BLASTX nr result

ID: Coptis24_contig00014734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014734
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33568.3| unnamed protein product [Vitis vinifera]              258   3e-66
ref|XP_002271492.1| PREDICTED: ell-associated factor Eaf isoform...   258   3e-66
ref|XP_003536631.1| PREDICTED: uncharacterized protein LOC100787...   252   2e-64
ref|XP_002271519.1| PREDICTED: ell-associated factor Eaf isoform...   252   2e-64
ref|NP_001242067.1| uncharacterized protein LOC100796208 [Glycin...   251   4e-64

>emb|CBI33568.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  258 bits (658), Expect = 3e-66
 Identities = 155/285 (54%), Positives = 181/285 (63%), Gaps = 2/285 (0%)
 Frame = +3

Query: 51  EPDTAPPPDHWYNLTLGPSFKD-NSSTKFCTLRYEFKPASIDKTQTGSLHKTKENKVTVE 227
           EP TAP  D WY+LTLG SFKD +SSTKFCTLRYEFKPASIDK Q GSLHK KEN+VTVE
Sbjct: 11  EPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLHKNKENRVTVE 70

Query: 228 FQNNQLGKPKLSFEGSSEDYKDNDAVLFFDGETFRLERLHRAVKRLRHVRLPGESAGAGA 407
           F NNQ GKPK++FEGSSEDYK+NDAVLFFDGETFRLERLHRAVKRLRHVRLPGESA A A
Sbjct: 71  FHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVRLPGESAAAAA 130

Query: 408 ACNTMCVGASSGGQGLIEPRSPVHGKGVKSQPFSKTAMHHSVPVEVERIDIGESKSSPGP 587
                   A++     +E  SP  GKG K Q F+K ++ H VPVEVERIDIG S+S  G 
Sbjct: 131 T-----TAATTSVVPPVESYSPPIGKGAKLQSFNK-SIAHPVPVEVERIDIGNSESL-GT 183

Query: 588 KSTDKGVGDNSSAPPFTSTESLESKRTEVDINVSML-FXXXXXXXXXXXXTAEQENNTGF 764
           K+ +  V D   + P  S  S  SK  E++ ++ ++               AE+E +TG 
Sbjct: 184 KAKNGKVVDYPPSRPNPSVTSPNSKNYELEEHLDIINDDNDNFQTAKKENVAEREFHTGI 243

Query: 765 DINIPNLNXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAQVNAEGR 899
           DIN+P  N                           LRAQV+AEGR
Sbjct: 244 DINLPQQN--DIDDEIADVDVSDDEADKGPNAAEALRAQVDAEGR 286


>ref|XP_002271492.1| PREDICTED: ell-associated factor Eaf isoform 1 [Vitis vinifera]
           gi|147820042|emb|CAN62810.1| hypothetical protein
           VITISV_025292 [Vitis vinifera]
          Length = 344

 Score =  258 bits (658), Expect = 3e-66
 Identities = 155/285 (54%), Positives = 181/285 (63%), Gaps = 2/285 (0%)
 Frame = +3

Query: 51  EPDTAPPPDHWYNLTLGPSFKD-NSSTKFCTLRYEFKPASIDKTQTGSLHKTKENKVTVE 227
           EP TAP  D WY+LTLG SFKD +SSTKFCTLRYEFKPASIDK Q GSLHK KEN+VTVE
Sbjct: 11  EPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLHKNKENRVTVE 70

Query: 228 FQNNQLGKPKLSFEGSSEDYKDNDAVLFFDGETFRLERLHRAVKRLRHVRLPGESAGAGA 407
           F NNQ GKPK++FEGSSEDYK+NDAVLFFDGETFRLERLHRAVKRLRHVRLPGESA A A
Sbjct: 71  FHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVRLPGESAAAAA 130

