BLASTX nr result
ID: Coptis24_contig00014860
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014860 (555 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004145907.1| PREDICTED: trafficking protein particle comp... 164 2e-57 gb|ACJ84157.1| unknown [Medicago truncatula] gi|388493118|gb|AFK... 164 1e-56 ref|XP_002513631.1| protein with unknown function [Ricinus commu... 166 2e-56 ref|XP_002327510.1| predicted protein [Populus trichocarpa] gi|2... 162 2e-56 ref|NP_001240237.1| uncharacterized protein LOC100819825 [Glycin... 164 3e-56 >ref|XP_004145907.1| PREDICTED: trafficking protein particle complex subunit 1-like [Cucumis sativus] Length = 169 Score = 164 bits (414), Expect(2) = 2e-57 Identities = 75/87 (86%), Positives = 82/87 (94%) Frame = +3 Query: 240 GVPQLPGQGCSFHSFKTNTYKLTFMESPSGIKIILVTNPRIADLRDSLKYIYNLYVEYVV 419 GVPQLPGQGCSFHSF+TNTYKL+F E+PSGIKIILVT+PR DLRD LKYIYNLYVEYVV Sbjct: 82 GVPQLPGQGCSFHSFRTNTYKLSFTETPSGIKIILVTHPRTGDLRDPLKYIYNLYVEYVV 141 Query: 420 KNPLYSPGTPIRCELFNTSLDQYVKNL 500 KNP+YSPGTPIRCELFNTSLDQYV+ + Sbjct: 142 KNPIYSPGTPIRCELFNTSLDQYVRTI 168 Score = 84.0 bits (206), Expect(2) = 2e-57 Identities = 38/41 (92%), Positives = 39/41 (95%) Frame = +1 Query: 1 FNRNGVCLLYREWNRPLRTLSSQQDHKLMFGLLFSLKSFTA 123 FNRNGVCL YREWNRPLRTL+ QQDHKLMFGLLFSLKSFTA Sbjct: 29 FNRNGVCLFYREWNRPLRTLNPQQDHKLMFGLLFSLKSFTA 69 >gb|ACJ84157.1| unknown [Medicago truncatula] gi|388493118|gb|AFK34625.1| unknown [Medicago truncatula] gi|388514053|gb|AFK45088.1| unknown [Medicago truncatula] Length = 169 Score = 164 bits (414), Expect(2) = 1e-56 Identities = 76/88 (86%), Positives = 84/88 (95%) Frame = +3 Query: 240 GVPQLPGQGCSFHSFKTNTYKLTFMESPSGIKIILVTNPRIADLRDSLKYIYNLYVEYVV 419 GVPQLPGQGCSFHSF+TNTYKL+FMESPSGIKIILVT+PR DLRDSLKYIYNLYVEYVV Sbjct: 82 GVPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHPRTGDLRDSLKYIYNLYVEYVV 141 Query: 420 KNPLYSPGTPIRCELFNTSLDQYVKNLA 503 KNPLY+PG+PIR ELFNT+LDQYV+ +A Sbjct: 142 KNPLYTPGSPIRSELFNTTLDQYVRGIA 169 Score = 81.6 bits (200), Expect(2) = 1e-56 Identities = 36/41 (87%), Positives = 39/41 (95%) Frame = +1 Query: 1 FNRNGVCLLYREWNRPLRTLSSQQDHKLMFGLLFSLKSFTA 123 FNRNG+CLLYREWNRPL TL++QQDHKLMFGLLFSLKS TA Sbjct: 29 FNRNGICLLYREWNRPLHTLNAQQDHKLMFGLLFSLKSLTA 69 >ref|XP_002513631.1| protein with unknown function [Ricinus communis] gi|223547539|gb|EEF49034.1| protein with unknown function [Ricinus communis] Length = 