BLASTX nr result

ID: Coptis24_contig00014825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014825
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]    63   4e-08
gb|ABI34376.1| Polyprotein, putative [Solanum demissum]                59   1e-06
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]    58   2e-06
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]    56   5e-06

>emb|CAN64055.1| hypothetical protein VITISV_044406 [Vitis vinifera]
          Length = 633

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
 Frame = -1

Query: 156 DLRKWLEAMRSEMESMYSNNVWE--DPLPNIKPIKNK*LFKRKRGVDRKV*TFK 1
           D  KWL AM+SEMESMYSN VWE  +P   +KPI  K ++K+KRG+D K  T+K
Sbjct: 121 DADKWLVAMKSEMESMYSNQVWELVEPPKGVKPIGCKWIYKKKRGIDGKXZTYK 174


>gb|ABI34376.1| Polyprotein, putative [Solanum demissum]
          Length = 380

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
 Frame = -1

Query: 156 DLRKWLEAMRSEMESMYSNNVW---EDPLPNIKPIKNK*LFKRKRGVDRKV*TFK 1
           D  KW+ AM+SEMESMYSN VW   E  +  +KPI  K ++K+KRGV  KV T+K
Sbjct: 292 DAEKWIVAMKSEMESMYSNKVWDLVEPHVDGVKPIGCKWIYKKKRGVVGKVQTYK 346


>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
          Length = 961

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/55 (56%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = -1

Query: 159 IDLRKWLEAMRSEMESMYSNNVWE--DPLPNIKPIKNK*LFKRKRGVDRKV*TFK 1
           +D   W EAM+ E+ESMYSN+VWE  D    IKPI  K ++KRKRG + KV TFK
Sbjct: 591 VDRETWQEAMKLEIESMYSNSVWELVDLPEGIKPIGCKWIYKRKRGPNGKVETFK 645


>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = -1

Query: 159 IDLRKWLEAMRSEMESMYSNNVWE--DPLPNIKPIKNK*LFKRKRGVDRKV*TFK 1
           +D  KW EAM+ E+ESMYSN+VW+  D    IKPI  K ++K KRG + KV TFK
Sbjct: 155 VDREKWQEAMKLEIESMYSNSVWKLVDLPEGIKPIGCKWIYKXKRGPNGKVETFK 209


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