BLASTX nr result

ID: Coptis24_contig00014755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014755
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271020.2| PREDICTED: uncharacterized protein LOC100260...   336   9e-90
emb|CAN80760.1| hypothetical protein VITISV_014603 [Vitis vinifera]   329   1e-87
ref|XP_002303025.1| predicted protein [Populus trichocarpa] gi|2...   305   2e-80
ref|XP_003624244.1| Hydroxyproline-rich glycoprotein-like protei...   301   3e-79
ref|XP_002527287.1| chitinase, putative [Ricinus communis] gi|22...   298   2e-78

>ref|XP_002271020.2| PREDICTED: uncharacterized protein LOC100260014 [Vitis vinifera]
            gi|302144208|emb|CBI23335.3| unnamed protein product
            [Vitis vinifera]
          Length = 355

 Score =  336 bits (861), Expect = 9e-90
 Identities = 172/261 (65%), Positives = 205/261 (78%), Gaps = 8/261 (3%)
 Frame = +2

Query: 284  APFPCFATETTFANEQISDRIDLEAILVSIDDFFNRNPFFVSGVTFIWLVVIPLTQEYLR 463
            AP PCFA+ET  +    +D+I+LE+I+VSIDDFFNRNPFFV+GVTFIWLVV+PLTQEYL+
Sbjct: 86   APLPCFASETVVS---ANDKINLESIVVSIDDFFNRNPFFVAGVTFIWLVVVPLTQEYLK 142

Query: 464  KYKFVSAIDAFQKLKSDPNSQLLDIRDKASLNYLGTPNLKILNKKAVQVEFLEGQEDGFV 643
            K+KF+SAI+AF+KL+ DPN+QLLDIRD  SL YLG+PNLKILNK  VQV+F +  ED F+
Sbjct: 143  KFKFISAINAFRKLRDDPNAQLLDIRDGKSLAYLGSPNLKILNKGVVQVQFSQDDEDAFL 202

Query: 644  KKVLQNFKDPGNTIICILDNFDGNSMKVAELLFKNGFKEAYAIRGGLRGKKGWQSIQETL 823
            K V   F DP NT +C+LDNFDGNSMKVAELLFKNGFKEAYAIRGG+RGK GWQ+IQE L
Sbjct: 203  KVVSTKFADPNNTTVCVLDNFDGNSMKVAELLFKNGFKEAYAIRGGIRGKNGWQAIQENL 262

Query: 824  LPPSVHVFPKKG-KASRQLEKKEGTDLQTNPNGQ------VPVNKDEIVENGYINKDGPS 982
            LPPSVH++PKK  K SRQ E   G  ++   N +      VP++  E V+NGY+ K   S
Sbjct: 263  LPPSVHIYPKKKVKMSRQPEVNGGIIIEGEDNSKASSSASVPLDSSETVDNGYVKKPIKS 322

Query: 983  -PQATLGSSRSLSPYPNYPDL 1042
             PQA LG SRS SPYPNYPDL
Sbjct: 323  TPQAKLG-SRSSSPYPNYPDL 342


>emb|CAN80760.1| hypothetical protein VITISV_014603 [Vitis vinifera]
          Length = 636

 Score =  329 bits (843), Expect = 1e-87
 Identities = 183/328 (55%), Positives = 222/328 (67%), Gaps = 8/328 (2%)
 Frame = +2

Query: 71   LKPNSISNATFLTSQKPLLFKPHSNFTQHHFSILNTTSSRKTTCIHCSIPFKNHKETSFL 250
            L PNSI      T+  P+          +H  I  T+S   +       P K  K    L
Sbjct: 28   LVPNSIPINKPTTAHPPV----------NHLLIFKTSSPSPSPAFLSQFPLKPDKIPHLL 77

Query: 251  KFTMALITAFCAPFPCFATETTFANEQISDRIDLEAILVSIDDFFNRNPFFVSGVTFIWL 430
                 L  +   P PCFA+ET  +    +D+I+LE+I+VSIDDFFNRNPFFV+GVTFIWL
Sbjct: 78   -----LGLSSFTPLPCFASETVVS---ANDKINLESIVVSIDDFFNRNPFFVAGVTFIWL 129

Query: 431  VVIPLTQEYLRKYKFVSAIDAFQKLKSDPNSQLLDIRDKASLNYLGTPNLKILNKKAVQV 610
            VV+PLTQEYL+K+KF+SAI+AF+KL+ DPN+QLLDIRD  SL YLG+PNLKILNK  VQV
Sbjct: 130  VVVPLTQEYLKKFKFISAINAFRKLRDDPNAQLLDIRDGKSLAYLGSPNLKILNKGVVQV 189

