BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014927
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165231.1| PREDICTED: RNA-binding protein 28-like, part...    92   6e-17
ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucu...    92   6e-17
ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glyc...    89   3e-16
emb|CBI38027.3| unnamed protein product [Vitis vinifera]               88   8e-16
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...    88   8e-16

>ref|XP_004165231.1| PREDICTED: RNA-binding protein 28-like, partial [Cucumis sativus]
          Length = 678

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/74 (67%), Positives = 53/74 (71%)
 Frame = +3

Query: 270 QEGVIXXXXXXXXXXXXXDMMKRQMLEKKSTTKLQSPNFHVSRTRLMIHNLPKSMKSMTE 449
           QEG+I             DM KRQ LEKK TTKLQSPNFHVSRTRL+IHNLPKSMK   E
Sbjct: 336 QEGIILEGTPAAEGVSASDMEKRQRLEKKRTTKLQSPNFHVSRTRLVIHNLPKSMK---E 392

Query: 450 KELKKLCIDAVLSR 491
           KEL KLCI+AV SR
Sbjct: 393 KELHKLCIEAVTSR 406



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/66 (57%), Positives = 53/66 (80%)
 Frame = +1

Query: 79  VQPKPEKSRKNESTIIEQNKDENDLQTTVFVSNLPFDIEREEVKQQFSVFGEVQSFIPVL 258
           V  +P K  +++++I++Q  DE DL+ TV++ NLPFDI+ EEVKQ+FS FGEV SF+PVL
Sbjct: 202 VSNEPGKLSESKTSILKQT-DEEDLKRTVYIGNLPFDIDNEEVKQRFSGFGEVLSFVPVL 260

Query: 259 HQVTKK 276
           HQVTK+
Sbjct: 261 HQVTKR 266


>ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
          Length = 966

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 50/74 (67%), Positives = 53/74 (71%)
 Frame = +3

Query: 270 QEGVIXXXXXXXXXXXXXDMMKRQMLEKKSTTKLQSPNFHVSRTRLMIHNLPKSMKSMTE 449
           QEG+I             DM KRQ LEKK TTKLQSPNFHVSRTRL+IHNLPKSMK   E
Sbjct: 624 QEGIILEGTPAAEGVSASDMEKRQRLEKKRTTKLQSPNFHVSRTRLVIHNLPKSMK---E 680

Query: 450 KELKKLCIDAVLSR 491
           KEL KLCI+AV SR
Sbjct: 681 KELHKLCIEAVTSR 694



 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 38/66 (57%), Positives = 53/66 (80%)
 Frame = +1

Query: 79  VQPKPEKSRKNESTIIEQNKDENDLQTTVFVSNLPFDIEREEVKQQFSVFGEVQSFIPVL 258
           V  +P K  +++++I++Q  DE DL+ TV++ NLPFDI+ EEVKQ+FS FGEV SF+PVL
Sbjct: 490 VSNEPGKLSESKTSILKQT-DEEDLKRTVYIGNLPFDIDNEEVKQRFSGFGEVLSFVPVL 548

Query: 259 HQVTKK 276
           HQVTK+
Sbjct: 549 HQVTKR 554


>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 956

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/74 (64%), Positives = 54/74 (72%)
 Frame = +3

Query: 270 QEGVIXXXXXXXXXXXXXDMMKRQMLEKKSTTKLQSPNFHVSRTRLMIHNLPKSMKSMTE 449
           +EG+I             DM+KRQ LEKK  TKLQSPNFHVSRTRL+I+NLP   KSM E
Sbjct: 606 KEGLILEGTTAAEGVSASDMLKRQELEKKKKTKLQSPNFHVSRTRLIIYNLP---KSMNE 662

Query: 450 KELKKLCIDAVLSR 491
           KELKKLCIDAV+SR
Sbjct: 663 KELKKLCIDAVISR 676



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
 Frame = +1

Query: 34  DSLLHQNDESVSTLSVQ--PKPEKSRKNESTIIEQNKDENDLQTTVFVSNLPFDIEREEV 207
           D ++   DE   +  V    KPE S +N  +I ++  +E+DLQ TVF+ NLPF+ + EEV
Sbjct: 455 DEIVKDADEKNESGKVSGVSKPEISSRNNLSIPKRT-EEDDLQGTVFICNLPFECDNEEV 513

Query: 208 KQQFSVFGEVQSFIPVLHQVTKK 276
           KQ+FS FGEV+ F+PVLHQVTK+
Sbjct: 514 KQRFSGFGEVEYFVPVLHQVTKR 536


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/81 (55%), Positives = 59/81 (72%)
 Frame = +1

Query: 34  DSLLHQNDESVSTLSVQPKPEKSRKNESTIIEQNKDENDLQTTVFVSNLPFDIEREEVKQ 213
           D L   ++ES     V  +PE S K++   +   + E+DLQ T+F+SNLPFDI++EEVKQ
Sbjct: 452 DVLKKTSNESEKASDVT-EPENSSKSKLLNLRPIESEDDLQRTIFISNLPFDIDKEEVKQ 510

Query: 214 QFSVFGEVQSFIPVLHQVTKK 276
           QFS FGEVQSF+PVLHQVTK+
Sbjct: 511 QFSKFGEVQSFVPVLHQVTKR 531



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/74 (59%), Positives = 52/74 (70%)
 Frame = +3

Query: 270 QEGVIXXXXXXXXXXXXXDMMKRQMLEKKSTTKLQSPNFHVSRTRLMIHNLPKSMKSMTE 449
           +EG+I             DM KR ML ++  TKL+SPNFHVSRTRL+I+NLP   KSMTE
Sbjct: 601 KEGLIVEGTPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRTRLIIYNLP---KSMTE 657

Query: 450 KELKKLCIDAVLSR 491
           KE+KKLCIDAV SR
Sbjct: 658 KEVKKLCIDAVTSR 671


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/81 (55%), Positives = 59/81 (72%)
 Frame = +1

Query: 34  DSLLHQNDESVSTLSVQPKPEKSRKNESTIIEQNKDENDLQTTVFVSNLPFDIEREEVKQ 213
           D L   ++ES     V  +PE S K++   +   + E+DLQ T+F+SNLPFDI++EEVKQ
Sbjct: 471 DVLKKTSNESEKASDVT-EPENSSKSKLLNLRPIESEDDLQRTIFISNLPFDIDKEEVKQ 529

Query: 214 QFSVFGEVQSFIPVLHQVTKK 276
           QFS FGEVQSF+PVLHQVTK+
Sbjct: 530 QFSKFGEVQSFVPVLHQVTKR 550



 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/74 (59%), Positives = 52/74 (70%)
 Frame = +3

Query: 270 QEGVIXXXXXXXXXXXXXDMMKRQMLEKKSTTKLQSPNFHVSRTRLMIHNLPKSMKSMTE 449
           +EG+I             DM KR ML ++  TKL+SPNFHVSRTRL+I+NLP   KSMTE
Sbjct: 620 KEGLIVEGTPAAEGVSASDMSKRHMLARQKDTKLESPNFHVSRTRLIIYNLP---KSMTE 676

Query: 450 KELKKLCIDAVLSR 491
           KE+KKLCIDAV SR
Sbjct: 677 KEVKKLCIDAVTSR 690