BLASTX nr result
ID: Coptis24_contig00014821
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014821 (842 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycin... 251 2e-64 emb|CBI20486.3| unnamed protein product [Vitis vinifera] 248 2e-63 ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycin... 246 5e-63 ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloro... 243 3e-62 ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatu... 242 7e-62 >ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycine max] gi|255629161|gb|ACU14925.1| unknown [Glycine max] Length = 194 Score = 251 bits (640), Expect = 2e-64 Identities = 122/172 (70%), Positives = 144/172 (83%), Gaps = 1/172 (0%) Frame = -1 Query: 794 MATMEAXXXXXXXXXXXXXSFFGQRLSP-SLYSSLPVKSVEKPCLIVMRLKRWERKECKP 618 MA M A SF GQRLSP +L S LP KS EK C IVMRLKRWERKECKP Sbjct: 1 MAAMAALQSSMVGLSLSSNSFLGQRLSPITLPSLLPGKSTEKQCPIVMRLKRWERKECKP 60 Query: 617 NSLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGE 438 NSLP+L KMHV++GDTV++ISG E+GK+GE+T++FKHNST+I+KD+NLKTKH+KSRE+GE Sbjct: 61 NSLPILHKMHVKLGDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEGE 120 Query: 437 PGQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILQDGTRVRYLIKTGEIIDS 282 PGQI+K+EGP+HSSNVMLYSKDQ VASRVGHK+L +G +VRYLIKTGEIIDS Sbjct: 121 PGQIIKIEGPIHSSNVMLYSKDQKVASRVGHKVLDNGKKVRYLIKTGEIIDS 172 >emb|CBI20486.3| unnamed protein product [Vitis vinifera] Length = 236 Score = 248 bits (632), Expect = 2e-63 Identities = 121/177 (68%), Positives = 143/177 (80%) Frame = -1 Query: 812 GSKETRMATMEAXXXXXXXXXXXXXSFFGQRLSPSLYSSLPVKSVEKPCLIVMRLKRWER 633 G + T+MA M A SF GQ SP LY SL KS EKPC IVMRLKRWER Sbjct: 40 GVETTKMAAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSL-AKSTEKPCPIVMRLKRWER 98 Query: 632 KECKPNSLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKS 453 KECKPNSLP+L KMHV++GDTVKIISG EKG+ GE++++F+HNST+++KDINLKTKH+K Sbjct: 99 KECKPNSLPVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKG 158 Query: 452 REQGEPGQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILQDGTRVRYLIKTGEIIDS 282 R + EPGQI+K+E P+HSSNVMLYSK+QNVASRVGHKIL++G RVRYLIKTGEIIDS Sbjct: 159 RGEDEPGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDS 215 >ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycine max] gi|255628481|gb|ACU14585.1| unknown [Glycine max] Length = 193 Score = 246 bits (628), Expect = 5e-63 Identities = 120/172 (69%), Positives = 142/172 (82%), Gaps = 1/172 (0%) Frame = -1 Query: 794 MATMEAXXXXXXXXXXXXXSFFGQRLSP-SLYSSLPVKSVEKPCLIVMRLKRWERKECKP 618 MA M A SF GQ L P +L S LP KS EK C IVMRLKRWERKECKP Sbjct: 1 MAAMAALQSSMAGLSLSSKSFLGQLLPPITLPSLLPGKSTEKQCPIVMRLKRWERKECKP 60 Query: 617 NSLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGE 438 NSLP+L KMHV++GDTV++ISG E+GK+GE+T++FKHNST+I+KD+NLKTKH+KSRE+GE Sbjct: 61 NSLPILHKMHVKLGDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEGE 120 Query: 437 PGQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILQDGTRVRYLIKTGEIIDS 282 PGQI+K+EGP+HSSNVMLYSKDQ VASRVGHK+L +G +VRYLIKTGEIIDS Sbjct: 121 PGQIIKIEGPIHSSNVMLYSKDQKVASRVGHKVLDNGKKVRYLIKTGEIIDS 172 >ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 1 [Vitis vinifera] gi|359493940|ref|XP_003634697.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 2 [Vitis vinifera] gi|359493942|ref|XP_003634698.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 3 [Vitis vinifera] gi|147860928|emb|CAN78749.1| hypothetical protein VITISV_002445 [Vitis vinifera] Length = 191 Score = 243 bits (621), Expect = 3e-62 Identities = 119/171 (69%), Positives = 139/171 (81%) Frame = -1 Query: 794 MATMEAXXXXXXXXXXXXXSFFGQRLSPSLYSSLPVKSVEKPCLIVMRLKRWERKECKPN 615 MA M A SF GQ SP LY SL KS EKPC IVMRLKRWERKECKPN Sbjct: 1 MAAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSL-AKSTEKPCPIVMRLKRWERKECKPN 59 Query: 614 SLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGEP 435 SLP+L KMHV++GDTVKIISG EKG+ GE++++F+HNST+++KDINLKTKH+K R + EP Sbjct: 60 SLPVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKGRGEDEP 119 Query: 434 GQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILQDGTRVRYLIKTGEIIDS 282 GQI+K+E P+HSSNVMLYSK+QNVASRVGHKIL++G RVRYLIKTGEIIDS Sbjct: 120 GQIIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDS 170 >ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatula] gi|355485642|gb|AES66845.1| 50S ribosomal protein L24 [Medicago truncatula] gi|388513937|gb|AFK45030.1| unknown [Medicago truncatula] Length = 194 Score = 242 bits (618), Expect = 7e-62 Identities = 113/152 (74%), Positives = 137/152 (90%), Gaps = 1/152 (0%) Frame = -1 Query: 734 FFGQRLSP-SLYSSLPVKSVEKPCLIVMRLKRWERKECKPNSLPMLQKMHVRIGDTVKII 558 FFGQ LSP +L LP K +K C IVM+LKRWERKECKPNSLP+L K+HV++GDTVK+I Sbjct: 23 FFGQPLSPITLSPLLPGKPTDKQCRIVMKLKRWERKECKPNSLPVLHKLHVKVGDTVKVI 82 Query: 557 SGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGEPGQIVKVEGPVHSSNVMLYS 378 SGHEKG+IGEVT++FKHNSTII+KDINLKTKH+KSR++GEPGQI K+EGP+HSSNVMLYS Sbjct: 83 SGHEKGQIGEVTKIFKHNSTIIVKDINLKTKHVKSRQEGEPGQINKIEGPIHSSNVMLYS 142 Query: 377 KDQNVASRVGHKILQDGTRVRYLIKTGEIIDS 282 K++NV SRVGHK++ +G +VRYLIKTGE+IDS Sbjct: 143 KEKNVVSRVGHKVIDNGKKVRYLIKTGEVIDS 174