BLASTX nr result

ID: Coptis24_contig00014831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014831
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300788.1| predicted protein [Populus trichocarpa] gi|2...   217   1e-54
ref|XP_002307636.1| predicted protein [Populus trichocarpa] gi|2...   211   1e-52
ref|XP_002263239.1| PREDICTED: F-box/kelch-repeat protein OR23-l...   209   4e-52
emb|CAN79913.1| hypothetical protein VITISV_027398 [Vitis vinifera]   209   4e-52
ref|XP_002521014.1| conserved hypothetical protein [Ricinus comm...   205   4e-51

>ref|XP_002300788.1| predicted protein [Populus trichocarpa] gi|222842514|gb|EEE80061.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score =  217 bits (552), Expect = 1e-54
 Identities = 114/204 (55%), Positives = 135/204 (66%), Gaps = 4/204 (1%)
 Frame = +2

Query: 5   SSSNSQVETLALTTLIPNLPNDXXXXXXXXXXXXHHSRLKPTCKSWKHFFSSKPLNFSLR 184
           SSS SQ++     TLIP LPND            HH+R+KPTCKSW  F SS    FSLR
Sbjct: 6   SSSLSQLQINETQTLIPGLPNDIASLILSLIPYSHHARVKPTCKSWHTFLSSTEALFSLR 65

Query: 185 Q--KFHSHLLCLFPQDPSISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIAFNYHLY 358
           +  +  +HLL +FPQDPSIS P+LFDP+NLAWRP+P MPCN  +YGL NF SI+   +LY
Sbjct: 66  RHPRRSNHLLIIFPQDPSISAPYLFDPQNLAWRPLPRMPCNPNVYGLCNFTSISMGPNLY 125

Query: 359 VIGGSLFDARSFPMDRPSASASIYRFDMFTNHWVCLSPMLSARGSF--XXXXXXXXXXXX 532
           V+GGSLFD RSFPMDRPS ++S++RF+     W  L PMLS RGSF              
Sbjct: 126 VLGGSLFDTRSFPMDRPSPTSSVFRFNFVDFLWEKLCPMLSPRGSFACAAVPDSGQIIVA 185

Query: 533 XXXSRHAMFGAAGSRMSSVERYDV 604
              SRHA FGAAGSR+SSVERYDV
Sbjct: 186 GGGSRHAWFGAAGSRISSVERYDV 209


>ref|XP_002307636.1| predicted protein [Populus trichocarpa] gi|222857085|gb|EEE94632.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  211 bits (536), Expect = 1e-52
 Identities = 107/204 (52%), Positives = 132/204 (64%), Gaps = 4/204 (1%)
 Frame = +2

Query: 5   SSSNSQVETLALTTLIPNLPNDXXXXXXXXXXXXHHSRLKPTCKSWKHFFSSKPLNFSLR 184
           +SS+SQ++     TLIP +PND            HHSR+KPTCKSW  F SS    F LR
Sbjct: 5   ASSSSQLQINETQTLIPGIPNDIASQILSMIPYSHHSRIKPTCKSWHIFLSSTKTLFLLR 64

Query: 185 QKFH--SHLLCLFPQDPSISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIAFNYHLY 358
                 +HLL +FPQDP IS P+LFDP+NLAWRP+PPMPCN  +YGL NF S++   +LY
Sbjct: 65  HNLRHSNHLLIIFPQDPFISLPYLFDPQNLAWRPLPPMPCNPHVYGLCNFTSVSMGPNLY 124

Query: 359 VIGGSLFDARSFPMDRPSASASIYRFDMFTNHWVCLSPMLSARGSF--XXXXXXXXXXXX 532
           V+GGSLFD RS+P+DRPS ++S++RF+     W  L PM+S RGSF              
Sbjct: 125 VLGGSLFDTRSYPIDRPSPTSSVFRFNFVDFLWEKLCPMISPRGSFACVAVPDWDQIIVA 184

Query: 533 XXXSRHAMFGAAGSRMSSVERYDV 604
              SRH  FGAAGSR+SSVERYDV
Sbjct: 185 GGGSRHTWFGAAGSRISSVERYDV 208


>ref|XP_002263239.1| PREDICTED: F-box/kelch-repeat protein OR23-like [Vitis vinifera]
          Length = 429

 Score =  209 bits (531), Expect = 4e-52
 Identities = 120/210 (57%), Positives = 134/210 (63%), Gaps = 10/210 (4%)
 Frame = +2

Query: 5   SSSNSQVETLALT-------TLIPNLPNDXXXXXXXXXXXXHHSRLKPTCKSWKHFFSSK 163
           SSS    ETLALT       TLIP LPND              +RLK   KSWK F SSK
Sbjct: 17  SSSPPIDETLALTLTLTLNLTLIPGLPNDVSALILSMIPYSCLARLKSISKSWKLFLSSK 76