Query: 408 ACNTMCVGASSGGQGLIEPRSPVHGKGVKSQPFSKTAMHHSVPVEVERIDIGESKSSPGP 587
                   A++     +E  SP  GKG K Q F+K ++ H VPVEVERIDIG S+S  G 
Sbjct: 131 T-----TAATTSVVPPVESYSPPIGKGAKLQSFNK-SIAHPVPVEVERIDIGNSESL-GT 183

Query: 588 KSTDKGVGDNSSAPPFTSTESLESKRTEVDINVSML-FXXXXXXXXXXXXTAEQENNTGF 764
           K+ +  V D   + P  S  S  SK  E++ ++ ++               AE+E +TG 
Sbjct: 184 KAKNGKVVDYPPSRPNPSVTSPNSKNYELEEHLDIINDDNDNFQTAKKENVAEREFHTGI 243

Query: 765 DINIPNLNXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAQVNAEGR 899
           DIN+P  N                           LRAQV+AEGR
Sbjct: 244 DINLPQQN--DIDDEIADVDVSDDEADKGPNAAEALRAQVDAEGR 286


>ref|XP_003536631.1| PREDICTED: uncharacterized protein LOC100787712 [Glycine max]
          Length = 318

 Score =  252 bits (643), Expect = 2e-64
 Identities = 137/245 (55%), Positives = 173/245 (70%), Gaps = 1/245 (0%)
 Frame = +3

Query: 51  EPDTAPPPDHWYNLTLGPSFKDNSSTKFCTLRYEFKPASIDKTQTGSLHKTKENKVTVEF 230
           EP TAP PD WYNLTLGPSFKD SS K+CTLRYEFKPAS+DKT+ G L KTKEN+V+VEF
Sbjct: 8   EPKTAPEPDRWYNLTLGPSFKDESSNKYCTLRYEFKPASVDKTKPGLLRKTKENRVSVEF 67

Query: 231 QNNQLGKPKLSFEGSSEDYKDNDAVLFFDGETFRLERLHRAVKRLRHVRLPGESAGAGAA 410
           QNNQ+GKPK++FEG+SE+YK+NDAVLFFDGET RLERLHRAVK+LRH+R+PGESAGA + 
Sbjct: 68  QNNQIGKPKVTFEGNSEEYKENDAVLFFDGETLRLERLHRAVKQLRHLRMPGESAGAAST 127

Query: 411 CNTMCVGASSGGQGLIEPRSPVHGKGVKSQPFSKTAMHHSVPVEVERIDIGESKSSPGPK 590
                V A SG    ++PRS   GK VK  P  +++   +VPVEVERIDIGE +++ G K
Sbjct: 128 ----VVAAPSG--PALDPRSSPVGKSVKPAPLGRSSF-LAVPVEVERIDIGEPENT-GIK 179

Query: 591 STDKGVGDNSSAPPF-TSTESLESKRTEVDINVSMLFXXXXXXXXXXXXTAEQENNTGFD 767
           S  K   D+ +  P  TS ++        DI++  LF              E+++N GFD
Sbjct: 180 SGSKMSFDHLNELPINTSPDAKNEVEEHQDIDIHDLF---GSETPEDDHNVEEKDNVGFD 236

Query: 768 INIPN 782
           +N+P+
Sbjct: 237 MNVPH 241


>ref|XP_002271519.1| PREDICTED: ell-associated factor Eaf isoform 2 [Vitis vinifera]
          Length = 343

 Score =  252 bits (643), Expect = 2e-64
 Identities = 154/285 (54%), Positives = 181/285 (63%), Gaps = 2/285 (0%)
 Frame = +3

Query: 51  EPDTAPPPDHWYNLTLGPSFKD-NSSTKFCTLRYEFKPASIDKTQTGSLHKTKENKVTVE 227
           EP TAP  D WY+LTLG SFKD +SSTKFCTLRYEFKPASIDK Q GSLHK KEN+VTVE
Sbjct: 11  EPSTAPESDRWYDLTLGSSFKDPHSSTKFCTLRYEFKPASIDKNQPGSLHKNKENRVTVE 70

