BLASTX nr result

ID: Coptis24_contig00014730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014730
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271601.1| PREDICTED: ELMO domain-containing protein A ...   370   e-100
ref|XP_002530961.1| conserved hypothetical protein [Ricinus comm...   362   1e-97
ref|XP_002319208.1| predicted protein [Populus trichocarpa] gi|2...   360   2e-97
ref|XP_004144309.1| PREDICTED: ELMO domain-containing protein A-...   359   5e-97
ref|NP_566211.1| ELMO/CED-12 family protein [Arabidopsis thalian...   355   9e-96

>ref|XP_002271601.1| PREDICTED: ELMO domain-containing protein A [Vitis vinifera]
           gi|296085858|emb|CBI31182.3| unnamed protein product
           [Vitis vinifera]
          Length = 320

 Score =  370 bits (950), Expect = e-100
 Identities = 185/290 (63%), Positives = 215/290 (74%)
 Frame = +3

Query: 3   ESLNEPLLGVYEQNETHSNGYSHXXXXXXXXXXXXERLHWTFLFSNLIAQWAQWLANIIX 182
           + LNEPLLG YE ++  S G               E  HWT LFS+LIA+WAQWLANI+ 
Sbjct: 29  DGLNEPLLGNYEYDDKDSEG--PVLKDLWDDERRKEHQHWTILFSHLIAEWAQWLANIVI 86

Query: 183 XXXXXXXXXXPHPFATHNGLNRKSMSLPLNPXXXXXXXXXXXXXKVPFDGNLLEHQDALM 362
                     P    T NG ++K +   L+P             +VPFDG+ +EHQDAL 
Sbjct: 87  GSGTLLKRLLPFDSTTQNGQSKKILPPSLSPLQGERLRNMQQRLEVPFDGSCVEHQDALR 146

Query: 363 QLWRLAYPGRELPPLKSELWKEMGWQGNDPSTDFRGGGLISLENLIFFAKKYPESFQRLL 542
           +LW LAYPGRELP LKSELWKEMGWQG DPSTDFRGGG ISLENLIFFAKKYP++FQRLL
Sbjct: 147 ELWSLAYPGRELPSLKSELWKEMGWQGTDPSTDFRGGGFISLENLIFFAKKYPDTFQRLL 206

Query: 543 HKQDGNRSEWEYPFAVASINISFMLVQMLDLHSGKPSTEAGIRFLELLREEDEMAFDDLY 722
           HK DGNR++WEYPFAVA INISFML+QMLDL SGKP+++A +RFL+LL  EDEMAFD+L+
Sbjct: 207 HKLDGNRADWEYPFAVAGINISFMLIQMLDLQSGKPTSQAAVRFLQLL-GEDEMAFDNLF 265

Query: 723 CVAFRMMDAQWLAKHASYMQFNEVLKSTRIQLERELALEDVSSVKDLPMY 872
           CVAF+MMDAQWLAK ASYM+FN+VLKSTR QLEREL LEDV SV+DLP Y
Sbjct: 266 CVAFQMMDAQWLAKRASYMEFNDVLKSTRTQLERELELEDVFSVRDLPAY 315


>ref|XP_002530961.1| conserved hypothetical protein [Ricinus communis]
           gi|223529476|gb|EEF31433.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 320

 Score =  362 bits (928), Expect = 1e-97
 Identities = 180/255 (70%), Positives = 199/255 (78%)
 Frame = +3

Query: 108 ERLHWTFLFSNLIAQWAQWLANIIXXXXXXXXXXXPHPFATHNGLNRKSMSLPLNPXXXX 287
           E +HWT + S LIAQW QWLANI+           P PFA  +G N K +   LNP    
Sbjct: 62  ENIHWTLVLSQLIAQWTQWLANIVLGSGSLIGRLLPLPFAGPSGSNGKLLLPYLNPLQEE 121

Query: 288 XXXXXXXXXKVPFDGNLLEHQDALMQLWRLAYPGRELPPLKSELWKEMGWQGNDPSTDFR 467
                     VPFDG+ LEHQDAL QLWRLA+PGR+LP LKS+LWKEMGWQG+DPSTDFR
Sbjct: 122 RLRNLQQRLGVPFDGSRLEHQDALKQLWRLAFPGRQLPSLKSDLWKEMGWQGSDPSTDFR 181

Query: 468 GGGLISLENLIFFAKKYPESFQRLLHKQDGNRSEWEYPFAVASINISFMLVQMLDLHSGK 647
           GGG ISLENLI+FA KYPESFQRLLHK+DG R+EWEYPFAVA +NISFML QMLDL +GK
Sbjct: 182 GGGFISLENLIYFATKYPESFQRLLHKKDGTRAEWEYPFAVAGVNISFMLAQMLDLQTGK 241

Query: 648 PSTEAGIRFLELLREEDEMAFDDLYCVAFRMMDAQWLAKHASYMQFNEVLKSTRIQLERE 827
           PST AGIRFLELL  EDEMAFD+LYCVAF+MMDAQWLAK ASYM+F +VLKSTR QLERE
Sbjct: 242 PSTLAGIRFLELL-GEDEMAFDNLYCVAFQMMDAQWLAKRASYMEFKDVLKSTRTQLERE 300

