BLASTX nr result

ID: Coptis24_contig00014905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014905
         (1432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300824.1| homocysteine s-methyltransferase [Populus tr...   520   e-145
ref|XP_002307602.1| homocysteine s-methyltransferase [Populus tr...   516   e-144
ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyl...   511   e-142
ref|XP_003632324.1| PREDICTED: homocysteine S-methyltransferase ...   496   e-138
ref|XP_002517092.1| 5-methyltetrahydrofolate:homocysteine methyl...   492   e-136

>ref|XP_002300824.1| homocysteine s-methyltransferase [Populus trichocarpa]
            gi|222842550|gb|EEE80097.1| homocysteine
            s-methyltransferase [Populus trichocarpa]
          Length = 332

 Score =  520 bits (1340), Expect = e-145
 Identities = 249/330 (75%), Positives = 291/330 (88%)
 Frame = -2

Query: 1326 MSNFLQQSGGYALIDGGLATELERHGADLNDPLWSAKCLISSPHLIKTVHLDYLEAGADI 1147
            M++FL+QSGG A+IDGGLATELERHGADLNDPLWSAKCL++SPHL++ VHLDYLEAGADI
Sbjct: 1    MTDFLRQSGGVAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLVRAVHLDYLEAGADI 60

Query: 1146 ILTASYQATIQGFESKGMSKEDSEALLQRSVKIACEARDTYYERCAEHLSDGTKNGRILK 967
            I+TASYQATIQGFE+KG S+EDSEALL++SV+IACEARD YY RC E   DG+ +GR+LK
Sbjct: 61   IITASYQATIQGFEAKGFSREDSEALLRKSVEIACEARDIYYGRCREGSPDGSDDGRVLK 120

Query: 966  HRPILVAASVGSYGAYLADGSEYDGNYGDAVTLSTLKEFHRRRVQVLAESGPDLIAFETI 787
            HRPILVAASVGSYGAYLADGSEY GNYGDA+TL TLK+FHRRRVQ+LAESG DLIAFET+
Sbjct: 121  HRPILVAASVGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILAESGADLIAFETV 180

Query: 786  PNKXXXXXXXXXXXEDGINIPAWFAFNSKDGVNVVSGDSLSECASIADSSEKVIAVGINC 607
            PNK           E+ I IPAWF+FNSKDG+NVVSGDSL ECASIA+S +  +AVGINC
Sbjct: 181  PNKVEAQAYAELLEEEDIKIPAWFSFNSKDGINVVSGDSLLECASIAESCKNAVAVGINC 240

Query: 606  TPPRFIRGLVLSIQKVTSKPILIYPNSGETYDPDQKQWVQSTGVSDEDFVSYVNKWRECG 427
            TPPRFI  L+LSI+KVT+KPILIYPNSGE+YD D+K+WVQ+TG+SD+DFVSYVNKW E G
Sbjct: 241  TPPRFIHELILSIKKVTTKPILIYPNSGESYDGDRKEWVQNTGISDQDFVSYVNKWCEIG 300

Query: 426  ASLIGGCCRTTPNTIRAIYKALKSPAASPS 337
            A+L+GGCCRTTP+TIRAIYK L + +A+ S
Sbjct: 301  AALVGGCCRTTPHTIRAIYKTLPNRSAALS 330


>ref|XP_002307602.1| homocysteine s-methyltransferase [Populus trichocarpa]
            gi|222857051|gb|EEE94598.1| homocysteine
            s-methyltransferase [Populus trichocarpa]
          Length = 341

 Score =  516 bits (1328), Expect = e-144
 Identities = 248/332 (74%), Positives = 291/332 (87%)
 Frame = -2

Query: 1332 SSMSNFLQQSGGYALIDGGLATELERHGADLNDPLWSAKCLISSPHLIKTVHLDYLEAGA 1153
            S M++FL+QSGG A+IDGGLATELERHGADLNDPLWSAKCL++SPHL++ VHLDYLEAGA
Sbjct: 10   SFMTDFLRQSGGVAIIDGGLATELERHGADLNDPLWSAKCLLTSPHLVREVHLDYLEAGA 69

Query: 1152 DIILTASYQATIQGFESKGMSKEDSEALLQRSVKIACEARDTYYERCAEHLSDGTKNGRI 973
            DII+TASYQATIQGFE+KG S E+SE+LL++SVKIACEARD YY+RC +   D + NGR+
Sbjct: 70   DIIITASYQATIQGFEAKGFSGEESESLLRKSVKIACEARDIYYDRCQKGSPD-SNNGRV 128

Query: 972  LKHRPILVAASVGSYGAYLADGSEYDGNYGDAVTLSTLKEFHRRRVQVLAESGPDLIAFE 793
            LK RPILVAAS+GSYGAYLADGSEY GNYGDA+TL TLK+FHRRRVQ+LAESG DLIAFE
Sbjct: 129  LKQRPILVAASIGSYGAYLADGSEYSGNYGDAITLETLKDFHRRRVQILAESGADLIAFE 188

