BLASTX nr result

ID: Coptis24_contig00014902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014902
         (799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270945.2| PREDICTED: trihelix transcription factor GT-...   360   2e-97
ref|XP_002514968.1| transcription factor, putative [Ricinus comm...   353   2e-95
emb|CAN73236.1| hypothetical protein VITISV_030092 [Vitis vinifera]   350   2e-94
ref|XP_002312646.1| predicted protein [Populus trichocarpa] gi|2...   349   4e-94
ref|XP_002266062.1| PREDICTED: trihelix transcription factor GT-...   345   9e-93

>ref|XP_002270945.2| PREDICTED: trihelix transcription factor GT-1 [Vitis vinifera]
          Length = 348

 Score =  360 bits (924), Expect = 2e-97
 Identities = 176/261 (67%), Positives = 204/261 (78%)
 Frame = +1

Query: 1   HLWEQISCKMRDKGFDRSPTMCTDKWRNLLKEFKKARQQVRGSGSAAKMSYYKXXXXXXX 180
           HLWEQIS KMR+KGFDRSPTMCTDKWRNLLKEFKKA+ Q RGSGSA KMSYYK       
Sbjct: 66  HLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSA-KMSYYKEIEEILK 124

Query: 181 XXSKNAPYKSSTTAAAGSTKVDAYVQFDNSKGSEDSTIPFGPVEAVGRPTINLERRIHND 360
             SKNA YKS T +     KVD ++QF + KG +D++IPFGPVEA GRPT+NLER++ +D
Sbjct: 125 ERSKNAHYKSPTMS-----KVDPFIQFSD-KGIDDTSIPFGPVEASGRPTLNLERQLDHD 178

Query: 361 GHSLXXXXXXXXXXXXLSPWNWRSTSGNGGERHSYGGRVITVKWGDFTRRIGIDGTADAI 540
           GH L            + PWNWR T G+GGE  SYGGRVI+VKWGD+TRRIGIDGTADAI
Sbjct: 179 GHPLAITSADAVTANGVPPWNWRETPGSGGESQSYGGRVISVKWGDYTRRIGIDGTADAI 238

Query: 541 KEAIKSAFGLRTRRAFWLEDEDEVVRSLDRDMPLGPYMLHLDEGMTIKVCIFDDSDRMPF 720
           KEAIKSAF LRT+R FWLEDED+++R+LDRDMPLG Y LHLDEG+ IKVC +D+S+ +P 
Sbjct: 239 KEAIKSAFRLRTKRGFWLEDEDQIIRTLDRDMPLGSYSLHLDEGIGIKVCHYDESEHIPV 298

Query: 721 QTEEKTLYTEDDFRDFLAHRG 783
            TEEKT YTE+DFRDFL  RG
Sbjct: 299 HTEEKTFYTEEDFRDFLTRRG 319


>ref|XP_002514968.1| transcription factor, putative [Ricinus communis]
           gi|223546019|gb|EEF47522.1| transcription factor,
           putative [Ricinus communis]
          Length = 398

 Score =  353 bits (906), Expect = 2e-95
 Identities = 172/261 (65%), Positives = 204/261 (78%)
 Frame = +1

Query: 1   HLWEQISCKMRDKGFDRSPTMCTDKWRNLLKEFKKARQQVRGSGSAAKMSYYKXXXXXXX 180
           HLWE IS KMR+KGFDRSPTMCTDKWRNLLKEFKKAR Q RGSGSA KMSYYK       
Sbjct: 115 HLWESISSKMREKGFDRSPTMCTDKWRNLLKEFKKARHQERGSGSA-KMSYYKEIDEILR 173

Query: 181 XXSKNAPYKSSTTAAAGSTKVDAYVQFDNSKGSEDSTIPFGPVEAVGRPTINLERRIHND 360
             SKNA YKS T     ++KVD+++QF + KG +D++I FGPVEA GRPT+NLERR+ +D
Sbjct: 174 ERSKNAQYKSPTP----TSKVDSFMQFAD-KGFDDTSISFGPVEASGRPTLNLERRLDHD 228

