFVRIKDFLGMVDQACIDITRN 307
           EELK + +EQTRVMDLVK+TTEYY AG SKD+ AH  QLF  IKDFL MVDQ CI+ITRN
Sbjct: 652 EELKGLTKEQTRVMDLVKKTTEYYHAGASKDQEAHALQLFSIIKDFLCMVDQVCIEITRN 711

Query: 306 QQKKRATMIKVGSSSPPQSAALRDRASFPNLPAHFM 199
            Q+++ +   V SS  P+S A R    FPNLP HFM
Sbjct: 712 LQRRKTSSRSVESS--PKSPASRIPVRFPNLPQHFM 745


>emb|CBI32075.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  110 bits (275), Expect = 1e-22
 Identities = 58/98 (59%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
 Frame = -3

Query: 486 EELKVVKEEQTRVMDLVKRTTEYYQAGVSKDKTAHPFQLFVRIKDFLGMVDQACIDITRN 307
           EEL+ V+EEQTRVM+LV+RTTEYYQ   SK+K A P QLFV +K+FLGMVDQ C+DI RN
Sbjct: 615 EELREVREEQTRVMELVRRTTEYYQPRSSKNKEASPVQLFVIVKNFLGMVDQVCVDIARN 674

Query: 306 QQKKRATMIKVGSS--SPPQSAALRDRASFPNLPAHFM 199
            Q+++ T   +GSS  SPP     R    FPNLP +FM
Sbjct: 675 LQRRKTTTASLGSSTKSPPS----RIPVKFPNLPPNFM 708


>emb|CBI22180.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/96 (57%), Positives = 70/96 (72%)
 Frame = -3

Query: 486 EELKVVKEEQTRVMDLVKRTTEYYQAGVSKDKTAHPFQLFVRIKDFLGMVDQACIDITRN 307
           EEL+ V+EEQTRVM+L++RTTEYYQ   SK+K A P QLF+ +KDFLGMVDQ C+DI RN
Sbjct: 641 EELREVREEQTRVMELLRRTTEYYQPRSSKNKEASPLQLFIIVKDFLGMVDQVCVDIARN 700

Query: 306 QQKKRATMIKVGSSSPPQSAALRDRASFPNLPAHFM 199
            Q+++ T   +G SS  +S   R    FPNLP +FM
Sbjct: 701 LQRRKTTTASLGPSS-TKSPPSRIPVKFPNLPPNFM 735


>ref|XP_002277455.1| PREDICTED: formin-like protein 4 [Vitis vinifera]
          Length = 819

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/96 (57%), Positives = 70/96 (72%)
 Frame = -3

Query: 486 EELKVVKEEQTRVMDLVKRTTEYYQAGVSKDKTAHPFQLFVRIKDFLGMVDQACIDITRN 307
           EEL+ V+EEQTRVM+L++RTTEYYQ   SK+K A P QLF+ +KDFLGMVDQ C+DI RN
Sbjct: 709 EELREVREEQTRVMELLRRTTEYYQPRSSKNKEASPLQLFIIVKDFLGMVDQVCVDIARN 768

Query: 306 QQKKRATMIKVGSSSPPQSAALRDRASFPNLPAHFM 199
            Q+++ T   +G SS  +S   R    FPNLP +FM
Sbjct: 769 LQRRKTTTASLGPSS-TKSPPSRIPVKFPNLPPNFM 803


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