Query: 792  TIPNKXXXXXXXXXXXEDGINIPAWFAFNSKDGVNVVSGDSLSECASIADSSEKVIAVGI 613
            T+PNK           E+ I IPAWF+FNSKDGVNVVSGDSL +CASIA+S + V+AVGI
Sbjct: 189  TVPNKVEAQAYVELLKEEDIKIPAWFSFNSKDGVNVVSGDSLLDCASIAESCQNVVAVGI 248

Query: 612  NCTPPRFIRGLVLSIQKVTSKPILIYPNSGETYDPDQKQWVQSTGVSDEDFVSYVNKWRE 433
            NCTPPRFI GL+LSI+KVT+KPILIYPNSGE+YD  +K+WVQ+TG+SD+DFVSYVNKW E
Sbjct: 249  NCTPPRFIHGLILSIKKVTTKPILIYPNSGESYDGKRKEWVQNTGISDQDFVSYVNKWCE 308

Query: 432  CGASLIGGCCRTTPNTIRAIYKALKSPAASPS 337
             GA+L+GGCCRTTPNTIRAIY+ L S + +PS
Sbjct: 309  IGAALVGGCCRTTPNTIRAIYRTLSSRSPAPS 340


>ref|XP_002524742.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
            [Ricinus communis] gi|223535926|gb|EEF37585.1|
            5-methyltetrahydrofolate:homocysteine methyltransferase,
            putative [Ricinus communis]
          Length = 343

 Score =  511 bits (1315), Expect = e-142
 Identities = 246/329 (74%), Positives = 286/329 (86%)
 Frame = -2

Query: 1341 NPLSSMSNFLQQSGGYALIDGGLATELERHGADLNDPLWSAKCLISSPHLIKTVHLDYLE 1162
            NP S M++FL+QSGG A+IDGGLATELERHGADLNDPLWSAKCL++SPHLI+ VHLDYLE
Sbjct: 8    NPSSLMTDFLKQSGGVAVIDGGLATELERHGADLNDPLWSAKCLLTSPHLIRMVHLDYLE 67

Query: 1161 AGADIILTASYQATIQGFESKGMSKEDSEALLQRSVKIACEARDTYYERCAEHLSDGTKN 982
            AGADII+TASYQATIQGFE+KG S  +SEALL++SV+IACEAR+ Y+++C     D   +
Sbjct: 68   AGADIIITASYQATIQGFEAKGFSSAESEALLKKSVEIACEAREVYHDKCLAGACDDNND 127

Query: 981  GRILKHRPILVAASVGSYGAYLADGSEYDGNYGDAVTLSTLKEFHRRRVQVLAESGPDLI 802
            GR+LK RPILVAASVGSYGAYLADGSEY G+YG+AVTL TLK+FHRRRVQVLAE+G DLI
Sbjct: 128  GRVLKKRPILVAASVGSYGAYLADGSEYSGDYGEAVTLGTLKDFHRRRVQVLAEAGADLI 187

Query: 801  AFETIPNKXXXXXXXXXXXEDGINIPAWFAFNSKDGVNVVSGDSLSECASIADSSEKVIA 622
            AFET+PN+           E+ I +PAWF+FNSKDG+NVVSGDSL ECASIA+S  KVIA
Sbjct: 188  AFETVPNRVEAQAYAELLEEEDIKVPAWFSFNSKDGINVVSGDSLLECASIAESCRKVIA 247

Query: 621  VGINCTPPRFIRGLVLSIQKVTSKPILIYPNSGETYDPDQKQWVQSTGVSDEDFVSYVNK 442
            VGINCTPP FI GL+LSI+KVTSKPILIYPNSGE+YD D+K+WVQ+TGV+DEDFVSYVNK
Sbjct: 248  VGINCTPPSFIHGLILSIKKVTSKPILIYPNSGESYDADRKEWVQNTGVTDEDFVSYVNK 307

Query: 441  WRECGASLIGGCCRTTPNTIRAIYKALKS 355
            W E GASL+GGCCRTTPNTIRAIY+ L +
Sbjct: 308  WCEVGASLVGGCCRTTPNTIRAIYRTLSN 336


>ref|XP_003632324.1| PREDICTED: homocysteine S-methyltransferase 2-like [Vitis vinifera]
          Length = 335

 Score =  496 bits (1277), Expect = e-138
 Identities = 243/330 (73%), Positives = 282/330 (85%)
 Frame = -2

Query: 1344 VNPLSSMSNFLQQSGGYALIDGGLATELERHGADLNDPLWSAKCLISSPHLIKTVHLDYL 1165
            + P S +S+FL Q+GG A+IDGGLATELERHGADLNDPLWSAKCL+SSPHLI+TVHLDYL
Sbjct: 6    LQPSSFISDFLLQTGGVAVIDGGLATELERHGADLNDPLWSAKCLLSSPHLIRTVHLDYL 65