Query: 164 PLNFSLRQKFH-SHLLCLFPQDPSISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIA 340
            L  SLRQ  H S LLCLFPQDP+I+ PFLFDPK LAW P+PP+P N  +YGL NF SI+
Sbjct: 77  TL-ISLRQNNHQSQLLCLFPQDPAIANPFLFDPKTLAWCPLPPLPINPYVYGLCNFTSIS 135

Query: 341 FNYHLYVIGGSLFDARSFPMDRPSASASIYRFDMFTNHWVCLSPMLSARGSF--XXXXXX 514
              +LYV+GGSLFD RSFP+DRPS S+S++RF+  T  W  LSPMLS RGSF        
Sbjct: 136 LGPNLYVLGGSLFDTRSFPLDRPSPSSSVFRFNFLTYSWELLSPMLSPRGSFACVALPNS 195

Query: 515 XXXXXXXXXSRHAMFGAAGSRMSSVERYDV 604
                    SRH MFGAAGSRMSSVERYDV
Sbjct: 196 DQIIVAGGGSRHTMFGAAGSRMSSVERYDV 225


>emb|CAN79913.1| hypothetical protein VITISV_027398 [Vitis vinifera]
          Length = 517

 Score =  209 bits (531), Expect = 4e-52
 Identities = 120/210 (57%), Positives = 134/210 (63%), Gaps = 10/210 (4%)
 Frame = +2

Query: 5   SSSNSQVETLALT-------TLIPNLPNDXXXXXXXXXXXXHHSRLKPTCKSWKHFFSSK 163
           SSS    ETLALT       TLIP LPND              +RLK   KSWK F SSK
Sbjct: 21  SSSPPIDETLALTLTLTLNLTLIPGLPNDVSALILSMIPYSCLARLKSISKSWKLFLSSK 80

Query: 164 PLNFSLRQKFH-SHLLCLFPQDPSISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIA 340
            L  SLRQ  H S LLCLFPQDP+I+ PFLFDPK LAW P+PP+P N  +YGL NF SI+
Sbjct: 81  TL-ISLRQNNHQSQLLCLFPQDPAIANPFLFDPKTLAWCPLPPLPINPYVYGLCNFTSIS 139

Query: 341 FNYHLYVIGGSLFDARSFPMDRPSASASIYRFDMFTNHWVCLSPMLSARGSF--XXXXXX 514
              +LYV+GGSLFD RSFP+DRPS S+S++RF+  T  W  LSPMLS RGSF        
Sbjct: 140 LGPNLYVLGGSLFDTRSFPLDRPSPSSSVFRFNFLTYSWELLSPMLSPRGSFACVALPNS 199

Query: 515 XXXXXXXXXSRHAMFGAAGSRMSSVERYDV 604
                    SRH MFGAAGSRMSSVERYDV
Sbjct: 200 DQIIVAGGGSRHTMFGAAGSRMSSVERYDV 229


>ref|XP_002521014.1| conserved hypothetical protein [Ricinus communis]
           gi|223539851|gb|EEF41431.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 428

 Score =  205 bits (522), Expect = 4e-51
 Identities = 109/197 (55%), Positives = 129/197 (65%), Gaps = 4/197 (2%)
 Frame = +2

Query: 26  ETLALTTLIPNLPNDXXXXXXXXXXXXHHSRLKPTCKSWKHFFSSKPLNFSLRQKFHS-- 199
           + L+ +TLIP LPND            HHSR+K T KSW  F SSK L  SLRQ   +  
Sbjct: 19  DELSTSTLIPGLPNDVAAQILSTVPYSHHSRIKQTSKSWYTFLSSKTL-VSLRQHLLNLN 77

Query: 200 HLLCLFPQDPSISPPFLFDPKNLAWRPIPPMPCNSQLYGLTNFISIAFNYHLYVIGGSLF 379
           HLL +FPQDPSIS P+LFDPKNLAW+P+ PMPCN  +YGL NF SI+    LYV+GGS F
Sbjct: 78  HLLVIFPQDPSISSPYLFDPKNLAWKPLLPMPCNPHVYGLCNFTSISLGPTLYVLGGSHF 137

Query: 380 DARSFPMDRPSASASIYRFDMFTNHWVCLSPMLSARGSF--XXXXXXXXXXXXXXXSRHA 553
           D RSFPMDRP+ S+S++R++   + W  LSPMLS RGSF                 SRH 
Sbjct: 138 DTRSFPMDRPTPSSSVFRYNFIDSRWDQLSPMLSPRGSFACIAVPNSGKIIVAGGGSRHT 197

Query: 554 MFGAAGSRMSSVERYDV 604
           +FGAAGSRMSSVE YDV
Sbjct: 198 LFGAAGSRMSSVEMYDV 214


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