BLASTX nr result

ID: Coptis24_contig00014795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014795
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16358.1| unknown [Picea sitchensis]                              59   4e-07
sp|Q42840.1|HEM6_HORVU RecName: Full=Coproporphyrinogen-III oxid...    58   9e-07
dbj|BAJ95063.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   9e-07
ref|XP_004170545.1| PREDICTED: coproporphyrinogen-III oxidase, c...    57   1e-06
ref|XP_004147728.1| PREDICTED: coproporphyrinogen-III oxidase, c...    57   1e-06

>gb|ABR16358.1| unknown [Picea sitchensis]
          Length = 393

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 38/85 (44%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   QDIRRGRYVEFNLVESLSLSLALCV*WLDILYM*RFMIMALNLDWR*EVELRVFLSLP-R 177
           Q +RRGRYVEFNLV                    R     L    R E    + +SLP  
Sbjct: 324 QQLRRGRYVEFNLVYD------------------RGTTFGLKTGGRIE---SILMSLPLT 362

Query: 178 ADWKYDY*PMERSEEWKLLDACINP 252
           A W+YD+ P+E SEEWKLLDACINP
Sbjct: 363 ARWEYDHQPVEGSEEWKLLDACINP 387


>sp|Q42840.1|HEM6_HORVU RecName: Full=Coproporphyrinogen-III oxidase, chloroplastic;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase;
           Flags: Precursor gi|1212994|emb|CAA58037.1|
           coproporphyrinogen oxidase [Hordeum vulgare subsp.
           vulgare]
          Length = 391

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/85 (44%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   QDIRRGRYVEFNLVESLSLSLALCV*WLDILYM*RFMIMALNLDWR*EVELRVFLSLP-R 177
           Q +RRGRYVEFNLV                    R     L    R E    + +SLP  
Sbjct: 324 QQVRRGRYVEFNLVYD------------------RGTTFGLKTGGRIE---SILVSLPLT 362

Query: 178 ADWKYDY*PMERSEEWKLLDACINP 252
           A W+YD+ P E SEEWKLLDACINP
Sbjct: 363 ARWEYDHKPEEGSEEWKLLDACINP 387


>dbj|BAJ95063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 391

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 38/85 (44%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   QDIRRGRYVEFNLVESLSLSLALCV*WLDILYM*RFMIMALNLDWR*EVELRVFLSLP-R 177
           Q +RRGRYVEFNLV                    R     L    R E    + +SLP  
Sbjct: 324 QQVRRGRYVEFNLVYD------------------RGTTFGLKTGGRIE---SILVSLPLT 362

Query: 178 ADWKYDY*PMERSEEWKLLDACINP 252
           A W+YD+ P E SEEWKLLDACINP
Sbjct: 363 ARWEYDHKPEEGSEEWKLLDACINP 387


>ref|XP_004170545.1| PREDICTED: coproporphyrinogen-III oxidase, chloroplastic-like
           [Cucumis sativus]
          Length = 398

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/85 (44%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   QDIRRGRYVEFNLVESLSLSLALCV*WLDILYM*RFMIMALNLDWR*EVELRVFLSLP-R 177
           Q +RRGRYVEFNLV                    R     L    R E    + +SLP  
Sbjct: 331 QQLRRGRYVEFNLVYD------------------RGTTFGLKTGGRIE---SILVSLPLT 369

Query: 178 ADWKYDY*PMERSEEWKLLDACINP 252
           A W+YD+ P E SEEWKLLDACINP
Sbjct: 370 ARWEYDHKPEEGSEEWKLLDACINP 394


>ref|XP_004147728.1| PREDICTED: coproporphyrinogen-III oxidase, chloroplastic-like
           [Cucumis sativus]
          Length = 398

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/85 (44%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = +1

Query: 1   QDIRRGRYVEFNLVESLSLSLALCV*WLDILYM*RFMIMALNLDWR*EVELRVFLSLP-R 177
           Q +RRGRYVEFNLV                    R     L    R E    + +SLP  
Sbjct: 331 QQLRRGRYVEFNLVYD------------------RGTTFGLKTGGRIE---SILVSLPLT 369

Query: 178 ADWKYDY*PMERSEEWKLLDACINP 252
           A W+YD+ P E SEEWKLLDACINP
Sbjct: 370 ARWEYDHKPEEGSEEWKLLDACINP 394


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