Query: 611  EFLEGQEDGFVKKVLQNFKDPGNTIICILDNFDGNSMKVAELLFKNGFKEAYAIRGGLRG 790
            +F +  ED F+K V   F DP NT +C+LDNFDGNSMKVAELLFKNGFKEAYAIRGG+RG
Sbjct: 190  QFSQDDEDAFLKSVSTKFADPKNTTVCVLDNFDGNSMKVAELLFKNGFKEAYAIRGGIRG 249

Query: 791  KKGWQSIQETLLPPSVHVFPKKG-KASRQLEKKEGTDLQTNPNGQ------VPVNKDEIV 949
            K GWQ+IQE LLPPSVH++PKK  K SRQ E   G  ++   N +      VP++  E V
Sbjct: 250  KNGWQAIQENLLPPSVHIYPKKKVKMSRQPEVNGGIIIEGEDNSKASSSASVPLDSSETV 309

Query: 950  ENGYINKDGPS-PQATLGSSRSLSPYPN 1030
            +NGY+ K   S PQA LG SRS SPYPN
Sbjct: 310  DNGYVKKPIKSTPQAKLG-SRSSSPYPN 336


>ref|XP_002303025.1| predicted protein [Populus trichocarpa] gi|222844751|gb|EEE82298.1|
            predicted protein [Populus trichocarpa]
          Length = 327

 Score =  305 bits (780), Expect = 2e-80
 Identities = 181/350 (51%), Positives = 231/350 (66%), Gaps = 14/350 (4%)
 Frame = +2

Query: 20   MEISSLGFSSLPLIHNCLKPNSISNATFLTSQKPLLFKPHSNFTQHHFSILNTTSSRKTT 199
            ME  S+  SS P I N   P ++  AT          K +S+ ++  FS        K +
Sbjct: 4    MESLSILLSSSPPIQN--NPKTLKPATNS--------KANSHLSKFTFS--------KES 45

Query: 200  CIHCSIPFKNHKETSFLKFTMALITAFCAPFPCFATET-TFANEQISDRIDLEAILVSID 376
             +   +   ++K T+F   T+ L T+     PC A+ET T   EQ+SD+I+LE+ILVSID
Sbjct: 46   SLQNPLSLVSNK-TTFSFTTIQLFTSL----PCLASETLTSQTEQVSDKINLESILVSID 100

Query: 377  DFFNRNPFFVSGVTFIWLVVIPLTQEYLRKYKFVSAIDAFQKLKSDPNSQLLDIRDKASL 556
            DFFN+NPFFV+G TFIWLVVIPLT+EYLRKYKFVSAIDAF+KL+ +P++QLLDIRD+ S+
Sbjct: 101  DFFNKNPFFVAGCTFIWLVVIPLTEEYLRKYKFVSAIDAFRKLRDNPDAQLLDIRDRRSV 160

Query: 557  NYLGTPNLKILNKKAVQVEFLEGQEDGFVKKVLQNFKDPGNTIICILDNFDGNSMKVAEL 736
              LG+PNLK+ +K  VQVEF EG E GFVK VL+NF+DP NT +CILDNFDG+SM+VAEL
Sbjct: 161  IALGSPNLKMFDKSVVQVEFPEGDEGGFVKNVLKNFQDPANTSLCILDNFDGDSMRVAEL 220

Query: 737  LFKNGFKEAYAIRGGLRGKKGWQSIQETLLPPSVHVFPKK-------------GKASRQL 877
            LFKNGFKEAYAIRGG+RGKKGW  IQETLLPPSVH+ PKK             G  ++Q 
Sbjct: 221  LFKNGFKEAYAIRGGVRGKKGWLEIQETLLPPSVHMKPKKKKKKAKVSQLGVNGGVAQQN 280

Query: 878  EKKEGTDLQTNPNGQVPVNKDEIVENGYINKDGPSPQATLGSSRSLSPYP 1027
            + ++G    T+     P+   + V+NG+INK   S        R  SPYP
Sbjct: 281  DGEDGIPSSTS----FPLEGSQSVDNGHINKPMTSTPHVEIDFR--SPYP 324


>ref|XP_003624244.1| Hydroxyproline-rich glycoprotein-like protein [Medicago truncatula]
            gi|355499259|gb|AES80462.1| Hydroxyproline-rich
            glycoprotein-like protein [Medicago truncatula]
          Length = 355

 Score =  301 bits (770), Expect = 3e-79
 Identities = 168/341 (49%), Positives = 222/341 (65%), Gaps = 13/341 (3%)
 Frame = +2

Query: 59   IHNCLKPNSISNATFLTSQKPLLFKPH----SNFTQHHFSILNTTSSRKTTCIHCSIPFK 226
            +H    P   +   F T    LL  P+    S+F Q HF+       +K +  H  IP +
Sbjct: 13   LHLSYPPFPKTQKLFTTKPFSLLSNPNPLHSSSFPQPHFN-------KKISISHSPIPLQ 65

