BLASTX nr result

ID: Coptis24_contig00014748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014748
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267126.1| PREDICTED: uncharacterized protein LOC100243...   230   2e-58
ref|XP_002317210.1| predicted protein [Populus trichocarpa] gi|2...   223   2e-56
ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinu...   223   3e-56
ref|XP_002888069.1| OST3/OST6 family protein [Arabidopsis lyrata...   215   5e-54
ref|NP_176372.1| OST3 and OST6 domain-containing protein [Arabid...   214   9e-54

>ref|XP_002267126.1| PREDICTED: uncharacterized protein LOC100243455 [Vitis vinifera]
           gi|147770840|emb|CAN74174.1| hypothetical protein
           VITISV_019222 [Vitis vinifera]
          Length = 339

 Score =  230 bits (586), Expect = 2e-58
 Identities = 115/185 (62%), Positives = 150/185 (81%), Gaps = 3/185 (1%)
 Frame = -1

Query: 546 SDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTKS---RSYSILIFFDATQLHDKTELHL 376
           ++SD V ELL L+S+SKSG+IHL+D SLSRFLT +   R YSILIFFDATQLHDK EL+L
Sbjct: 23  AESDRVAELLSLQSRSKSGVIHLDDHSLSRFLTSTTTPRPYSILIFFDATQLHDKPELNL 82

Query: 375 KDLRFEYELVATAFSNNNKNTHDETKLFFCDIEFKESQNSFALFGVNALPHIRHVGPRVM 196
           + LR E+ L+A++F +NNK++   +KLFFCDIEFKESQ+SFA FG+ +LPHIR VGP V 
Sbjct: 83  QGLRSEFGLLASSFISNNKDSPSASKLFFCDIEFKESQSSFAQFGITSLPHIRLVGPDVK 142

Query: 195 NLKDSEAMEQGDFARMAESMSEFVESKTGLTVGPVQRPPFMSRKQIGVIVIGVLLSTPFF 16
           +LKDSE MEQGD +RMA+SMS+FVES+T L+VGP++RPP  S+KQ+G  V   L+  PF 
Sbjct: 143 SLKDSEQMEQGDISRMADSMSDFVESRTKLSVGPIKRPPMFSKKQLGFFVAAFLVWAPFV 202

Query: 15  IKRIM 1
           +K+++
Sbjct: 203 VKKVL 207


>ref|XP_002317210.1| predicted protein [Populus trichocarpa] gi|222860275|gb|EEE97822.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  223 bits (569), Expect = 2e-56
 Identities = 113/182 (62%), Positives = 144/182 (79%), Gaps = 3/182 (1%)
 Frame = -1

Query: 537 DLVQELLHLKSQSKSGIIHLNDISLSRFLTKS---RSYSILIFFDATQLHDKTELHLKDL 367
           DLV ELL+L+SQSKSG+IHLND  +SRFLT +   R Y++LIFFDA  LH KTELHL+DL
Sbjct: 1   DLVTELLYLRSQSKSGVIHLNDHIVSRFLTSTKTPRPYTLLIFFDAKHLHSKTELHLQDL 60

Query: 366 RFEYELVATAFSNNNKNTHDETKLFFCDIEFKESQNSFALFGVNALPHIRHVGPRVMNLK 187
             E+ L++++F +NN +    + LFFCD+EFKESQNSFALFGVN+LPHIR VGP V N K
Sbjct: 61  HTEFSLLSSSFISNN-DASSASSLFFCDVEFKESQNSFALFGVNSLPHIRLVGPNVKNPK 119

Query: 186 DSEAMEQGDFARMAESMSEFVESKTGLTVGPVQRPPFMSRKQIGVIVIGVLLSTPFFIKR 7
           DSE M+QGDF+RMAESM+EFVES+T LTVGP+ RPP +S  QI  + + +L+   FFIK+
Sbjct: 120 DSEQMDQGDFSRMAESMAEFVESRTKLTVGPINRPPMLSTNQIAFLGVILLIWAFFFIKK 179

Query: 6   IM 1
           ++
Sbjct: 180 LL 181


>ref|XP_002518526.1| Tumor suppressor candidate, putative [Ricinus communis]
           gi|223542371|gb|EEF43913.1| Tumor suppressor candidate,
           putative [Ricinus communis]
          Length = 349

 Score =  223 bits (568), Expect = 3e-56
 Identities = 113/190 (59%), Positives = 147/190 (77%), Gaps = 5/190 (2%)
 Frame = -1

Query: 555 STESDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTKS---RSYSILIFFDATQLHDKTE 385
           S     DLV ELL L+SQS +G+IHLND S+SRFLT +   R YS+LIFFDA QLH+K E
Sbjct: 28  SASDPQDLVTELLSLQSQSSTGVIHLNDHSISRFLTSTKTPRPYSLLIFFDAKQLHEKAE 87

