BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014737
         (1926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   124   1e-25
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   117   1e-23
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...   117   1e-23
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-23
ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|2...   114   9e-23

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  124 bits (310), Expect = 1e-25
 Identities = 117/417 (28%), Positives = 173/417 (41%), Gaps = 43/417 (10%)
 Frame = +1

Query: 745  LPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPRFAETHYRWVIQNRCSPCVVLCIL 924
            LP +I  +IL R+P+  L+ Q   VC+ W  L + P+  + +     Q+   PC++L   
Sbjct: 28   LPREIAHDILSRLPITSLV-QFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCD 86

Query: 925  F--EGVFGFID---HQVFDNLDTSAPVHFLDFLDEPTFQPKLYIIGFANGLLCLSEDPLL 1089
            F       F+D   H+         P  F   +      P+  ++G  NGLLCLS+    
Sbjct: 87   FPIRNNLYFVDFAAHEEEKEKVKRIPAPFSSMM------PEFEVVGSCNGLLCLSDSL-- 138

Query: 1090 CDYPVFYYICNPITGEHITLPRPHRLEIVQL-SAFVFDSSTSEYKVIRFYHGRNGG---- 1254
              Y    YI NP TG +  LP+  +    ++ S F F+  T EYKVIR  + RNG     
Sbjct: 139  --YNDSLYIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYP 196

Query: 1255 ------------EVFTLGSSRWRRIENGVPKTIIGYPYPCGRLVNNHLHWISSV--DGSP 1392
                        ++ TLG   WR +     + +       G LVN  LHWIS    +   
Sbjct: 197  RSRRIIYPLSEVQILTLGCPEWRSLGKVSYRLV---RRASGALVNGRLHWISRPCRNKPA 253

Query: 1393 LTIIAFDLAAEEVHEIELPPIVSSGEISLDPNISISLAVIEERLCFTCERKLDDKYFEVW 1572
              +++FDL  E+  E+  P     G ++     +  L V+  R C +     +    E+W
Sbjct: 254  RRLVSFDLTDEQFREVSKP---DCGGLN---RCNYHLVVL--RGCLSAAVYCNYGRLEIW 305

Query: 1573 VMKDYGVQGSWAKVYVFNPALTGALSDT---------------LTPCLTKLLNGEFLVQY 1707
            VMK+Y V+ SW K Y     +   L                  +   L  L NGE L++Y
Sbjct: 306  VMKEYNVKESWVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEY 365

Query: 1708 GVNTLGYYDPKKETCRPI-LVEVKRWFYSVFLVGSL---FSPKNVGRLASSTQTQIS 1866
                L  YDPK    + I L     WF +V  VGSL    +P +     S T   +S
Sbjct: 366  KNRVLVSYDPKNGKFKDIELQGAPNWFQTVVHVGSLNWIDTPSDAYNQGSDTSPYVS 422


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  117 bits (293), Expect = 1e-23
 Identities = 115/405 (28%), Positives = 167/405 (41%), Gaps = 49/405 (12%)
 Frame = +1

Query: 745  LPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPRFAETHYRWVIQNRCSPCVVLCIL 924
            LP +I  +IL R+P+  L+ +   VC+ W  +A  P     +     Q    PCV+L   
Sbjct: 28   LPREIAQDILSRLPITSLV-KFKCVCRAWRAMALDPEVVNLYLSCSTQET-DPCVIL--- 82

Query: 925  FEGVFGFIDHQVFDNLDTSAPVHFLDFLDEP--------------TFQPKLYIIGFANGL 1062
                    D  + +NL      +F+DF                  +  P+  ++G  NGL
Sbjct: 83   ------HCDFPIRNNL------YFVDFAAHEEEKEKVKRIRAPFSSMMPEFEVVGSCNGL 130

Query: 1063 LCLSEDPLLCDYPVFYYICNPITGEHITLPRPHRLEIVQLS-AFVFDSSTSEYKVIRFYH 1239
            LCLS D L  D     YI NP TG +  LP+  +    ++   F F+  T+EYKVIR  +
Sbjct: 131  LCLS-DSLFNDS---LYIYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNEYKVIRIVY 186

Query: 1240 GRNGG----------------EVFTLGSSRWRRIENGVPKTIIGYPYPCGRLVNNHLHWI 1371
             RNG                 ++ TLG   WR +     + +         LVN  LHW+
Sbjct: 187  YRNGHGRYPRSRRIIYPLSQVQILTLGCPGWRSLGKVSYRLV---RRASETLVNGRLHWV 243

Query: 1372 SSV--DGSPLTIIAFDLAAEEVHEIELPPIVSSGEISLDPNISISLAVIEERLCFTCERK 1545
            S    +     +++FDL  E+  E+  P     G ++        LAV+  R C +    
Sbjct: 244  SRPCRNKPARRLVSFDLTDEQFREVPKP---DCGGLN---RCDYHLAVL--RGCLSVAVY 295

