BLASTX nr result

ID: Coptis24_contig00014747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014747
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241...   193   1e-47
emb|CBI16215.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|2...   174   9e-42
ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thali...   171   4e-41
dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana]        171   4e-41

>ref|XP_002281631.2| PREDICTED: uncharacterized protein LOC100241609 [Vitis vinifera]
          Length = 694

 Score =  193 bits (491), Expect = 1e-47
 Identities = 98/137 (71%), Positives = 116/137 (84%)
 Frame = +2

Query: 2   GIAYNHSIKATAVSDSDSCSISLAPLSSILTLSPNLFASVKFHRDLLRVPLDTPFRQYTR 181
           G+AYN  IK   +SDSDSCSI    LSS+L L+P+L +SV+FHR LL VPL +PFRQYTR
Sbjct: 36  GVAYNRKIKGV-MSDSDSCSIPPLSLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTR 94

Query: 182 LTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVVDLIAIDFSEKLPFR 361
           LTV+VDS  QA++LNSGNPVLKSYDLVAV+PLNQ+ FD  C+V+ VDLIAIDFSEKLPFR
Sbjct: 95  LTVAVDSSPQASALNSGNPVLKSYDLVAVRPLNQNAFDQACQVSEVDLIAIDFSEKLPFR 154

Query: 362 LNLPIVKAAMKRGIYFE 412
           L LP+VKAA+KRG+YFE
Sbjct: 155 LKLPMVKAAIKRGVYFE 171


>emb|CBI16215.3| unnamed protein product [Vitis vinifera]
          Length = 667

 Score =  193 bits (491), Expect = 1e-47
 Identities = 98/137 (71%), Positives = 116/137 (84%)
 Frame = +2

Query: 2   GIAYNHSIKATAVSDSDSCSISLAPLSSILTLSPNLFASVKFHRDLLRVPLDTPFRQYTR 181
           G+AYN  IK   +SDSDSCSI    LSS+L L+P+L +SV+FHR LL VPL +PFRQYTR
Sbjct: 36  GVAYNRKIKGV-MSDSDSCSIPPLSLSSLLKLAPSLSSSVRFHRSLLGVPLSSPFRQYTR 94

Query: 182 LTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVVDLIAIDFSEKLPFR 361
           LTV+VDS  QA++LNSGNPVLKSYDLVAV+PLNQ+ FD  C+V+ VDLIAIDFSEKLPFR
Sbjct: 95  LTVAVDSSPQASALNSGNPVLKSYDLVAVRPLNQNAFDQACQVSEVDLIAIDFSEKLPFR 154

Query: 362 LNLPIVKAAMKRGIYFE 412
           L LP+VKAA+KRG+YFE
Sbjct: 155 LKLPMVKAAIKRGVYFE 171


>ref|XP_002314208.1| predicted protein [Populus trichocarpa] gi|222850616|gb|EEE88163.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score =  174 bits (440), Expect = 9e-42
 Identities = 90/137 (65%), Positives = 106/137 (77%)
 Frame = +2

Query: 2   GIAYNHSIKATAVSDSDSCSISLAPLSSILTLSPNLFASVKFHRDLLRVPLDTPFRQYTR 181
           GIAYN SIK   +SD D C+I L  LSS+L ++P L  SV  HRDLL +P  +PFRQYTR
Sbjct: 30  GIAYNRSIKGI-MSDHDRCTIPLLSLSSLLDVAPALAFSVNLHRDLLGIPRSSPFRQYTR 88

Query: 182 LTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVVDLIAIDFSEKLPFR 361
           LTVSVD+  QA  LNSGNPVLK+YD VAVKPL+Q  FDH C  + VD+IAIDFS KLPFR
Sbjct: 89  LTVSVDTPSQAQVLNSGNPVLKTYDFVAVKPLSQTAFDHACLKSEVDMIAIDFSVKLPFR 148

Query: 362 LNLPIVKAAMKRGIYFE 412
           L LP+VKAA++RG+YFE
Sbjct: 149 LKLPMVKAAIERGVYFE 165


>ref|NP_200806.2| ribonuclease P subunit Rpp30 [Arabidopsis thaliana]
           gi|332009878|gb|AED97261.1| ribonuclease P subunit Rpp30
           [Arabidopsis thaliana]
          Length = 581

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/137 (62%), Positives = 109/137 (79%)
 Frame = +2

Query: 2   GIAYNHSIKATAVSDSDSCSISLAPLSSILTLSPNLFASVKFHRDLLRVPLDTPFRQYTR 181
           GIA+N SIK   +SD DSC+I L  L S++ ++P L +SV FHRDLL VP  TPFRQYTR
Sbjct: 42  GIAHNRSIKGV-MSDKDSCTIPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTR 100

Query: 182 LTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVVDLIAIDFSEKLPFR 361
           LTV V+S  Q  SLNSGNP+LKSYD++AV+P+NQ+ FD+ C+ A VDLI+IDF++K+ FR
Sbjct: 101 LTVHVESNAQCQSLNSGNPILKSYDIIAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFR 160

Query: 362 LNLPIVKAAMKRGIYFE 412
           L  P+VKAA++RGIYFE
Sbjct: 161 LKHPMVKAAIQRGIYFE 177


>dbj|BAB08366.1| unnamed protein product [Arabidopsis thaliana]
          Length = 680

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/137 (62%), Positives = 109/137 (79%)
 Frame = +2

Query: 2   GIAYNHSIKATAVSDSDSCSISLAPLSSILTLSPNLFASVKFHRDLLRVPLDTPFRQYTR 181
           GIA+N SIK   +SD DSC+I L  L S++ ++P L +SV FHRDLL VP  TPFRQYTR
Sbjct: 42  GIAHNRSIKGV-MSDKDSCTIPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTR 100

Query: 182 LTVSVDSLIQAASLNSGNPVLKSYDLVAVKPLNQHVFDHVCKVAVVDLIAIDFSEKLPFR 361
           LTV V+S  Q  SLNSGNP+LKSYD++AV+P+NQ+ FD+ C+ A VDLI+IDF++K+ FR
Sbjct: 101 LTVHVESNAQCQSLNSGNPILKSYDIIAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFR 160

Query: 362 LNLPIVKAAMKRGIYFE 412
           L  P+VKAA++RGIYFE
Sbjct: 161 LKHPMVKAAIQRGIYFE 177


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