BLASTX nr result

ID: Coptis24_contig00014908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014908
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC73405.1| hypothetical protein OsI_07660 [Oryza sativa Indi...   114   2e-23
ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like ...   112   4e-23
ref|XP_002319324.1| predicted protein [Populus trichocarpa] gi|2...   111   8e-23
gb|EEE57195.1| hypothetical protein OsJ_07142 [Oryza sativa Japo...   111   8e-23
ref|NP_001047138.1| Os02g0557300 [Oryza sativa Japonica Group] g...   111   8e-23

>gb|EEC73405.1| hypothetical protein OsI_07660 [Oryza sativa Indica Group]
          Length = 176

 Score =  114 bits (284), Expect = 2e-23
 Identities = 63/142 (44%), Positives = 89/142 (62%), Gaps = 3/142 (2%)
 Frame = +3

Query: 72  EPRCSVCLADYQAEDRLQQIPVCGHTFHMDCIDHWLATHTTCPLCRLSLLPAAKSDSGPS 251
           E +CSVCLADYQ ++RLQ+IP CGHTFH+DCIDHWL+T+TTCPLCR+SLLP+ K+ S   
Sbjct: 39  ETQCSVCLADYQPDERLQRIPPCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTAS--- 95

Query: 252 HNVQEIQAVVMRNEVISEGS--NVEDRRSRSPQSTGR-TRVFEQGSCRVRNEEFFCDVWR 422
                I  V +  + + E S  +V+ +  R  ++T +  +  +QGS   R++        
Sbjct: 96  -----IDPVDLEAQTVEENSSLDVQYQEGRIDENTRQEDQTLQQGSEGPRHQ-------- 142

Query: 423 ADEHIEQSEEGTVVPDIEAHGS 488
           A+E+ E S   T  P +EA GS
Sbjct: 143 AEENEETSVRVTTEPQVEAEGS 164


>ref|XP_002266319.2| PREDICTED: RING-H2 finger protein ATL7-like [Vitis vinifera]
           gi|297734760|emb|CBI16994.3| unnamed protein product
           [Vitis vinifera]
          Length = 221

 Score =  112 bits (281), Expect = 4e-23
 Identities = 48/59 (81%), Positives = 53/59 (89%)
 Frame = +3

Query: 72  EPRCSVCLADYQAEDRLQQIPVCGHTFHMDCIDHWLATHTTCPLCRLSLLPAAKSDSGP 248
           + +CSVCLADYQAEDRLQQIP CGHTFHMDCIDHWLATHTTCPLCRLSL  AA++ + P
Sbjct: 97  DTQCSVCLADYQAEDRLQQIPACGHTFHMDCIDHWLATHTTCPLCRLSLTAAARTPAEP 155


>ref|XP_002319324.1| predicted protein [Populus trichocarpa] gi|222857700|gb|EEE95247.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  111 bits (278), Expect = 8e-23
 Identities = 52/91 (57%), Positives = 60/91 (65%)
 Frame = +3

Query: 72  EPRCSVCLADYQAEDRLQQIPVCGHTFHMDCIDHWLATHTTCPLCRLSLLPAAKSDSGPS 251
           + +C VCL DYQAED+LQQIP CGHTFHMDCIDHWLA H TCPLCRLSLLP+ K+ S P 
Sbjct: 24  DTQCPVCLGDYQAEDKLQQIPACGHTFHMDCIDHWLANHITCPLCRLSLLPSVKAPSEPP 83

Query: 252 HNVQEIQAVVMRNEVISEGSNVEDRRSRSPQ 344
            N         + E + E S  E+    S Q
Sbjct: 84  RN---------QVETVQESSAAENGEEASVQ 105


>gb|EEE57195.1| hypothetical protein OsJ_07142 [Oryza sativa Japonica Group]
          Length = 176

 Score =  111 bits (278), Expect = 8e-23
 Identities = 62/142 (43%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
 Frame = +3

Query: 72  EPRCSVCLADYQAEDRLQQIPVCGHTFHMDCIDHWLATHTTCPLCRLSLLPAAKSDSGPS 251
           E +CSVCLADYQ ++RLQ+IP CGHTFH+DCIDHWL+T+TTCPLCR+SLLP+ K+ S   
Sbjct: 39  ETQCSVCLADYQPDERLQRIPPCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTAS--- 95

Query: 252 HNVQEIQAVVMRNEVISEGS--NVEDRRSRSPQSTGR-TRVFEQGSCRVRNEEFFCDVWR 422
                I  V +  + + E S  +V+ +  R  ++T +  +  +QGS    ++        
Sbjct: 96  -----IDPVDLEAQTVEENSSLDVQYQEGRIDENTRQEDQTLQQGSEGPTHQ-------- 142

Query: 423 ADEHIEQSEEGTVVPDIEAHGS 488
           A+E+ E S   T  P +EA GS
Sbjct: 143 AEENEETSVRVTTEPQVEAEGS 164


>ref|NP_001047138.1| Os02g0557300 [Oryza sativa Japonica Group]
           gi|113536669|dbj|BAF09052.1| Os02g0557300 [Oryza sativa
           Japonica Group] gi|215695052|dbj|BAG90243.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 233

 Score =  111 bits (278), Expect = 8e-23
 Identities = 62/142 (43%), Positives = 88/142 (61%), Gaps = 3/142 (2%)
 Frame = +3

Query: 72  EPRCSVCLADYQAEDRLQQIPVCGHTFHMDCIDHWLATHTTCPLCRLSLLPAAKSDSGPS 251
           E +CSVCLADYQ ++RLQ+IP CGHTFH+DCIDHWL+T+TTCPLCR+SLLP+ K+ S   
Sbjct: 96  ETQCSVCLADYQPDERLQRIPPCGHTFHIDCIDHWLSTNTTCPLCRVSLLPSPKTAS--- 152

Query: 252 HNVQEIQAVVMRNEVISEGS--NVEDRRSRSPQSTGR-TRVFEQGSCRVRNEEFFCDVWR 422
                I  V +  + + E S  +V+ +  R  ++T +  +  +QGS    ++        
Sbjct: 153 -----IDPVDLEAQTVEENSSLDVQYQEGRIDENTRQEDQTLQQGSEGPTHQ-------- 199

Query: 423 ADEHIEQSEEGTVVPDIEAHGS 488
           A+E+ E S   T  P +EA GS
Sbjct: 200 AEENEETSVRVTTEPQVEAEGS 221


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