BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014922
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513378.1| ubiquitin, putative [Ricinus communis] gi|22...   138   6e-31
ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2...   137   1e-30
ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula] gi|355518...   136   2e-30
gb|AEO32977.1| hypothetical protein [Amblyomma maculatum]             136   2e-30
sp|P0C073.2|RUB1_DESAN RecName: Full=Ubiquitin-NEDD8-like protei...   135   5e-30

>ref|XP_002513378.1| ubiquitin, putative [Ricinus communis] gi|223547286|gb|EEF48781.1|
           ubiquitin, putative [Ricinus communis]
          Length = 154

 Score =  138 bits (347), Expect = 6e-31
 Identities = 79/124 (63%), Positives = 81/124 (65%)
 Frame = -2

Query: 548 YNIQKESTLHLVLRLRGGTMIKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQR 369
           YNIQKESTLHLVLRLRGGTMIKVKTLTGK              IKERVEEKEGIPPVQQR
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 368 LIYAGKQLADDKTXXXXXXXXXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALR 189
           LIYAGKQL                             DDKTA++YNIEGGSVLHLVLALR
Sbjct: 119 LIYAGKQL----------------------------GDDKTARDYNIEGGSVLHLVLALR 150

Query: 188 GGCF 177
           GGCF
Sbjct: 151 GGCF 154



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 43/102 (42%), Positives = 51/102 (50%)
 Frame = -2

Query: 488 IKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQRLIYAGKQLADDKTXXXXXXX 309
           I VKTLTGK              +K ++++KEGIPP QQRLI+AGKQL D +T       
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT------- 55

Query: 308 XXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALRGG 183
                          LAD      YNI+  S LHLVL LRGG
Sbjct: 56  ---------------LAD------YNIQKESTLHLVLRLRGG 76


>ref|XP_003531490.1| PREDICTED: ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
           gi|356556999|ref|XP_003546806.1| PREDICTED:
           ubiquitin-NEDD8-like protein RUB2-like [Glycine max]
           gi|255627501|gb|ACU14095.1| unknown [Glycine max]
          Length = 154

 Score =  137 bits (344), Expect = 1e-30
 Identities = 80/124 (64%), Positives = 81/124 (65%)
 Frame = -2

Query: 548 YNIQKESTLHLVLRLRGGTMIKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQR 369
           YNIQKESTLHLVLRLRGGTMIKVKTLTGK              IKERVEEKEGIPPVQQR
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 368 LIYAGKQLADDKTXXXXXXXXXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALR 189
           LIYAGKQLA                            DDKTAKEYNIEGGSVLHLVLALR
Sbjct: 119 LIYAGKQLA----------------------------DDKTAKEYNIEGGSVLHLVLALR 150

Query: 188 GGCF 177
           GG +
Sbjct: 151 GGTY 154



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 43/102 (42%), Positives = 51/102 (50%)
 Frame = -2

Query: 488 IKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQRLIYAGKQLADDKTXXXXXXX 309
           I VKTLTGK              +K ++++KEGIPP QQRLI+AGKQL D +T       
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT------- 55

Query: 308 XXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALRGG 183
                          LAD      YNI+  S LHLVL LRGG
Sbjct: 56  ---------------LAD------YNIQKESTLHLVLRLRGG 76


>ref|XP_003617537.1| Bi-ubiquitin [Medicago truncatula] gi|355518872|gb|AET00496.1|
           Bi-ubiquitin [Medicago truncatula]
           gi|388497058|gb|AFK36595.1| unknown [Medicago
           truncatula]
          Length = 153

 Score =  136 bits (342), Expect = 2e-30
 Identities = 80/122 (65%), Positives = 80/122 (65%)
 Frame = -2

Query: 548 YNIQKESTLHLVLRLRGGTMIKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQR 369
           YNIQKESTLHLVLRLRGGTMIKVKTLTGK              IKERVEEKEGIPPVQQR
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 118

