BLASTX nr result

ID: Coptis24_contig00014892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014892
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] g...    55   8e-06

>ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata]
            gi|297338984|gb|EFH69401.1| EMB1507 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 2171

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/67 (47%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +1

Query: 1    LIHAAATILNENNLVWYDQKSGNLHATEHGHSVAACIPVERYI-TYHEHLKLEIGGCKQH 177
            LIH+AATIL++NNLV YD+KSG    T+ G   +        I TY+EHLK  +G    +
Sbjct: 980  LIHSAATILDKNNLVKYDRKSGYFQVTDLGRIASYYYITHGTIATYNEHLKPTMGDIDLY 1039

Query: 178  RLISLGE 198
            RL SL E
Sbjct: 1040 RLFSLSE 1046


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