Query: 361 GHSLXXXXXXXXXXXXLSPWNWRSTSGNGGERHSYGGRVITVKWGDFTRRIGIDGTADAI 540
           GH L            + PWNWR T G+G E  S+GGRVITVK+GD+TRRIGIDGTADAI
Sbjct: 229 GHPLAITAADAVAASGVPPWNWRETPGSGAEGQSFGGRVITVKYGDYTRRIGIDGTADAI 288

Query: 541 KEAIKSAFGLRTRRAFWLEDEDEVVRSLDRDMPLGPYMLHLDEGMTIKVCIFDDSDRMPF 720
           +EA+KSAF LRT+RAFWLEDED+++RSLDRDMP+G Y LHLDEG+ IKVC++D+SD +P 
Sbjct: 289 REAVKSAFRLRTKRAFWLEDEDQIIRSLDRDMPVGNYTLHLDEGLAIKVCLYDESDHIPV 348

Query: 721 QTEEKTLYTEDDFRDFLAHRG 783
            TEEK  YTEDD+R+FL  RG
Sbjct: 349 HTEEKVFYTEDDYREFLVRRG 369


>emb|CAN73236.1| hypothetical protein VITISV_030092 [Vitis vinifera]
          Length = 384

 Score =  350 bits (899), Expect = 2e-94
 Identities = 176/275 (64%), Positives = 204/275 (74%), Gaps = 14/275 (5%)
 Frame = +1

Query: 1   HLWEQISCKMRDKGFDRSPTMCTDKWRNLLKEFKKARQQVRGSGSAAKMSYYKXXXXXXX 180
           HLWEQIS KMR+KGFDRSPTMCTDKWRNLLKEFKKA+ Q RGSGSA KMSYYK       
Sbjct: 88  HLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSA-KMSYYKEIEEILK 146

Query: 181 XXSKNAPYKSSTTAAAGSTKVDAYVQFDNSKGSEDSTIPFGPVEAVGRPTINLERRIHND 360
             SKNA YKS T +     KVD ++QF + KG +D++IPFGPVEA GRPT+NLER++ +D
Sbjct: 147 ERSKNAHYKSPTMS-----KVDPFIQFSD-KGIDDTSIPFGPVEASGRPTLNLERQLDHD 200

Query: 361 GHSLXXXXXXXXXXXXLSPWNWRSTSGNGGERHSYGGRVITVKWGDFTRRIGIDGTADAI 540
           GH L            + PWNWR T G+GGE  SYGGRVI+VKWGD+TRRIGIDGTADAI
Sbjct: 201 GHPLAITSADAVTANGVPPWNWRETPGSGGESQSYGGRVISVKWGDYTRRIGIDGTADAI 260

Query: 541 KEAIKSAFGLRTRRAFWLEDEDEVVRSLDRDMPLGPYMLHLDE--------------GMT 678
           KEAIKSAF LRT+R FWLEDED+++R+LDRDMPLG Y LHLDE              G+ 
Sbjct: 261 KEAIKSAFRLRTKRGFWLEDEDQIIRTLDRDMPLGSYSLHLDEVMSEVLNVRALLFSGIG 320

Query: 679 IKVCIFDDSDRMPFQTEEKTLYTEDDFRDFLAHRG 783
           IKVC +D+S+ +P  TEEKT YTE+DFRDFL  RG
Sbjct: 321 IKVCHYDESEHIPVHTEEKTFYTEEDFRDFLTRRG 355


>ref|XP_002312646.1| predicted protein [Populus trichocarpa] gi|222852466|gb|EEE90013.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score =  349 bits (896), Expect = 4e-94
 Identities = 172/261 (65%), Positives = 199/261 (76%)
 Frame = +1

Query: 1   HLWEQISCKMRDKGFDRSPTMCTDKWRNLLKEFKKARQQVRGSGSAAKMSYYKXXXXXXX 180
           HLWEQIS KMRDKGFDRSPTMCTDKWRNLLKEFKKA+ Q RGSGSA KMSYYK       
Sbjct: 104 HLWEQISTKMRDKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSA-KMSYYKEIDEILR 162

