BLASTX nr result

ID: Coptis24_contig00014844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014844
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310984.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22
emb|CBI34793.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002281705.1| PREDICTED: uncharacterized protein LOC100256...   107   1e-21
ref|XP_002514464.1| conserved hypothetical protein [Ricinus comm...    96   3e-18
ref|XP_002887517.1| hypothetical protein ARALYDRAFT_476537 [Arab...    91   8e-17

>ref|XP_002310984.1| predicted protein [Populus trichocarpa] gi|222850804|gb|EEE88351.1|
           predicted protein [Populus trichocarpa]
          Length = 608

 Score =  109 bits (273), Expect = 2e-22
 Identities = 53/92 (57%), Positives = 72/92 (78%)
 Frame = -1

Query: 277 GLLLLGAISSVPTLSESSKRACVELICKLMEEQRDLIVSHGESVLPEVLAGIGYALSSSQ 98
           G+LLLGA SSVP++SESSK  C+EL+C+L+E++  L+   G  ++P+VLAGIGYAL SS 
Sbjct: 146 GVLLLGAFSSVPSVSESSKTVCLELLCRLLEDEYRLVSPFG-GLIPDVLAGIGYALCSSV 204

Query: 97  LVYFGRLLNSLFGIWSKEGGVCGVLSHGLMVL 2
           +VY+ R LN+L GIW +E G  G +SHGLM+L
Sbjct: 205 IVYYARTLNALLGIWGREDGPPGSVSHGLMIL 236


>emb|CBI34793.3| unnamed protein product [Vitis vinifera]
          Length = 829

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/92 (57%), Positives = 69/92 (75%)
 Frame = -1

Query: 277 GLLLLGAISSVPTLSESSKRACVELICKLMEEQRDLIVSHGESVLPEVLAGIGYALSSSQ 98
           G+LLLGA S VP  SE SK  C+EL+C+L+EE+  LI S  E ++P++L GIGYALSSS 
Sbjct: 148 GILLLGAFSVVPVASEHSKTVCLELLCRLLEEEYQLIGS-SEELIPDILGGIGYALSSSG 206

Query: 97  LVYFGRLLNSLFGIWSKEGGVCGVLSHGLMVL 2
             +F ++LNSL GIW KEGG  G +SHGL++L
Sbjct: 207 NAHFAQILNSLLGIWGKEGGPHGNVSHGLIIL 238


>ref|XP_002281705.1| PREDICTED: uncharacterized protein LOC100256489 [Vitis vinifera]
          Length = 819

 Score =  107 bits (266), Expect = 1e-21
 Identities = 53/92 (57%), Positives = 69/92 (75%)
 Frame = -1

Query: 277 GLLLLGAISSVPTLSESSKRACVELICKLMEEQRDLIVSHGESVLPEVLAGIGYALSSSQ 98
           G+LLLGA S VP  SE SK  C+EL+C+L+EE+  LI S  E ++P++L GIGYALSSS 
Sbjct: 148 GILLLGAFSVVPVASEHSKTVCLELLCRLLEEEYQLIGS-SEELIPDILGGIGYALSSSG 206

Query: 97  LVYFGRLLNSLFGIWSKEGGVCGVLSHGLMVL 2
             +F ++LNSL GIW KEGG  G +SHGL++L
Sbjct: 207 NAHFAQILNSLLGIWGKEGGPHGNVSHGLIIL 238


>ref|XP_002514464.1| conserved hypothetical protein [Ricinus communis]
           gi|223546460|gb|EEF47960.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 829

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/91 (52%), Positives = 67/91 (73%)
 Frame = -1

Query: 274 LLLLGAISSVPTLSESSKRACVELICKLMEEQRDLIVSHGESVLPEVLAGIGYALSSSQL 95
           +LLLGA + VP+ +E+SK  C+EL+C+L++E   L VS  + ++P VLAGIGYAL SS  
Sbjct: 154 VLLLGAFAFVPSATETSKTVCLELLCRLLDEYYKL-VSSVDGLIPNVLAGIGYALCSSVN 212

Query: 94  VYFGRLLNSLFGIWSKEGGVCGVLSHGLMVL 2
            Y+ R+L++ FGIW KE G  G +SHGLM+L
Sbjct: 213 AYYVRILDAFFGIWGKEDGPHGNVSHGLMIL 243


>ref|XP_002887517.1| hypothetical protein ARALYDRAFT_476537 [Arabidopsis lyrata subsp.
           lyrata] gi|297333358|gb|EFH63776.1| hypothetical protein
           ARALYDRAFT_476537 [Arabidopsis lyrata subsp. lyrata]
          Length = 803

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 52/103 (50%), Positives = 71/103 (68%)
 Frame = -1

Query: 310 LYPHLVVIPPSGLLLLGAISSVPTLSESSKRACVELICKLMEEQRDLIVSHGESVLPEVL 131
           L P LV      +L+ GA + VP+LS   K  C+EL+C+L+EE+  L+ S  E ++P +L
Sbjct: 139 LQPTLVA---QSVLVSGAFACVPSLSGDLKLLCLELLCRLLEEEYSLVGSQ-EELVPVLL 194

Query: 130 AGIGYALSSSQLVYFGRLLNSLFGIWSKEGGVCGVLSHGLMVL 2
           AGIGYALSSS  V++ RLL+ LFGIW K+ G  G ++HGLMVL
Sbjct: 195 AGIGYALSSSLDVHYLRLLDLLFGIWLKDEGPRGSVTHGLMVL 237


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