BLASTX nr result

ID: Coptis24_contig00014796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014796
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22512.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002269988.1| PREDICTED: transcription factor bHLH113-like...    63   3e-08
emb|CAN67722.1| hypothetical protein VITISV_006021 [Vitis vinifera]    63   3e-08
ref|XP_002527479.1| transcription factor, putative [Ricinus comm...    61   1e-07
ref|NP_566639.1| transcription factor bHLH113 [Arabidopsis thali...    60   1e-07

>emb|CBI22512.3| unnamed protein product [Vitis vinifera]
          Length = 202

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +1

Query: 4   DLRSRGLCLVPIECTANVANNNGADFWSPA 93
           DLRSRGLCLVP+ECT +VANNNGAD+WSPA
Sbjct: 165 DLRSRGLCLVPVECTEHVANNNGADYWSPA 194


>ref|XP_002269988.1| PREDICTED: transcription factor bHLH113-like [Vitis vinifera]
          Length = 250

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +1

Query: 4   DLRSRGLCLVPIECTANVANNNGADFWSPA 93
           DLRSRGLCLVP+ECT +VANNNGAD+WSPA
Sbjct: 213 DLRSRGLCLVPVECTEHVANNNGADYWSPA 242


>emb|CAN67722.1| hypothetical protein VITISV_006021 [Vitis vinifera]
          Length = 400

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = +1

Query: 4   DLRSRGLCLVPIECTANVANNNGADFWSPA 93
           DLRSRGLCLVP+ECT +VANNNGAD+WSPA
Sbjct: 363 DLRSRGLCLVPVECTEHVANNNGADYWSPA 392


>ref|XP_002527479.1| transcription factor, putative [Ricinus communis]
           gi|223533119|gb|EEF34877.1| transcription factor,
           putative [Ricinus communis]
          Length = 239

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/30 (83%), Positives = 30/30 (100%)
 Frame = +1

Query: 4   DLRSRGLCLVPIECTANVANNNGADFWSPA 93
           DLRSRGLCLVP+ECTA+VA++NGAD+WSPA
Sbjct: 196 DLRSRGLCLVPVECTAHVASSNGADYWSPA 225


>ref|NP_566639.1| transcription factor bHLH113 [Arabidopsis thaliana]
           gi|75311549|sp|Q9LT67.1|BH113_ARATH RecName:
           Full=Transcription factor bHLH113; AltName: Full=Basic
           helix-loop-helix protein 113; Short=AtbHLH113;
           Short=bHLH 113; AltName: Full=Transcription factor EN
           61; AltName: Full=bHLH transcription factor bHLH113
           gi|11994473|dbj|BAB02475.1| unnamed protein product
           [Arabidopsis thaliana] gi|332642727|gb|AEE76248.1|
           transcription factor bHLH113 [Arabidopsis thaliana]
          Length = 270

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +1

Query: 4   DLRSRGLCLVPIECTANVANNNGADFWSPANMGRNVS 114
           DLRSRGLCLVP+  T +V N+NGADFWSPA MG   S
Sbjct: 227 DLRSRGLCLVPVSSTVHVENSNGADFWSPATMGHTTS 263


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