BLASTX nr result

ID: Coptis24_contig00014763 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014763
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306649.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
ref|XP_002520329.1| cyclin A, putative [Ricinus communis] gi|223...   169   3e-40
dbj|BAE06271.1| cyclin A [Scutellaria baicalensis]                    167   6e-40
emb|CBI18982.3| unnamed protein product [Vitis vinifera]              167   8e-40
ref|XP_002284567.1| PREDICTED: cyclin-A1-1-like [Vitis vinifera]      167   8e-40

>ref|XP_002306649.1| predicted protein [Populus trichocarpa] gi|222856098|gb|EEE93645.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  171 bits (432), Expect = 7e-41
 Identities = 81/97 (83%), Positives = 89/97 (91%)
 Frame = +1

Query: 10  EVETSDKFVDLDSNLNDPQLCATIACDIYRHLRASENKKRPSMDFMDGVQKDINASMRAI 189
           ++ET DK V++D N  DPQLCATIACDIY+HLRASE KKRPS DFM+ +QKDINASMRAI
Sbjct: 202 DMETDDKIVNVDDNYQDPQLCATIACDIYKHLRASEMKKRPSTDFMERIQKDINASMRAI 261

Query: 190 LVDWLVEVSEEYRLVPDTLYLTVNYIDRYLSGNVMNR 300
           LVDWLVEV+EEYRLVPDTLYLTVNYIDRYLSGNVMNR
Sbjct: 262 LVDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNR 298


>ref|XP_002520329.1| cyclin A, putative [Ricinus communis] gi|223540548|gb|EEF42115.1|
           cyclin A, putative [Ricinus communis]
          Length = 498

 Score =  169 bits (427), Expect = 3e-40
 Identities = 78/97 (80%), Positives = 89/97 (91%)
 Frame = +1

Query: 10  EVETSDKFVDLDSNLNDPQLCATIACDIYRHLRASENKKRPSMDFMDGVQKDINASMRAI 189
           +++T DK V+LD N  DPQLCAT+ACDIY+HLRASE KKRPS DFM+ +QKDIN+SMRAI
Sbjct: 207 DMDTDDKIVNLDDNYEDPQLCATMACDIYKHLRASETKKRPSTDFMERIQKDINSSMRAI 266

Query: 190 LVDWLVEVSEEYRLVPDTLYLTVNYIDRYLSGNVMNR 300
           L+DWLVEV+EEYRLVPDTLYLTVNYIDRYLSGNVMNR
Sbjct: 267 LIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNR 303


>dbj|BAE06271.1| cyclin A [Scutellaria baicalensis]
          Length = 496

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/96 (82%), Positives = 90/96 (93%)
 Frame = +1

Query: 13  VETSDKFVDLDSNLNDPQLCATIACDIYRHLRASENKKRPSMDFMDGVQKDINASMRAIL 192
           +E+ DK VD+D NL+DPQLCATIACDIY+HLRASE KKRP+ +FM+ VQKDINASMRAIL
Sbjct: 206 LESGDKIVDVDENLDDPQLCATIACDIYKHLRASEAKKRPATNFMERVQKDINASMRAIL 265

Query: 193 VDWLVEVSEEYRLVPDTLYLTVNYIDRYLSGNVMNR 300
           +DWLVEV+EEYRLVPDTLYLTVNYIDRYLSGNVM+R
Sbjct: 266 IDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMDR 301


>emb|CBI18982.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  167 bits (423), Expect = 8e-40
 Identities = 75/100 (75%), Positives = 89/100 (89%)
 Frame = +1

Query: 1   LHMEVETSDKFVDLDSNLNDPQLCATIACDIYRHLRASENKKRPSMDFMDGVQKDINASM 180
           +H+E ET+ K  D+D N  DPQ CAT+ACDIY+HLRASE +KRPS DFM+ +QKD+NASM
Sbjct: 256 IHVETETNGKIADIDDNFGDPQFCATMACDIYKHLRASEARKRPSTDFMERIQKDVNASM 315

Query: 181 RAILVDWLVEVSEEYRLVPDTLYLTVNYIDRYLSGNVMNR 300
           R+IL+DWLVEV+EEYRLVPDTLYLTVN+IDRYLSGNVMNR
Sbjct: 316 RSILIDWLVEVAEEYRLVPDTLYLTVNFIDRYLSGNVMNR 355


>ref|XP_002284567.1| PREDICTED: cyclin-A1-1-like [Vitis vinifera]
          Length = 495

 Score =  167 bits (423), Expect = 8e-40
 Identities = 75/100 (75%), Positives = 89/100 (89%)
 Frame = +1

Query: 1   LHMEVETSDKFVDLDSNLNDPQLCATIACDIYRHLRASENKKRPSMDFMDGVQKDINASM 180
           +H+E ET+ K  D+D N  DPQ CAT+ACDIY+HLRASE +KRPS DFM+ +QKD+NASM
Sbjct: 201 IHVETETNGKIADIDDNFGDPQFCATMACDIYKHLRASEARKRPSTDFMERIQKDVNASM 260

Query: 181 RAILVDWLVEVSEEYRLVPDTLYLTVNYIDRYLSGNVMNR 300
           R+IL+DWLVEV+EEYRLVPDTLYLTVN+IDRYLSGNVMNR
Sbjct: 261 RSILIDWLVEVAEEYRLVPDTLYLTVNFIDRYLSGNVMNR 300


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