BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014821
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycin...   251   2e-64
emb|CBI20486.3| unnamed protein product [Vitis vinifera]              248   2e-63
ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycin...   246   5e-63
ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloro...   243   3e-62
ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatu...   242   7e-62

>ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycine max]
           gi|255629161|gb|ACU14925.1| unknown [Glycine max]
          Length = 194

 Score =  251 bits (640), Expect = 2e-64
 Identities = 122/172 (70%), Positives = 144/172 (83%), Gaps = 1/172 (0%)
 Frame = -1

Query: 794 MATMEAXXXXXXXXXXXXXSFFGQRLSP-SLYSSLPVKSVEKPCLIVMRLKRWERKECKP 618
           MA M A             SF GQRLSP +L S LP KS EK C IVMRLKRWERKECKP
Sbjct: 1   MAAMAALQSSMVGLSLSSNSFLGQRLSPITLPSLLPGKSTEKQCPIVMRLKRWERKECKP 60

Query: 617 NSLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGE 438
           NSLP+L KMHV++GDTV++ISG E+GK+GE+T++FKHNST+I+KD+NLKTKH+KSRE+GE
Sbjct: 61  NSLPILHKMHVKLGDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEGE 120

Query: 437 PGQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILQDGTRVRYLIKTGEIIDS 282
           PGQI+K+EGP+HSSNVMLYSKDQ VASRVGHK+L +G +VRYLIKTGEIIDS
Sbjct: 121 PGQIIKIEGPIHSSNVMLYSKDQKVASRVGHKVLDNGKKVRYLIKTGEIIDS 172


>emb|CBI20486.3| unnamed protein product [Vitis vinifera]
          Length = 236

 Score =  248 bits (632), Expect = 2e-63
 Identities = 121/177 (68%), Positives = 143/177 (80%)
 Frame = -1

Query: 812 GSKETRMATMEAXXXXXXXXXXXXXSFFGQRLSPSLYSSLPVKSVEKPCLIVMRLKRWER 633
           G + T+MA M A             SF GQ  SP LY SL  KS EKPC IVMRLKRWER
Sbjct: 40  GVETTKMAAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSL-AKSTEKPCPIVMRLKRWER 98

Query: 632 KECKPNSLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKS 453
           KECKPNSLP+L KMHV++GDTVKIISG EKG+ GE++++F+HNST+++KDINLKTKH+K 
Sbjct: 99  KECKPNSLPVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKG 158

Query: 452 REQGEPGQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILQDGTRVRYLIKTGEIIDS 282
           R + EPGQI+K+E P+HSSNVMLYSK+QNVASRVGHKIL++G RVRYLIKTGEIIDS
Sbjct: 159 RGEDEPGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDS 215


>ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycine max]
           gi|255628481|gb|ACU14585.1| unknown [Glycine max]
          Length = 193

 Score =  246 bits (628), Expect = 5e-63
 Identities = 120/172 (69%), Positives = 142/172 (82%), Gaps = 1/172 (0%)
 Frame = -1

Query: 794 MATMEAXXXXXXXXXXXXXSFFGQRLSP-SLYSSLPVKSVEKPCLIVMRLKRWERKECKP 618
           MA M A             SF GQ L P +L S LP KS EK C IVMRLKRWERKECKP
Sbjct: 1   MAAMAALQSSMAGLSLSSKSFLGQLLPPITLPSLLPGKSTEKQCPIVMRLKRWERKECKP 60

Query: 617 NSLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGE 438
           NSLP+L KMHV++GDTV++ISG E+GK+GE+T++FKHNST+I+KD+NLKTKH+KSRE+GE
Sbjct: 61  NSLPILHKMHVKLGDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEGE 120

Query: 437 PGQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILQDGTRVRYLIKTGEIIDS 282
           PGQI+K+EGP+HSSNVMLYSKDQ VASRVGHK+L +G +VRYLIKTGEIIDS
Sbjct: 121 PGQIIKIEGPIHSSNVMLYSKDQKVASRVGHKVLDNGKKVRYLIKTGEIIDS 172


>ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 1
           [Vitis vinifera] gi|359493940|ref|XP_003634697.1|
           PREDICTED: 50S ribosomal protein L24, chloroplastic
           isoform 2 [Vitis vinifera]
           gi|359493942|ref|XP_003634698.1| PREDICTED: 50S
           ribosomal protein L24, chloroplastic isoform 3 [Vitis
           vinifera] gi|147860928|emb|CAN78749.1| hypothetical
           protein VITISV_002445 [Vitis vinifera]
          Length = 191

 Score =  243 bits (621), Expect = 3e-62
 Identities = 119/171 (69%), Positives = 139/171 (81%)
 Frame = -1

Query: 794 MATMEAXXXXXXXXXXXXXSFFGQRLSPSLYSSLPVKSVEKPCLIVMRLKRWERKECKPN 615
           MA M A             SF GQ  SP LY SL  KS EKPC IVMRLKRWERKECKPN
Sbjct: 1   MAAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSL-AKSTEKPCPIVMRLKRWERKECKPN 59

Query: 614 SLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGEP 435
           SLP+L KMHV++GDTVKIISG EKG+ GE++++F+HNST+++KDINLKTKH+K R + EP
Sbjct: 60  SLPVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKGRGEDEP 119

Query: 434 GQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILQDGTRVRYLIKTGEIIDS 282
           GQI+K+E P+HSSNVMLYSK+QNVASRVGHKIL++G RVRYLIKTGEIIDS
Sbjct: 120 GQIIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDS 170


>ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatula]
           gi|355485642|gb|AES66845.1| 50S ribosomal protein L24
           [Medicago truncatula] gi|388513937|gb|AFK45030.1|
           unknown [Medicago truncatula]
          Length = 194

 Score =  242 bits (618), Expect = 7e-62
 Identities = 113/152 (74%), Positives = 137/152 (90%), Gaps = 1/152 (0%)
 Frame = -1

Query: 734 FFGQRLSP-SLYSSLPVKSVEKPCLIVMRLKRWERKECKPNSLPMLQKMHVRIGDTVKII 558
           FFGQ LSP +L   LP K  +K C IVM+LKRWERKECKPNSLP+L K+HV++GDTVK+I
Sbjct: 23  FFGQPLSPITLSPLLPGKPTDKQCRIVMKLKRWERKECKPNSLPVLHKLHVKVGDTVKVI 82

Query: 557 SGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGEPGQIVKVEGPVHSSNVMLYS 378
           SGHEKG+IGEVT++FKHNSTII+KDINLKTKH+KSR++GEPGQI K+EGP+HSSNVMLYS
Sbjct: 83  SGHEKGQIGEVTKIFKHNSTIIVKDINLKTKHVKSRQEGEPGQINKIEGPIHSSNVMLYS 142

Query: 377 KDQNVASRVGHKILQDGTRVRYLIKTGEIIDS 282
           K++NV SRVGHK++ +G +VRYLIKTGE+IDS
Sbjct: 143 KEKNVVSRVGHKVIDNGKKVRYLIKTGEVIDS 174