Query: 227  NHKETSFLKFTMALITAFCAPFPCFATETTFANEQISDRIDLEAILVSIDDFFNRNPFFV 406
            N  + S   F+ ++I  F  PF   A E     E  + RI+LE+ILVSIDDFFNR PFFV
Sbjct: 66   NLFKKS--TFSFSIINLF-TPFQSLAVEAPTLTESDAGRINLESILVSIDDFFNRYPFFV 122

Query: 407  SGVTFIWLVVIPLTQEYLRKYKFVSAIDAFQKLKSDPNSQLLDIRDKASLNYLGTPNLKI 586
            +G +FI+LV IPL +EY RKYKFVSAIDAF+KL+ + +SQLLDIRD+ ++ +LG+P+LK+
Sbjct: 123  AGCSFIYLVAIPLAEEYFRKYKFVSAIDAFRKLRDEADSQLLDIRDRKNVKFLGSPSLKM 182

Query: 587  LNKKAVQVEFLEGQEDGFVKKVLQNFKDPGNTIICILDNFDGNSMKVAELLFKNGFKEAY 766
            +NK+ VQ EF+EG EDGFVKKVL+ FKD  NT + +LD+FDGNSMKVAELLFKNGFKEAY
Sbjct: 183  VNKEVVQFEFVEGNEDGFVKKVLERFKDASNTAVFVLDSFDGNSMKVAELLFKNGFKEAY 242

Query: 767  AIRGGLRGKKGWQSIQETLLPPSVHV-FPKKGKASRQLEKKEGTDLQTNPN-------GQ 922
            AI+GG+RG++GW +IQ+TLLPPSVH+   KK K  ++L       +Q + N         
Sbjct: 243  AIKGGVRGQQGWMAIQDTLLPPSVHINRRKKTKVPKELNTNGNGAIQQSDNKNESLVSSD 302

Query: 923  VPVNKDEIVENGYINKDGPS-PQATLGSSRSLSPYPNYPDL 1042
             P   ++  EN ++ K   S P+  + S  S SPYPNYPDL
Sbjct: 303  TPAVGNQETENDHVKKSVESNPEMKISSVVSSSPYPNYPDL 343


>ref|XP_002527287.1| chitinase, putative [Ricinus communis] gi|223533380|gb|EEF35131.1|
           chitinase, putative [Ricinus communis]
          Length = 315

 Score =  298 bits (764), Expect = 2e-78
 Identities = 174/305 (57%), Positives = 208/305 (68%), Gaps = 13/305 (4%)
 Frame = +2

Query: 20  MEISSLGFSSLPLIHNCLKPNSISNATF-LTSQKPLLFKPHSNFTQHHFSILNTTSSRKT 196
           ME  S+ FSS P I N   P +    T+ L S +  L  P +   Q+H S L  +   KT
Sbjct: 4   MESLSIIFSSSPPIQN--HPKTFEFPTYKLNSHQNNLPLPKTLSLQNHLSQLKNSLLTKT 61

Query: 197 TCIHCSIPFKNHKETSFLKFTMALITAFCAPFPCFATET-TFANEQISDRIDLEAILVSI 373
                S+ F           T+ L+T+     P  A+ET T   EQ+SD+I LE+ILVSI
Sbjct: 62  -----SVSFT----------TIQLLTSL----PSLASETLTSQAEQVSDKISLESILVSI 102

Query: 374 DDFFNRNPFFVSGVTFIWLVVIPLTQEYLRKYKFVSAIDAFQKLKSDPNSQLLDIRDKAS 553
           DDF NRNPFFV+G TFIWLVVIPLTQ YLRKYKF+SAI+AF+KLK D ++QLLDIRDK S
Sbjct: 103 DDFNNRNPFFVAGCTFIWLVVIPLTQRYLRKYKFISAINAFRKLKEDKDAQLLDIRDKKS 162

Query: 554 LNYLGTPNLKILNKKAVQVEFLEGQEDGFVKKVLQNFKDPGNTIICILDNFDGNSMKVAE 733
           +  LG+PNLKIL+K  VQV F E  EDGFVK VL+ F DP NT +CILDNFDGNS++VAE
Sbjct: 163 VKALGSPNLKILDKSVVQVMFSEEDEDGFVKNVLEKFPDPANTTMCILDNFDGNSIRVAE 222

Query: 734 LLFKNGFKEAYAIRGGLRGKKGWQSIQETLLPPSVHVFPKKGKA-----------SRQLE 880
           LL KNGFKEAYAI+GG+RGKKGW  IQETLLPPSVH++PKK KA           SRQ+E
Sbjct: 223 LLVKNGFKEAYAIKGGVRGKKGWLEIQETLLPPSVHMYPKKKKAKILQLGINGGVSRQME 282

Query: 881 KKEGT 895
           +K GT
Sbjct: 283 EKNGT 287


Top