BLASTX nr result
ID: Coptis24_contig00014747
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014747 (414 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241... 193 1e-47 emb|CBI16215.3| unnamed protein product [Vitis vinifera] 193 1e-47 ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|2... 174 9e-42 ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thali... 171 4e-41 dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana] 171 4e-41 >ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241609 [Vitis vinifera] Length = 694 Score = 193 bits (491), Expect = 1e-47 Identities = 98/137 (71%), Positives = 116/137 (84%) Frame = +2 Query: 2 GIAYNHSIKATAVSDSDSCSISLAPLSSILTLSPNLFASVKFHRDLLRVPLDTPFRQYTR 181 G+AYN IK +SDSDSCSI LSS+L L+P+L +SV+FHR LL VPL +PFRQYTR Sbjct: 36 GVAYNRKIKGV-MSDSDSCSIPPLSLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTR 94 Query: 182 LTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVVDLIAIDFSEKLPFR 361 LTV+VDS QA++LNSGNPVLKSYDLVAV+PLNQ+ FD C+V+ VDLIAIDFSEKLPFR Sbjct: 95 LTVAVDSSPQASALNSGNPVLKSYDLVAVRPLNQNAFDQACQVSEVDLIAIDFSEKLPFR 154 Query: 362 LNLPIVKAAMKRGIYFE 412 L LP+VKAA+KRG+YFE Sbjct: 155 LKLPMVKAAIKRGVYFE 171 >emb|CBI16215.3| unnamed protein product [Vitis vinifera] Length = 667 Score = 193 bits (491), Expect = 1e-47 Identities = 98/137 (71%), Positives = 116/137 (84%) Frame = +2 Query: 2 GIAYNHSIKATAVSDSDSCSISLAPLSSILTLSPNLFASVKFHRDLLRVPLDTPFRQYTR 181 G+AYN IK +SDSDSCSI LSS+L L+P+L +SV+FHR LL VPL +PFRQYTR Sbjct: 36 GVAYNRKIKGV-MSDSDSCSIPPLSLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTR 94 Query: 182 LTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVVDLIAIDFSEKLPFR 361 LTV+VDS QA++LNSGNPVLKSYDLVAV+PLNQ+ FD C+V+ VDLIAIDFSEKLPFR Sbjct: 95 LTVAVDSSPQASALNSGNPVLKSYDLVAVRPLNQNAFDQACQVSEVDLIAIDFSEKLPFR 154 Query: 362 LNLPIVKAAMKRGIYFE 412 L LP+VKAA+KRG+YFE Sbjct: 155 LKLPMVKAAIKRGVYFE 171 >ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|222850616|gb|EEE88163.1| predicted protein [Populus trichocarpa] Length = 324 Score = 174 bits (440), Expect = 9e-42 Identities = 90/137 (65%), Positives = 106/137 (77%) Frame = +2 Query: 2 GIAYNHSIKATAVSDSDSCSISLAPLSSILTLSPNLFASVKFHRDLLRVPLDTPFRQYTR 181 GIAYN SIK +SD D C+I L LSS+L ++P L SV HRDLL +P +PFRQYTR Sbjct: 30 GIAYNRSIKGI-MSDHDRCTIPLLSLSSLLDVAPALAFSVNLHRDLLGIPRSSPFRQYTR 88 Query: 182 LTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVVDLIAIDFSEKLPFR 361 LTVSVD+ QA LNSGNPVLK+YD VAVKPL+Q FDH C + VD+IAIDFS KLPFR Sbjct: 89 LTVSVDTPSQAQVLNSGNPVLKTYDFVAVKPLSQTAFDHACLKSEVDMIAIDFSVKLPFR 148 Query: 362 LNLPIVKAAMKRGIYFE 412 L LP+VKAA++RG+YFE Sbjct: 149 LKLPMVKAAIERGVYFE 165 >ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thaliana] gi|332009878|gb|AED97261.1| ribonuclease P subunit Rpp30 [Arabidopsis thaliana] Length = 581 Score = 171 bits (434), Expect = 4e-41 Identities = 85/137 (62%), Positives = 109/137 (79%) Frame = +2 Query: 2 GIAYNHSIKATAVSDSDSCSISLAPLSSILTLSPNLFASVKFHRDLLRVPLDTPFRQYTR 181 GIA+N SIK +SD DSC+I L L S++ ++P L +SV FHRDLL VP TPFRQYTR Sbjct: 42 GIAHNRSIKGV-MSDKDSCTIPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTR 100 Query: 182 LTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVVDLIAIDFSEKLPFR 361 LTV V+S Q SLNSGNP+LKSYD++AV+P+NQ+ FD+ C+ A VDLI+IDF++K+ FR Sbjct: 101 LTVHVESNAQCQSLNSGNPILKSYDIIAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFR 160 Query: 362 LNLPIVKAAMKRGIYFE 412 L P+VKAA++RGIYFE Sbjct: 161 LKHPMVKAAIQRGIYFE 177 >dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana] Length = 680 Score = 171 bits (434), Expect = 4e-41 Identities = 85/137 (62%), Positives = 109/137 (79%) Frame = +2 Query: 2 GIAYNHSIKATAVSDSDSCSISLAPLSSILTLSPNLFASVKFHRDLLRVPLDTPFRQYTR 181 GIA+N SIK +SD DSC+I L L S++ ++P L +SV FHRDLL VP TPFRQYTR Sbjct: 42 GIAHNRSIKGV-MSDKDSCTIPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTR 100 Query: 182 LTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVVDLIAIDFSEKLPFR 361 LTV V+S Q SLNSGNP+LKSYD++AV+P+NQ+ FD+ C+ A VDLI+IDF++K+ FR Sbjct: 101 LTVHVESNAQCQSLNSGNPILKSYDIIAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFR 160 Query: 362 LNLPIVKAAMKRGIYFE 412 L P+VKAA++RGIYFE Sbjct: 161 LKHPMVKAAIQRGIYFE 177