Query: 1546 LDDKYFEVWVMKDYGVQGSWAKVYVFNPALTGALSDTL---------------TPCLTKL 1680
             +    E+WVMK+Y V+ SW K Y     +   L   L                  L  L
Sbjct: 296  CNYGRLEIWVMKEYNVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVL 355

Query: 1681 LNGEFLVQYGVNTLGYYDPKKETCRPI-LVEVKRWFYSVFLVGSL 1812
             NGE L++Y    L  YDPKK   + I L    +WF +V  VGSL
Sbjct: 356  KNGEILLEYKNRALVSYDPKKGKFKDIDLQGTPKWFQTVVHVGSL 400


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
            gi|223528011|gb|EEF30092.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 410

 Score =  117 bits (292), Expect = 1e-23
 Identities = 115/408 (28%), Positives = 174/408 (42%), Gaps = 52/408 (12%)
 Frame = +1

Query: 745  LPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPRFAETHYRWVIQNRCSPCVVLCI- 921
            LP ++ L+IL R+P+  LI+    VC+ W +L +HP  A  H+  +  N   PC++L   
Sbjct: 26   LPCELALDILSRLPITHLIN-VKRVCRFWRSLVQHPLLASMHFSRIANNN-DPCLLLLCD 83

Query: 922  ------LFEGVFGFIDHQVFDNLDTSAPVHFLDFLDEPTFQPKLYIIGFANGLLCLSEDP 1083
                  L+   F  +D  + + + T  PV  +         PK  +IG  NGLL L +  
Sbjct: 84   LPIKSHLYSLHFSALDETIIETV-TRIPVPVI---------PKFLVIGSCNGLLYLLDSL 133

Query: 1084 LLCDYPVFYYICNPITGEHITLPRP------HRLEIVQLSAFVFDSSTSEYKVIRFYHGR 1245
                     YI NP T +++ LP P      HR+     + F F S+T EYKV+R  + R
Sbjct: 134  ----QQRANYIYNPFTSDYLELPEPGQVLNQHRVA----TGFGFHSTTKEYKVVRVVYYR 185

Query: 1246 NGGE------------------VFTLG--SSRWRRIENGVPKTIIGYPYPCGRLVNNHLH 1365
            N  E                  V T+G  S  WR  +      ++G P     +VN  LH
Sbjct: 186  NNKEEGTNFQKRRYSLPRSEVQVLTVGNGSLTWRS-KGETSYQLLGNPSHV--VVNGRLH 242

Query: 1366 WISSV--DGSPLTIIAFDLAAEEVHEIELPPIVSSGEISLDPNISISLAVIEERLCFTCE 1539
            W+S    + S   +I+FDLA E+  E+  P   S G           LA +   L    +
Sbjct: 243  WLSCRYRNQSLRRLISFDLADEQFREVPCPVGASFGRHCSH------LATLRGCLSGVVQ 296

Query: 1540 RKLDDKYFEVWVMKDYGVQGSWAKVYVFNPALTGALSD---------------TLTPCLT 1674
                 +   +WVMK+YGV+ SW K +     L   L                 + T  L 
Sbjct: 297  ---GFRRLYIWVMKEYGVKESWVKEFTIGVKLPRELEPYPNQSINLQEFHLPLSQTKVLC 353

Query: 1675 KLLNGEFLVQYGVNTLGYYDPKKETCRPILV--EVKRWFYSVFLVGSL 1812
             L NGE L+++   TL  YD K    + +++  ++  W  ++  VGSL
Sbjct: 354  LLNNGEILLEFRCGTLVCYDTKSGAFKELIIFQDLPEWSNAIVHVGSL 401


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  116 bits (290), Expect = 2e-23
 Identities = 110/382 (28%), Positives = 173/382 (45%), Gaps = 19/382 (4%)
 Frame = +1

Query: 742  KLPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPRFAETHYRWVIQNRCSPCVVLCI 921
            KLPS+II  IL R+P+K L+ +   V KTW +L  HP F + H +   ++  +    + +
Sbjct: 7    KLPSEIISEILSRLPVKCLV-RFKCVSKTWRSLISHPEFVKNHLKRTKEDTNANHYKIFL 65

Query: 922  LFEGVFGFIDHQVFDNLDTSAPVHFLDFLDEPTFQPK---LYIIGFANGLLCLSEDPLLC 1092
              +     ID + + + D +     L F   P   P+   + I+G  NGL+C     L+ 
Sbjct: 66   STDPHLS-IDPEAYFDADDNLLTTQLKF---PVSYPEYSYIEILGSCNGLVC----GLIH 117

