BLASTX nr result

ID: Coptis24_contig00014812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014812
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera] ...   129   3e-28
ref|XP_002520011.1| conserved hypothetical protein [Ricinus comm...   127   1e-27
ref|XP_002328986.1| predicted protein [Populus trichocarpa] gi|2...   125   5e-27
dbj|BAJ91520.1| predicted protein [Hordeum vulgare subsp. vulgare]    124   6e-27
ref|XP_001768092.1| predicted protein [Physcomitrella patens sub...   123   1e-26

>ref|XP_002275116.1| PREDICTED: protein TOPLESS [Vitis vinifera]
           gi|297737353|emb|CBI26554.3| unnamed protein product
           [Vitis vinifera]
          Length = 1135

 Score =  129 bits (323), Expect = 3e-28
 Identities = 56/90 (62%), Positives = 70/90 (77%)
 Frame = -2

Query: 279 YSFGTTGEVRHQLRIDAHIGGVNDIAFAYSGSNVCVVTCGDDRKVKVWDAASGHILYVFE 100
           Y++  TGE+R  L IDAHIGGVND+AFA+    +C+VTCGDD+ +KVWDA +G  LY FE
Sbjct: 434 YTYNPTGELRQHLEIDAHIGGVNDVAFAHPNKQLCIVTCGDDKTIKVWDAQTGRRLYTFE 493

Query: 99  GHKASVHSVCPHDTEGVQFIASSAADGKIK 10
           GH+A V+SVCPH  E +QFI S+A DGKIK
Sbjct: 494 GHEAPVYSVCPHYKENIQFIFSTAIDGKIK 523


>ref|XP_002520011.1| conserved hypothetical protein [Ricinus communis]
           gi|223540775|gb|EEF42335.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1137

 Score =  127 bits (318), Expect = 1e-27
 Identities = 55/90 (61%), Positives = 69/90 (76%)
 Frame = -2

Query: 279 YSFGTTGEVRHQLRIDAHIGGVNDIAFAYSGSNVCVVTCGDDRKVKVWDAASGHILYVFE 100
           Y++  TGE+R  L IDAH+GGVNDIAFA+    +C+VTCGDD+ +KVWDA +G   Y FE
Sbjct: 436 YAYNPTGELRQHLEIDAHVGGVNDIAFAHPNKQLCIVTCGDDKMIKVWDAVAGRRQYTFE 495

Query: 99  GHKASVHSVCPHDTEGVQFIASSAADGKIK 10
           GH+A V+SVCPH  E +QFI S+A DGKIK
Sbjct: 496 GHEAPVYSVCPHYKENIQFIFSTAIDGKIK 525


>ref|XP_002328986.1| predicted protein [Populus trichocarpa] gi|222839220|gb|EEE77571.1|
           predicted protein [Populus trichocarpa]
          Length = 1099

 Score =  125 bits (313), Expect = 5e-27
 Identities = 54/90 (60%), Positives = 69/90 (76%)
 Frame = -2

Query: 279 YSFGTTGEVRHQLRIDAHIGGVNDIAFAYSGSNVCVVTCGDDRKVKVWDAASGHILYVFE 100
           Y++  TGE R  L IDAH+GGVNDIAFA+    +C+VTCGDD+ +KVWDA +G   Y+FE
Sbjct: 436 YTYNPTGEPRQHLEIDAHVGGVNDIAFAHPNKQLCIVTCGDDKMIKVWDAGAGGRQYIFE 495

Query: 99  GHKASVHSVCPHDTEGVQFIASSAADGKIK 10
           GH+A V+S+CPH  E +QFI S+A DGKIK
Sbjct: 496 GHEAPVYSLCPHYKENIQFIFSTAIDGKIK 525


>dbj|BAJ91520.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 934

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/91 (61%), Positives = 70/91 (76%)
 Frame = -2

Query: 282 TYSFGTTGEVRHQLRIDAHIGGVNDIAFAYSGSNVCVVTCGDDRKVKVWDAASGHILYVF 103
           TY+F   GE+R Q  IDAHIGGVNDIAF++   ++ ++TCGDD+ +KVWDA SG   Y F
Sbjct: 230 TYTFVPNGELRQQAEIDAHIGGVNDIAFSHPNKSLSIITCGDDKLIKVWDAQSGQKQYTF 289

Query: 102 EGHKASVHSVCPHDTEGVQFIASSAADGKIK 10
           EGH+ASV+SVCPH  E +QFI S+A DGKIK
Sbjct: 290 EGHEASVYSVCPHYKENIQFIFSTAIDGKIK 320


>ref|XP_001768092.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162680730|gb|EDQ67164.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1158

 Score =  123 bits (309), Expect = 1e-26
 Identities = 52/92 (56%), Positives = 69/92 (75%)
 Frame = -2

Query: 285 HTYSFGTTGEVRHQLRIDAHIGGVNDIAFAYSGSNVCVVTCGDDRKVKVWDAASGHILYV 106
           H Y++    ++R  L IDAH+GGVND+AF++    +CV+TCGDD+ +KVWDAA+G   Y 
Sbjct: 437 HIYAYNGGSDLRQHLEIDAHVGGVNDLAFSHPNKQLCVITCGDDKTIKVWDAATGRKQYT 496

Query: 105 FEGHKASVHSVCPHDTEGVQFIASSAADGKIK 10
           FEGH+A V+SVCPH  E +QFI S+A DGKIK
Sbjct: 497 FEGHEAPVYSVCPHHKESIQFIFSTAIDGKIK 528


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