BLASTX nr result

ID: Coptis24_contig00014851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014851
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial pro...   224   7e-57
emb|CBI29620.3| unnamed protein product [Vitis vinifera]              220   1e-55
ref|XP_002326494.1| predicted protein [Populus trichocarpa] gi|2...   219   1e-55
ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   218   3e-55
ref|XP_004148504.1| PREDICTED: uncharacterized mitochondrial pro...   218   3e-55

>ref|XP_002269047.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like [Vitis
           vinifera]
          Length = 749

 Score =  224 bits (570), Expect = 7e-57
 Identities = 106/138 (76%), Positives = 120/138 (86%), Gaps = 1/138 (0%)
 Frame = +2

Query: 2   IRRNFAGYLWYVKGDLSTVLDGMNVGMVINALMRDVRDKKVIDLIKSALVTPVITSRPDV 181
           IRR+FAGYLWY+KGDLST+LDGM VG+VI+ALMRDVRDKKVIDL+K+ALVTPVITS+ D 
Sbjct: 238 IRRSFAGYLWYIKGDLSTILDGMKVGLVISALMRDVRDKKVIDLLKAALVTPVITSQVDE 297

Query: 182 GVXXXXXXXXXXXX-VLADDEPKPDPYWLQTFFGFAPEEADKLPSWGHLGVLSPLLANIC 358
           G              VLA+DEPKPDPYWL+TFFGFAPEEA+KLPSWGH G+LSPLLAN+C
Sbjct: 298 GEKKKKKKRKYQKKRVLAEDEPKPDPYWLETFFGFAPEEAEKLPSWGHCGILSPLLANVC 357

Query: 359 LDELDRWMEGKIKEFYKP 412
           LDELDRWMEGKIKEFY+P
Sbjct: 358 LDELDRWMEGKIKEFYRP 375


>emb|CBI29620.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score =  220 bits (560), Expect = 1e-55
 Identities = 104/137 (75%), Positives = 118/137 (86%)
 Frame = +2

Query: 2   IRRNFAGYLWYVKGDLSTVLDGMNVGMVINALMRDVRDKKVIDLIKSALVTPVITSRPDV 181
           IRR+FAGYLWY+KGDLST+LDGM VG+VI+ALMRDVRDKKVIDL+K+ALVTPVITS+   
Sbjct: 235 IRRSFAGYLWYIKGDLSTILDGMKVGLVISALMRDVRDKKVIDLLKAALVTPVITSQK-- 292

Query: 182 GVXXXXXXXXXXXXVLADDEPKPDPYWLQTFFGFAPEEADKLPSWGHLGVLSPLLANICL 361
                         VLA+DEPKPDPYWL+TFFGFAPEEA+KLPSWGH G+LSPLLAN+CL
Sbjct: 293 -------------RVLAEDEPKPDPYWLETFFGFAPEEAEKLPSWGHCGILSPLLANVCL 339

Query: 362 DELDRWMEGKIKEFYKP 412
           DELDRWMEGKIKEFY+P
Sbjct: 340 DELDRWMEGKIKEFYRP 356


>ref|XP_002326494.1| predicted protein [Populus trichocarpa] gi|222833816|gb|EEE72293.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  219 bits (559), Expect = 1e-55
 Identities = 106/137 (77%), Positives = 117/137 (85%)
 Frame = +2

Query: 2   IRRNFAGYLWYVKGDLSTVLDGMNVGMVINALMRDVRDKKVIDLIKSALVTPVITSRPDV 181
           IRRNFAGYLWY++GDLSTVLDGM VG+VI+ALMRDVRDKKVIDLIK+AL TPVITSR + 
Sbjct: 163 IRRNFAGYLWYMRGDLSTVLDGMKVGLVISALMRDVRDKKVIDLIKTALTTPVITSRVEE 222

Query: 182 GVXXXXXXXXXXXXVLADDEPKPDPYWLQTFFGFAPEEADKLPSWGHLGVLSPLLANICL 361
                         VLA+DEPKPDPYWL TFFGFAPEEA+K+PSWGH G+LSPLLANICL
Sbjct: 223 P-KKKTKRKYQKKRVLAEDEPKPDPYWLDTFFGFAPEEAEKVPSWGHCGILSPLLANICL 281

Query: 362 DELDRWMEGKIKEFYKP 412
           DELDRWMEGKIKEFY+P
Sbjct: 282 DELDRWMEGKIKEFYRP 298


>ref|XP_004163762.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized mitochondrial
           protein ymf11-like [Cucumis sativus]
          Length = 722

 Score =  218 bits (556), Expect = 3e-55
 Identities = 107/138 (77%), Positives = 115/138 (83%), Gaps = 1/138 (0%)
 Frame = +2

Query: 2   IRRNFAGYLWYVKGDLSTVLDGMNVGMVINALMRDVRDKKVIDLIKSALVTPVITSRPDV 181
           IRR+FAGYLWYVKGDLST+LDGM VG VINALMRD+RDKKVIDLIKSALVTPVITS+ D 
Sbjct: 222 IRRHFAGYLWYVKGDLSTILDGMKVGAVINALMRDIRDKKVIDLIKSALVTPVITSKIDE 281

Query: 182 GVXXXXXXXXXXXX-VLADDEPKPDPYWLQTFFGFAPEEADKLPSWGHLGVLSPLLANIC 358
           G              VLA+DEPKPDPYWL+TFFGFAPEEA K PSWGH G+LSPLLANIC
Sbjct: 282 GEKKKKKKRKYQKKKVLAEDEPKPDPYWLETFFGFAPEEAVKNPSWGHCGILSPLLANIC 341

Query: 359 LDELDRWMEGKIKEFYKP 412
           LDELD WMEGKIK+FY P
Sbjct: 342 LDELDHWMEGKIKDFYSP 359


>ref|XP_004148504.1| PREDICTED: uncharacterized mitochondrial protein ymf11-like
           [Cucumis sativus]
          Length = 722

 Score =  218 bits (556), Expect = 3e-55
 Identities = 107/138 (77%), Positives = 115/138 (83%), Gaps = 1/138 (0%)
 Frame = +2

Query: 2   IRRNFAGYLWYVKGDLSTVLDGMNVGMVINALMRDVRDKKVIDLIKSALVTPVITSRPDV 181
           IRR+FAGYLWYVKGDLST+LDGM VG VINALMRD+RDKKVIDLIKSALVTPVITS+ D 
Sbjct: 222 IRRHFAGYLWYVKGDLSTILDGMKVGAVINALMRDIRDKKVIDLIKSALVTPVITSKIDE 281

Query: 182 GVXXXXXXXXXXXX-VLADDEPKPDPYWLQTFFGFAPEEADKLPSWGHLGVLSPLLANIC 358
           G              VLA+DEPKPDPYWL+TFFGFAPEEA K PSWGH G+LSPLLANIC
Sbjct: 282 GEKKKKKKRKYQKKKVLAEDEPKPDPYWLETFFGFAPEEAVKNPSWGHCGILSPLLANIC 341

Query: 359 LDELDRWMEGKIKEFYKP 412
           LDELD WMEGKIK+FY P
Sbjct: 342 LDELDHWMEGKIKDFYSP 359


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