BLASTX nr result
ID: Coptis24_contig00014922
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014922 (549 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513378.1| ubiquitin, putative [Ricinus communis] gi|22... 138 6e-31 ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2... 137 1e-30 ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula] gi|355518... 136 2e-30 gb|AEO32977.1| hypothetical protein [Amblyomma maculatum] 136 2e-30 sp|P0C073.2|RUB1_DESAN RecName: Full=Ubiquitin-NEDD8-like protei... 135 5e-30 >ref|XP_002513378.1| ubiquitin, putative [Ricinus communis] gi|223547286|gb|EEF48781.1| ubiquitin, putative [Ricinus communis] Length = 154 Score = 138 bits (347), Expect = 6e-31 Identities = 79/124 (63%), Positives = 81/124 (65%) Frame = -2 Query: 548 YNIQKESTLHLVLRLRGGTMIKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQR 369 YNIQKESTLHLVLRLRGGTMIKVKTLTGK IKERVEEKEGIPPVQQR Sbjct: 59 YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118 Query: 368 LIYAGKQLADDKTXXXXXXXXXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALR 189 LIYAGKQL DDKTA++YNIEGGSVLHLVLALR Sbjct: 119 LIYAGKQL----------------------------GDDKTARDYNIEGGSVLHLVLALR 150 Query: 188 GGCF 177 GGCF Sbjct: 151 GGCF 154 Score = 63.2 bits (152), Expect = 3e-08 Identities = 43/102 (42%), Positives = 51/102 (50%) Frame = -2 Query: 488 IKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQRLIYAGKQLADDKTXXXXXXX 309 I VKTLTGK +K ++++KEGIPP QQRLI+AGKQL D +T Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT------- 55 Query: 308 XXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALRGG 183 LAD YNI+ S LHLVL LRGG Sbjct: 56 ---------------LAD------YNIQKESTLHLVLRLRGG 76 >ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max] gi|356556999|ref|XP_003546806.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max] gi|255627501|gb|ACU14095.1| unknown [Glycine max] Length = 154 Score = 137 bits (344), Expect = 1e-30 Identities = 80/124 (64%), Positives = 81/124 (65%) Frame = -2 Query: 548 YNIQKESTLHLVLRLRGGTMIKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQR 369 YNIQKESTLHLVLRLRGGTMIKVKTLTGK IKERVEEKEGIPPVQQR Sbjct: 59 YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118 Query: 368 LIYAGKQLADDKTXXXXXXXXXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALR 189 LIYAGKQLA DDKTAKEYNIEGGSVLHLVLALR Sbjct: 119 LIYAGKQLA----------------------------DDKTAKEYNIEGGSVLHLVLALR 150 Query: 188 GGCF 177 GG + Sbjct: 151 GGTY 154 Score = 63.2 bits (152), Expect = 3e-08 Identities = 43/102 (42%), Positives = 51/102 (50%) Frame = -2 Query: 488 IKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQRLIYAGKQLADDKTXXXXXXX 309 I VKTLTGK +K ++++KEGIPP QQRLI+AGKQL D +T Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT------- 55 Query: 308 XXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALRGG 183 LAD YNI+ S LHLVL LRGG Sbjct: 56 ---------------LAD------YNIQKESTLHLVLRLRGG 76 >ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula] gi|355518872|gb|AET00496.1| Bi-ubiquitin [Medicago truncatula] gi|388497058|gb|AFK36595.1| unknown [Medicago truncatula] Length = 153 Score = 136 bits (342), Expect = 2e-30 Identities = 80/122 (65%), Positives = 80/122 (65%) Frame = -2 Query: 548 YNIQKESTLHLVLRLRGGTMIKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQR 369 YNIQKESTLHLVLRLRGGTMIKVKTLTGK IKERVEEKEGIPPVQQR Sbjct: 59 YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118 Query: 368 LIYAGKQLADDKTXXXXXXXXXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALR 189 LIYAGKQLA DDKTAKEYNIEGGSVLHLVLALR Sbjct: 119 LIYAGKQLA----------------------------DDKTAKEYNIEGGSVLHLVLALR 150 Query: 188 GG 183 GG Sbjct: 151 GG 152 Score = 63.2 bits (152), Expect = 3e-08 Identities = 43/102 (42%), Positives = 51/102 (50%) Frame = -2 Query: 488 IKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQRLIYAGKQLADDKTXXXXXXX 309 I VKTLTGK +K ++++KEGIPP QQRLI+AGKQL D +T Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT------- 55 Query: 308 XXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALRGG 183 LAD YNI+ S LHLVL LRGG Sbjct: 56 ---------------LAD------YNIQKESTLHLVLRLRGG 76 >gb|AEO32977.1| hypothetical protein [Amblyomma maculatum] Length = 168 Score = 136 bits (342), Expect = 2e-30 Identities = 80/122 (65%), Positives = 80/122 (65%) Frame = -2 Query: 548 YNIQKESTLHLVLRLRGGTMIKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQR 369 YNIQKESTLHLVLRLRGGTMIKVKTLTGK IKERVEEKEGIPPVQQR Sbjct: 74 YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 133 Query: 368 LIYAGKQLADDKTXXXXXXXXXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALR 189 LIYAGKQLA DDKTAKEYNIEGGSVLHLVLALR Sbjct: 134 LIYAGKQLA----------------------------DDKTAKEYNIEGGSVLHLVLALR 165 Query: 188 GG 183 GG Sbjct: 166 GG 167 Score = 62.8 bits (151), Expect = 3e-08 Identities = 42/100 (42%), Positives = 50/100 (50%) Frame = -2 Query: 482 VKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQRLIYAGKQLADDKTXXXXXXXXX 303 VKTLTGK +K ++++KEGIPP QQRLI+AGKQL D +T Sbjct: 20 VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT--------- 70 Query: 302 XXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALRGG 183 LAD YNI+ S LHLVL LRGG Sbjct: 71 -------------LAD------YNIQKESTLHLVLRLRGG 91 >sp|P0C073.2|RUB1_DESAN RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName: Full=Ubiquitin; Contains: RecName: Full=NEDD8-like protein RUB1; AltName: Full=DaRUB1; AltName: Full=Ubiquitin-related protein 1; Flags: Precursor gi|20562909|gb|AAM22748.1| polyubiquitin 2 [Deschampsia antarctica] Length = 153 Score = 135 bits (339), Expect = 5e-30 Identities = 78/122 (63%), Positives = 80/122 (65%) Frame = -2 Query: 548 YNIQKESTLHLVLRLRGGTMIKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQR 369 YNIQKESTLHLVLRLRGGTMIKVKTLTGK +KERVEEKEGIPPVQQR Sbjct: 59 YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQR 118 Query: 368 LIYAGKQLADDKTXXXXXXXXXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALR 189 LIYAGKQLA DDKTAK+YNIEGGSVLHLVLALR Sbjct: 119 LIYAGKQLA----------------------------DDKTAKDYNIEGGSVLHLVLALR 150 Query: 188 GG 183 GG Sbjct: 151 GG 152 Score = 63.2 bits (152), Expect = 3e-08 Identities = 43/102 (42%), Positives = 51/102 (50%) Frame = -2 Query: 488 IKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQRLIYAGKQLADDKTXXXXXXX 309 I VKTLTGK +K ++++KEGIPP QQRLI+AGKQL D +T Sbjct: 3 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT------- 55 Query: 308 XXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALRGG 183 LAD YNI+ S LHLVL LRGG Sbjct: 56 ---------------LAD------YNIQKESTLHLVLRLRGG 76