169 Score = 166 bits (419), Expect(2) = 2e-56 Identities = 75/88 (85%), Positives = 85/88 (96%) Frame = +3 Query: 240 GVPQLPGQGCSFHSFKTNTYKLTFMESPSGIKIILVTNPRIADLRDSLKYIYNLYVEYVV 419 G+PQ PGQGCSFHSF+TNTYKL+FMESPSGIKIILVT+PR DLR+SLKYIYNLYVEYVV Sbjct: 82 GMPQFPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHPRTGDLRESLKYIYNLYVEYVV 141 Query: 420 KNPLYSPGTPIRCELFNTSLDQYVKNLA 503 KNPLY+PGTPIRCELFNTSLDQY++++A Sbjct: 142 KNPLYTPGTPIRCELFNTSLDQYIRSVA 169 Score = 79.0 bits (193), Expect(2) = 2e-56 Identities = 36/41 (87%), Positives = 38/41 (92%) Frame = +1 Query: 1 FNRNGVCLLYREWNRPLRTLSSQQDHKLMFGLLFSLKSFTA 123 FNRNGVCLLYREWNR L TL++QQDHKLMFGLLFSLKS TA Sbjct: 29 FNRNGVCLLYREWNRSLHTLNAQQDHKLMFGLLFSLKSLTA 69 >ref|XP_002327510.1| predicted protein [Populus trichocarpa] gi|222836064|gb|EEE74485.1| predicted protein [Populus trichocarpa] Length = 169 Score = 162 bits (411), Expect(2) = 2e-56 Identities = 72/88 (81%), Positives = 85/88 (96%) Frame = +3 Query: 240 GVPQLPGQGCSFHSFKTNTYKLTFMESPSGIKIILVTNPRIADLRDSLKYIYNLYVEYVV 419 GVPQLPGQGCSFHSF+TNTYKL+FME+PSGIKIIL+T+P+ DLR+SLKYIYNLYVEYVV Sbjct: 82 GVPQLPGQGCSFHSFRTNTYKLSFMETPSGIKIILITHPKTGDLRESLKYIYNLYVEYVV 141 Query: 420 KNPLYSPGTPIRCELFNTSLDQYVKNLA 503 KNP+Y+PG PIRCELFNTSLDQYV++++ Sbjct: 142 KNPIYTPGAPIRCELFNTSLDQYVRSIS 169 Score = 82.0 bits (201), Expect(2) = 2e-56 Identities = 37/41 (90%), Positives = 39/41 (95%) Frame = +1 Query: 1 FNRNGVCLLYREWNRPLRTLSSQQDHKLMFGLLFSLKSFTA 123 FNRNGVCLLYREWNRPL TL++QQDHKLMFGLLFSLKS TA Sbjct: 29 FNRNGVCLLYREWNRPLHTLNAQQDHKLMFGLLFSLKSLTA 69 >ref|NP_001240237.1| uncharacterized protein LOC100819825 [Glycine max] gi|255647710|gb|ACU24316.1| unknown [Glycine max] Length = 170 Score = 164 bits (414), Expect(2) = 3e-56 Identities = 74/88 (84%), Positives = 85/88 (96%) Frame = +3 Query: 240 GVPQLPGQGCSFHSFKTNTYKLTFMESPSGIKIILVTNPRIADLRDSLKYIYNLYVEYVV 419 G+PQLPGQGCSFHSF+TNTYKL+FMESPSGIKIILVT+PR DLR+SLKYIYNLYVEYVV Sbjct: 83 GMPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHPRTGDLRESLKYIYNLYVEYVV 142 Query: 420 KNPLYSPGTPIRCELFNTSLDQYVKNLA 503 KNPLY+PG+PIRCELFNT+LDQYV+ ++ Sbjct: 143 KNPLYTPGSPIRCELFNTTLDQYVRGIS 170 Score = 80.5 bits (197), Expect(2) = 3e-56 Identities = 37/41 (90%), Positives = 38/41 (92%) Frame = +1 Query: 1 FNRNGVCLLYREWNRPLRTLSSQQDHKLMFGLLFSLKSFTA 123 FNRNGVCLLYREWNRPLRTL +QQD KLMFGLLFSLKS TA Sbjct: 29 FNRNGVCLLYREWNRPLRTLDAQQDQKLMFGLLFSLKSLTA 69