BLASTX nr result

ID: Coptis24_contig00014828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014828
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880026.1| hypothetical protein ARALYDRAFT_483412 [Arab...    57   2e-06
ref|XP_002862502.1| hypothetical protein ARALYDRAFT_497422 [Arab...    57   2e-06
ref|NP_850384.1| uncharacterized protein [Arabidopsis thaliana] ...    56   3e-06
ref|XP_002320451.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002880026.1| hypothetical protein ARALYDRAFT_483412 [Arabidopsis lyrata subsp.
           lyrata] gi|297325865|gb|EFH56285.1| hypothetical protein
           ARALYDRAFT_483412 [Arabidopsis lyrata subsp. lyrata]
          Length = 284

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/52 (53%), Positives = 35/52 (67%)
 Frame = -1

Query: 162 ASEQLTFFLNRFQSANGLKXXXXXXXSFKDTCILELSQDLDQDAGVLSTHMK 7
           ASEQL++FLN+ +SA G+K         KDTCI+ELSQ LDQD   L  H+K
Sbjct: 72  ASEQLSYFLNQLESAIGIKVSSLELEPIKDTCIVELSQRLDQDVSNLGEHIK 123


>ref|XP_002862502.1| hypothetical protein ARALYDRAFT_497422 [Arabidopsis lyrata subsp.
           lyrata] gi|297308060|gb|EFH38760.1| hypothetical protein
           ARALYDRAFT_497422 [Arabidopsis lyrata subsp. lyrata]
          Length = 284

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/52 (53%), Positives = 35/52 (67%)
 Frame = -1

Query: 162 ASEQLTFFLNRFQSANGLKXXXXXXXSFKDTCILELSQDLDQDAGVLSTHMK 7
           ASEQL++FLN+ +SA G+K         KDTCI+ELSQ LDQD   L  H+K
Sbjct: 72  ASEQLSYFLNQLESAIGIKVSSLELEPIKDTCIVELSQRLDQDVSNLGEHIK 123


>ref|NP_850384.1| uncharacterized protein [Arabidopsis thaliana]
           gi|26452917|dbj|BAC43536.1| unknown protein [Arabidopsis
           thaliana] gi|114050605|gb|ABI49452.1| At2g43110
           [Arabidopsis thaliana] gi|330255116|gb|AEC10210.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 288

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/52 (53%), Positives = 32/52 (61%)
 Frame = -1

Query: 162 ASEQLTFFLNRFQSANGLKXXXXXXXSFKDTCILELSQDLDQDAGVLSTHMK 7
           ASEQL +FLN   SA G+K         KDTCI+ELSQ LDQD   L  H+K
Sbjct: 76  ASEQLNYFLNHLDSAIGIKVSSLELEPIKDTCIVELSQGLDQDVSNLGEHIK 127


>ref|XP_002320451.1| predicted protein [Populus trichocarpa] gi|222861224|gb|EEE98766.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/54 (50%), Positives = 36/54 (66%)
 Frame = -1

Query: 162 ASEQLTFFLNRFQSANGLKXXXXXXXSFKDTCILELSQDLDQDAGVLSTHMKDA 1
           AS+QL+FF++ FQSANG++       S K+TC  ELSQ+  QD   L +HMK A
Sbjct: 59  ASQQLSFFISEFQSANGVQLSSIELESIKETCFAELSQESGQDVMALGSHMKAA 112


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