Query: 181 XXSKNAPYKSSTTAAAGSTKVDAYVQFDNSKGSEDSTIPFGPVEAVGRPTINLERRIHND 360
             +KN+ YK  T       KVD+Y+QF + KG ED++I FGPVEA  RPT+NLERR+ +D
Sbjct: 163 GRNKNSQYKCPTP------KVDSYMQFSD-KGFEDTSISFGPVEASARPTLNLERRLDHD 215

Query: 361 GHSLXXXXXXXXXXXXLSPWNWRSTSGNGGERHSYGGRVITVKWGDFTRRIGIDGTADAI 540
           GH L            + PWNWR T GNG E  S+GGRVI+VK GD+TRRIGIDGT DAI
Sbjct: 216 GHPLAITAADAVAASGVPPWNWRETPGNGAESQSFGGRVISVKSGDYTRRIGIDGTTDAI 275

Query: 541 KEAIKSAFGLRTRRAFWLEDEDEVVRSLDRDMPLGPYMLHLDEGMTIKVCIFDDSDRMPF 720
           +EAIKSAF LRT+RAFWLEDED+++R+LDRDMPLG Y LHLDEG+ IKVC++D SD +P 
Sbjct: 276 REAIKSAFRLRTKRAFWLEDEDQIIRALDRDMPLGNYTLHLDEGLAIKVCLYDQSDHIPM 335

Query: 721 QTEEKTLYTEDDFRDFLAHRG 783
            TEEK  YTEDD+RDFL+ RG
Sbjct: 336 HTEEKIFYTEDDYRDFLSRRG 356


>ref|XP_002266062.1| PREDICTED: trihelix transcription factor GT-1 isoform 1 [Vitis
           vinifera]
          Length = 378

 Score =  345 bits (884), Expect = 9e-93
 Identities = 175/263 (66%), Positives = 199/263 (75%), Gaps = 2/263 (0%)
 Frame = +1

Query: 1   HLWEQISCKMRDKGFDRSPTMCTDKWRNLLKEFKKARQQVRGSGS-AAKMSYYKXXXXXX 177
           HLWEQIS KMR+KGFDRSPTMCTDKWRNLLKEFKKA+ Q R S S +AKM+YYK      
Sbjct: 89  HLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRSSSSGSAKMAYYKELEELL 148

Query: 178 XXXSKNAPYKSSTTAAAGSTKVDAYVQFDNSKGSEDSTIPFGPVEAVGRPTINLERRIHN 357
              SKN  YKS T +     KVD+Y+QF + KG ED+ IPFG VEA GR T+NLER + +
Sbjct: 149 RDRSKNGSYKSPTPS-----KVDSYIQFSD-KGLEDAGIPFGSVEASGRSTVNLERPLDH 202

Query: 358 DGHSLXXXXXXXXXXXXLSPWNWRSTSGNGGERHS-YGGRVITVKWGDFTRRIGIDGTAD 534
           DG  L            + PWNWR T GNGGE HS YGGRVI+VKWG++TRRIGIDG   
Sbjct: 203 DGDPLAITAADAVAASGVPPWNWRETPGNGGEGHSSYGGRVISVKWGEYTRRIGIDGNLG 262

Query: 535 AIKEAIKSAFGLRTRRAFWLEDEDEVVRSLDRDMPLGPYMLHLDEGMTIKVCIFDDSDRM 714
           AIK+AIKSAF LRT+RAFWLEDED VVR LDRDMPLG Y LHLDEG+TIKVC++DD DR+
Sbjct: 263 AIKDAIKSAFNLRTKRAFWLEDEDGVVRCLDRDMPLGNYTLHLDEGVTIKVCLYDDPDRI 322

Query: 715 PFQTEEKTLYTEDDFRDFLAHRG 783
             +TEEKTLYTE+DFRDFLA RG
Sbjct: 323 TVRTEEKTLYTEEDFRDFLARRG 345


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