Query: 1093 DYPVFYYICNPITGEHITLPRPHRLEIVQLSAFVFDSSTSEYKVIRFY--------HGRN 1248
            D P+ Y I NP T E   L  P   E      F +D    +YK++R           G N
Sbjct: 118  DNPLIY-IWNPSTRESRELAIPGSSEDDAFYGFGYDVKLDDYKIVRVSISTSTNSTDGSN 176

Query: 1249 GG---EVFTLGSSRWRRIENGVPKTIIGYPYPCGRLVNNHLHWISSVDGS---PLTIIAF 1410
                 EVFTL S+ WR I++     ++  P   G L N  LHW+   +        +++F
Sbjct: 177  SETKVEVFTLKSNIWRTIQDLRCSVLLEGP---GTLANGALHWLVRQENGGSKKCVMVSF 233

Query: 1411 DLAAEEVHEIELPPIVSSGEISLDPNISISLAVIEERLCFTCERKLDDKYFEVWVMKDYG 1590
            DL+ E+   +E+ P+   G    D +  + L V+ + LC      L     E W+MK+Y 
Sbjct: 234  DLSEEKF--LEMVPL--RGLTEDDSSWDLELKVLGDWLCLYSHYGL---ICEAWIMKEYS 286

Query: 1591 VQGSWAKVYVFN-PALTGALSDTLTPCLTKLLNGEFLVQYGVNTLGYYDPKKETCRP-IL 1764
             + SW +   FN  ++ G         +TK  NG  +       + +Y+P ++T RP I+
Sbjct: 287  SEASWTRFLRFNGESIPGGKYWFRLLWVTK--NGNVVYDLDGREVVFYNPDEDTARPFII 344

Query: 1765 VEVKRWFYSVFLVGSLFSPKNV 1830
                 WF S   + SL SP N+
Sbjct: 345  YHEGDWFESTAYIESLVSPNNI 366


>ref|XP_002298144.1| predicted protein [Populus trichocarpa] gi|222845402|gb|EEE82949.1|
            predicted protein [Populus trichocarpa]
          Length = 391

 Score =  114 bits (285), Expect = 9e-23
 Identities = 111/369 (30%), Positives = 171/369 (46%), Gaps = 21/369 (5%)
 Frame = +1

Query: 745  LPSDIILNILCRVPLKDLISQCSLVCKTWYNLARHPRFAETHYRWVIQNRCSPC------ 906
            LP++I ++IL R+P+ + ++QC  VCK+W +L   P FA  H+     +    C      
Sbjct: 24   LPAEIFVDILSRLPV-EAMTQCKSVCKSWRDLLSTPYFARLHFAKAKPSSLLFCHCSGNK 82

Query: 907  -VVLCILFEGVFGFIDHQVFDNLDTSAPVHFLDFLDEPTFQPKLYIIGFANGLLCLSEDP 1083
              + C       G       +N   S P  F   L + TF+ K  ++G +NGLLCLSE  
Sbjct: 83   TKLYCCHIHSSRG----SNINNAMVSMPTKFK--LPKNTFRGK--VVGSSNGLLCLSE-- 132

Query: 1084 LLCDYPVFYYICNPITGEHITLPRP---HRLEIVQLSAFVFDSSTSEYKV----IRFYHG 1242
             +      +YICNPITGE+I +  P       + +   F ++    + K+    +R  +G
Sbjct: 133  -IHRMKKKFYICNPITGEYIGIAGPKVDQGWHVFEPIGFFYNPQNQQCKILMPRVRVGYG 191

Query: 1243 R--NGGEVFTLGSSRWRRIE-NGVPKTIIGYPYPCGRLVNNHLHWISSVDGSPLTIIAFD 1413
                 G++FTLGS+ WR I+  G    I   P      +N  LHWIS+ D   ++  +FD
Sbjct: 192  NFPGSGQIFTLGSNSWRNIDIPGHLHLIRAVP------LNGSLHWISTRDDRHIS--SFD 243

Query: 1414 LAAEEVHEIELPPIVSSGEISLDPNISISLAVIEERLCFTCERKLDDKY--FEVWVMKDY 1587
            +  E+   I LP  V           + SLA +   LC       D++Y  F +WVMK+Y
Sbjct: 244  MENEQALSIALPDQVVMH--------TASLAGLGNFLCI-----FDNEYPEFNIWVMKEY 290

Query: 1588 GVQGSWAKVYVFNPALTGALSDTLTPCLTKLLNGEFLVQYGVNTLGYYDPKKETCRPILV 1767
            GV+ SW K Y     +  + +    P   K      L+Q    TL  YDPK +  R +  
Sbjct: 291  GVEESW-KHY----TVKRSPNSHYRPVAIKEDASILLIQ-NSETLISYDPKTKESRALYD 344

Query: 1768 EV--KRWFY 1788
            ++  +R+ Y
Sbjct: 345  QIGDRRFVY 353