Query: 384 LHLKDLRFEYELVATAFSNNNKNTHDET--KLFFCDIEFKESQNSFALFGVNALPHIRHV 211
           LHL+DL  E+ LVA++F NNN +    +  KLFFCDIEFKESQ++F+LFGVN+LPHIR V
Sbjct: 88  LHLQDLHHEFSLVASSFINNNADQSSASYGKLFFCDIEFKESQSTFSLFGVNSLPHIRLV 147

Query: 210 GPRVMNLKDSEAMEQGDFARMAESMSEFVESKTGLTVGPVQRPPFMSRKQIGVIVIGVLL 31
            P V N KDS+AM+QGDF+RMAESMS+F+ES+T L+VGP+ RPP +SR Q+   ++ +L+
Sbjct: 148 NPNVKNPKDSDAMDQGDFSRMAESMSDFIESRTKLSVGPIHRPPPISRNQMISAIVCLLI 207

Query: 30  STPFFIKRIM 1
             PF IK+++
Sbjct: 208 WMPFMIKKLL 217


>ref|XP_002888069.1| OST3/OST6 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333910|gb|EFH64328.1| OST3/OST6 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  215 bits (548), Expect = 5e-54
 Identities = 108/188 (57%), Positives = 148/188 (78%), Gaps = 4/188 (2%)
 Frame = -1

Query: 552 TESDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTKS---RSYSILIFFDATQLHDKTEL 382
           ++SDSDL+ EL+ L+S S+SG+IHL+D  +S+FLT +   R YS+L+FFDATQLH K EL
Sbjct: 28  SDSDSDLLNELVSLRSTSESGVIHLDDHGISKFLTSASTPRPYSLLVFFDATQLHSKNEL 87

Query: 381 HLKDLRFEYELVATAFSNNNKNTHDETKLFFCDIEFKESQNSFALFGVNALPHIRHVGPR 202
            L++LR E+ +V+ +F  NN N  + TKLFFC+IEF +SQ+SF LFGVNALPHIR V P 
Sbjct: 88  RLQELRREFGIVSASFLANN-NGSEGTKLFFCEIEFSQSQSSFQLFGVNALPHIRLVSPS 146

Query: 201 VMNLKD-SEAMEQGDFARMAESMSEFVESKTGLTVGPVQRPPFMSRKQIGVIVIGVLLST 25
           + NL+D S  M+Q D++R+AESM+EFVE +T L VGP+QRPP +S+ QIGVIV  ++++T
Sbjct: 147 ISNLRDESGQMDQSDYSRLAESMAEFVEQRTKLKVGPIQRPPLLSKPQIGVIVALIVIAT 206

Query: 24  PFFIKRIM 1
           PF IKR++
Sbjct: 207 PFIIKRVL 214


>ref|NP_176372.1| OST3 and OST6 domain-containing protein [Arabidopsis thaliana]
           gi|75213403|sp|Q9SYB5.1|OST3B_ARATH RecName:
           Full=Probable dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit 3B; Flags: Precursor
           gi|4508079|gb|AAD21423.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332195765|gb|AEE33886.1| OST3
           and OST6 domain-containing protein [Arabidopsis
           thaliana]
          Length = 346

 Score =  214 bits (546), Expect = 9e-54
 Identities = 107/188 (56%), Positives = 148/188 (78%), Gaps = 4/188 (2%)
 Frame = -1

Query: 552 TESDSDLVQELLHLKSQSKSGIIHLNDISLSRFLTKS---RSYSILIFFDATQLHDKTEL 382
           ++SDSDL+ EL+ L+S S+SG+IHL+D  +S+FLT +   R YS+L+FFDATQLH K EL
Sbjct: 28  SDSDSDLLNELVSLRSTSESGVIHLDDHGISKFLTSASTPRPYSLLVFFDATQLHSKNEL 87

Query: 381 HLKDLRFEYELVATAFSNNNKNTHDETKLFFCDIEFKESQNSFALFGVNALPHIRHVGPR 202
            L++LR E+ +V+ +F  NN N  + TKLFFC+IEF +SQ+SF LFGVNALPHIR V P 
Sbjct: 88  RLQELRREFGIVSASFLANN-NGSEGTKLFFCEIEFSKSQSSFQLFGVNALPHIRLVSPS 146

Query: 201 VMNLKD-SEAMEQGDFARMAESMSEFVESKTGLTVGPVQRPPFMSRKQIGVIVIGVLLST 25
           + NL+D S  M+Q D++R+AESM+EFVE +T L VGP+QRPP +S+ QIG+IV  ++++T
Sbjct: 147 ISNLRDESGQMDQSDYSRLAESMAEFVEQRTKLKVGPIQRPPLLSKPQIGIIVALIVIAT 206

Query: 24  PFFIKRIM 1
           PF IKR++
Sbjct: 207 PFIIKRVL 214


Top