Query: 368 LIYAGKQLADDKTXXXXXXXXXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALR 189
           LIYAGKQLA                            DDKTAKEYNIEGGSVLHLVLALR
Sbjct: 119 LIYAGKQLA----------------------------DDKTAKEYNIEGGSVLHLVLALR 150

Query: 188 GG 183
           GG
Sbjct: 151 GG 152



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 43/102 (42%), Positives = 51/102 (50%)
 Frame = -2

Query: 488 IKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQRLIYAGKQLADDKTXXXXXXX 309
           I VKTLTGK              +K ++++KEGIPP QQRLI+AGKQL D +T       
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT------- 55

Query: 308 XXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALRGG 183
                          LAD      YNI+  S LHLVL LRGG
Sbjct: 56  ---------------LAD------YNIQKESTLHLVLRLRGG 76


>gb|AEO32977.1| hypothetical protein [Amblyomma maculatum]
          Length = 168

 Score =  136 bits (342), Expect = 2e-30
 Identities = 80/122 (65%), Positives = 80/122 (65%)
 Frame = -2

Query: 548 YNIQKESTLHLVLRLRGGTMIKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQR 369
           YNIQKESTLHLVLRLRGGTMIKVKTLTGK              IKERVEEKEGIPPVQQR
Sbjct: 74  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQR 133

Query: 368 LIYAGKQLADDKTXXXXXXXXXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALR 189
           LIYAGKQLA                            DDKTAKEYNIEGGSVLHLVLALR
Sbjct: 134 LIYAGKQLA----------------------------DDKTAKEYNIEGGSVLHLVLALR 165

Query: 188 GG 183
           GG
Sbjct: 166 GG 167



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/100 (42%), Positives = 50/100 (50%)
 Frame = -2

Query: 482 VKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQRLIYAGKQLADDKTXXXXXXXXX 303
           VKTLTGK              +K ++++KEGIPP QQRLI+AGKQL D +T         
Sbjct: 20  VKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT--------- 70

Query: 302 XXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALRGG 183
                        LAD      YNI+  S LHLVL LRGG
Sbjct: 71  -------------LAD------YNIQKESTLHLVLRLRGG 91


>sp|P0C073.2|RUB1_DESAN RecName: Full=Ubiquitin-NEDD8-like protein RUB1; Contains: RecName:
           Full=Ubiquitin; Contains: RecName: Full=NEDD8-like
           protein RUB1; AltName: Full=DaRUB1; AltName:
           Full=Ubiquitin-related protein 1; Flags: Precursor
           gi|20562909|gb|AAM22748.1| polyubiquitin 2 [Deschampsia
           antarctica]
          Length = 153

 Score =  135 bits (339), Expect = 5e-30
 Identities = 78/122 (63%), Positives = 80/122 (65%)
 Frame = -2

Query: 548 YNIQKESTLHLVLRLRGGTMIKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQR 369
           YNIQKESTLHLVLRLRGGTMIKVKTLTGK              +KERVEEKEGIPPVQQR
Sbjct: 59  YNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQR 118

Query: 368 LIYAGKQLADDKTXXXXXXXXXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALR 189
           LIYAGKQLA                            DDKTAK+YNIEGGSVLHLVLALR
Sbjct: 119 LIYAGKQLA----------------------------DDKTAKDYNIEGGSVLHLVLALR 150

Query: 188 GG 183
           GG
Sbjct: 151 GG 152



 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 43/102 (42%), Positives = 51/102 (50%)
 Frame = -2

Query: 488 IKVKTLTGKXXXXXXXXXXXXXXIKERVEEKEGIPPVQQRLIYAGKQLADDKTXXXXXXX 309
           I VKTLTGK              +K ++++KEGIPP QQRLI+AGKQL D +T       
Sbjct: 3   IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT------- 55

Query: 308 XXXXXXXXXXXXXXXLADDKTAKEYNIEGGSVLHLVLALRGG 183
                          LAD      YNI+  S LHLVL LRGG
Sbjct: 56  ---------------LAD------YNIQKESTLHLVLRLRGG 76