Query: 1164 EAGADIILTASYQATIQGFESKGMSKEDSEALLQRSVKIACEARDTYYERCAEHLSDGTK 985
            EAGADII+TASYQATIQGFE++G S+ +SEALL++SV+IACEAR  YY+R          
Sbjct: 66   EAGADIIITASYQATIQGFEARGFSRGESEALLRKSVEIACEARKMYYDRY--------- 116

Query: 984  NGRILKHRPILVAASVGSYGAYLADGSEYDGNYGDAVTLSTLKEFHRRRVQVLAESGPDL 805
             GRILKHRPILVAASVGSYGAYLADGSEY G YGD +T+ TLK+FHRRRVQ+LA++G DL
Sbjct: 117  -GRILKHRPILVAASVGSYGAYLADGSEYSGIYGDEITVETLKDFHRRRVQILADAGADL 175

Query: 804  IAFETIPNKXXXXXXXXXXXEDGINIPAWFAFNSKDGVNVVSGDSLSECASIADSSEKVI 625
            IAFET+PNK           E+ I IPAWF+FNSKDGV+VVSGDSL EC SIA+S +KV+
Sbjct: 176  IAFETVPNKLEAQAYAELLEEENIKIPAWFSFNSKDGVHVVSGDSLLECVSIAESCKKVV 235

Query: 624  AVGINCTPPRFIRGLVLSIQKVTSKPILIYPNSGETYDPDQKQWVQSTGVSDEDFVSYVN 445
            +VGINCTPPRFI GL+LSI+KVT+KPILIYPNSGE+YDP+QK+WVQ TGVS EDFVSYVN
Sbjct: 236  SVGINCTPPRFIHGLILSIKKVTTKPILIYPNSGESYDPEQKEWVQKTGVSVEDFVSYVN 295

Query: 444  KWRECGASLIGGCCRTTPNTIRAIYKALKS 355
            KW E GASL+GGCCRTTPNTIRAIY+ L +
Sbjct: 296  KWCEVGASLVGGCCRTTPNTIRAIYRTLSN 325


>ref|XP_002517092.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
            [Ricinus communis] gi|223543727|gb|EEF45255.1|
            5-methyltetrahydrofolate:homocysteine methyltransferase,
            putative [Ricinus communis]
          Length = 348

 Score =  492 bits (1266), Expect = e-136
 Identities = 235/331 (70%), Positives = 285/331 (86%)
 Frame = -2

Query: 1332 SSMSNFLQQSGGYALIDGGLATELERHGADLNDPLWSAKCLISSPHLIKTVHLDYLEAGA 1153
            S MS+FLQ+ GGYA+IDGG ATELERHGADLNDPLWSAKCLISSPHL++ VHLDY++AGA
Sbjct: 11   SFMSDFLQKCGGYAVIDGGFATELERHGADLNDPLWSAKCLISSPHLVRRVHLDYIDAGA 70

Query: 1152 DIILTASYQATIQGFESKGMSKEDSEALLQRSVKIACEARDTYYERCAEHLSDGTKNGRI 973
            +IILTASYQATIQGFE+KG+S E++E LL+RSV+IACEAR+ YY+ C +   D  ++G++
Sbjct: 71   NIILTASYQATIQGFEAKGLSTEEAEQLLRRSVEIACEAREIYYDNCTKGSWDLMEDGKM 130

Query: 972  LKHRPILVAASVGSYGAYLADGSEYDGNYGDAVTLSTLKEFHRRRVQVLAESGPDLIAFE 793
             +H P+LVAAS+GSYGAYLADGSEY G+YGDAV++ TLK+FHRRR+Q+LA+SG DLIAFE
Sbjct: 131  SRH-PVLVAASIGSYGAYLADGSEYSGDYGDAVSIQTLKDFHRRRLQILAKSGADLIAFE 189

Query: 792  TIPNKXXXXXXXXXXXEDGINIPAWFAFNSKDGVNVVSGDSLSECASIADSSEKVIAVGI 613
            TIPNK           E+GINIPAWF+FNSKDG+NVVSGDS+ ECASIADSS++V+AVGI
Sbjct: 190  TIPNKLEAKAYAELLEEEGINIPAWFSFNSKDGINVVSGDSILECASIADSSKQVVAVGI 249

Query: 612  NCTPPRFIRGLVLSIQKVTSKPILIYPNSGETYDPDQKQWVQSTGVSDEDFVSYVNKWRE 433
            NCTPPRFI GL+LS+++ TSKPI+IYPNSGETYD   KQWV+S G SDEDFVSY+ KWRE
Sbjct: 250  NCTPPRFIHGLILSMREATSKPIVIYPNSGETYDAALKQWVKSCGASDEDFVSYIGKWRE 309

Query: 432  CGASLIGGCCRTTPNTIRAIYKALKSPAASP 340
             GASL GGCCRTTPNTIRAI + + + ++ P
Sbjct: 310  AGASLFGGCCRTTPNTIRAICRNISNKSSPP 340


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