Query: 228 FQNNQLGKPKLSFEGSSEDYKDNDAVLFFDGETFRLERLHRAVKRLRHVRLPGESAGAGA 407
           F NNQ GKPK++FEGSSEDYK+NDAVLFFDGETFRLERLHRAVKRLRHVRLPGESA A A
Sbjct: 71  FHNNQPGKPKVTFEGSSEDYKENDAVLFFDGETFRLERLHRAVKRLRHVRLPGESAAAAA 130

Query: 408 ACNTMCVGASSGGQGLIEPRSPVHGKGVKSQPFSKTAMHHSVPVEVERIDIGESKSSPGP 587
                   A++     +E  SP  GKG K Q F+K ++ H VPVEVERIDIG S+S  G 
Sbjct: 131 T-----TAATTSVVPPVESYSPPIGKGAKLQSFNK-SIAHPVPVEVERIDIGNSESL-GI 183

Query: 588 KSTDKGVGDNSSAPPFTSTESLESKRTEVDINVSML-FXXXXXXXXXXXXTAEQENNTGF 764
           ++ +  V D   + P  S  S  SK  E++ ++ ++               AE+E +TG 
Sbjct: 184 RNKNV-VVDYPPSRPNPSVTSPNSKNYELEEHLDIINDDNDNFQTAKKENVAEREFHTGI 242

Query: 765 DINIPNLNXXXXXXXXXXXXXXXXXXXXXXXXXXXLRAQVNAEGR 899
           DIN+P  N                           LRAQV+AEGR
Sbjct: 243 DINLPQQN--DIDDEIADVDVSDDEADKGPNAAEALRAQVDAEGR 285


>ref|NP_001242067.1| uncharacterized protein LOC100796208 [Glycine max]
           gi|255636840|gb|ACU18753.1| unknown [Glycine max]
          Length = 318

 Score =  251 bits (640), Expect = 4e-64
 Identities = 135/244 (55%), Positives = 173/244 (70%), Gaps = 1/244 (0%)
 Frame = +3

Query: 54  PDTAPPPDHWYNLTLGPSFKDNSSTKFCTLRYEFKPASIDKTQTGSLHKTKENKVTVEFQ 233
           P TAP PD WYNLTLGPSFKD+SS K+CTLRYEFKPAS+DKT+ G L KTKEN+V+VEFQ
Sbjct: 9   PKTAPEPDRWYNLTLGPSFKDDSSNKYCTLRYEFKPASVDKTKPGLLRKTKENRVSVEFQ 68

Query: 234 NNQLGKPKLSFEGSSEDYKDNDAVLFFDGETFRLERLHRAVKRLRHVRLPGESAGAGAAC 413
           NNQ+G+PK++FEG+SE+YK+NDAVLFFDGET RLERLHRAVK+LRH+R+PGESAGA +  
Sbjct: 69  NNQIGRPKVTFEGNSEEYKENDAVLFFDGETLRLERLHRAVKQLRHLRMPGESAGAAST- 127

Query: 414 NTMCVGASSGGQGLIEPRSPVHGKGVKSQPFSKTAMHHSVPVEVERIDIGESKSSPGPKS 593
               V A SG    ++PRS   GK VK  P  +++   +VPVEVERIDIGE +++ G KS
Sbjct: 128 ---VVAAPSG--PALDPRSSPVGKSVKPAPLGRSSF-PAVPVEVERIDIGEPENT-GIKS 180

Query: 594 TDKGVGDNSSAPPF-TSTESLESKRTEVDINVSMLFXXXXXXXXXXXXTAEQENNTGFDI 770
             K   D+ +  P  TS ++        DI++  LF              E+++N GFD+
Sbjct: 181 GSKRSFDHLNELPINTSPDAKNEVEEHQDIDIHDLF---GSETPEDDHNVEEKDNVGFDV 237

Query: 771 NIPN 782
           N+P+
Sbjct: 238 NVPH 241


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