Query: 828 LALEDVSSVKDLPMY 872
           LALEDV SVKDLP Y
Sbjct: 301 LALEDVCSVKDLPAY 315


>ref|XP_002319208.1| predicted protein [Populus trichocarpa] gi|222857584|gb|EEE95131.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  360 bits (925), Expect = 2e-97
 Identities = 176/255 (69%), Positives = 201/255 (78%)
 Frame = +3

Query: 108 ERLHWTFLFSNLIAQWAQWLANIIXXXXXXXXXXXPHPFATHNGLNRKSMSLPLNPXXXX 287
           + +HWTF+FS LIAQWAQWLANI+           P    + NG NRK +   L+P    
Sbjct: 62  QHIHWTFVFSQLIAQWAQWLANIVLGSGSLIARLLPLSSLSQNGSNRKLLQPSLSPLQEA 121

Query: 288 XXXXXXXXXKVPFDGNLLEHQDALMQLWRLAYPGRELPPLKSELWKEMGWQGNDPSTDFR 467
                     VPFDG+  EHQDAL QLWRLAYP RELP LKSELWK+MGWQG+DPSTDFR
Sbjct: 122 RLRDLQQRLGVPFDGSQAEHQDALKQLWRLAYPDRELPSLKSELWKDMGWQGSDPSTDFR 181

Query: 468 GGGLISLENLIFFAKKYPESFQRLLHKQDGNRSEWEYPFAVASINISFMLVQMLDLHSGK 647
           GGG ISLENLIFFAKKYP+SFQRLL+K+DG R+EWEYPFAVA +NISFML QMLDL +GK
Sbjct: 182 GGGFISLENLIFFAKKYPDSFQRLLNKRDGTRAEWEYPFAVAGVNISFMLAQMLDLQTGK 241

Query: 648 PSTEAGIRFLELLREEDEMAFDDLYCVAFRMMDAQWLAKHASYMQFNEVLKSTRIQLERE 827
           PST AG+RFLELL  +DEMAFD+LYC+AF+MMDAQWLAK ASYM+FN+VLKSTR QLERE
Sbjct: 242 PSTLAGVRFLELL-ADDEMAFDNLYCIAFQMMDAQWLAKRASYMEFNDVLKSTRTQLERE 300

Query: 828 LALEDVSSVKDLPMY 872
           L+LEDV +VKDLP Y
Sbjct: 301 LSLEDVYTVKDLPAY 315


>ref|XP_004144309.1| PREDICTED: ELMO domain-containing protein A-like [Cucumis sativus]
          Length = 319

 Score =  359 bits (922), Expect = 5e-97
 Identities = 183/290 (63%), Positives = 213/290 (73%)
 Frame = +3

Query: 3   ESLNEPLLGVYEQNETHSNGYSHXXXXXXXXXXXXERLHWTFLFSNLIAQWAQWLANIIX 182
           E L+EPLLG +E ++  S                 ++LHWT LFS LIAQWAQW+ANI+ 
Sbjct: 29  EGLSEPLLGSHEYSDRSSE--VRTLEEIWDDERKKQQLHWTLLFSQLIAQWAQWIANIVF 86

Query: 183 XXXXXXXXXXPHPFATHNGLNRKSMSLPLNPXXXXXXXXXXXXXKVPFDGNLLEHQDALM 362
                     P     HNG N + ++ PL+              +VPFDG+ +EHQDAL 
Sbjct: 87  GSGALFGRLLPFSLTMHNGQNHR-VAPPLSILQEERLRSLKQRLEVPFDGSRIEHQDALK 145

Query: 363 QLWRLAYPGRELPPLKSELWKEMGWQGNDPSTDFRGGGLISLENLIFFAKKYPESFQRLL 542
           +LWRLAYP RELPP KSELWK+MGWQG DPSTDFRGGG +SLENLIFFA+ YPESF+RLL
Sbjct: 146 RLWRLAYPDRELPPPKSELWKDMGWQGTDPSTDFRGGGFVSLENLIFFAQTYPESFRRLL 205

Query: 543 HKQDGNRSEWEYPFAVASINISFMLVQMLDLHSGKPSTEAGIRFLELLREEDEMAFDDLY 722
           +K+DG R+EWEYPFAVA INISFMLVQMLDL SGKPS+ AGIRFLELL E DEMAFD+L+
Sbjct: 206 YKKDGKRAEWEYPFAVAGINISFMLVQMLDLQSGKPSSFAGIRFLELL-EHDEMAFDNLF 264

Query: 723 CVAFRMMDAQWLAKHASYMQFNEVLKSTRIQLERELALEDVSSVKDLPMY 872
           CVAF++MDAQWLAK ASYM FN+VLKSTR QLEREL LED SSVK+LP Y
Sbjct: 265 CVAFQLMDAQWLAKRASYMDFNDVLKSTRSQLERELELEDTSSVKELPAY 314


>ref|NP_566211.1| ELMO/CED-12 family protein [Arabidopsis thaliana]
           gi|18377969|gb|AAL67127.1| unknown protein [Arabidopsis
           thaliana] gi|21436073|gb|AAM51237.1| unknown protein
           [Arabidopsis thaliana] gi|332640441|gb|AEE73962.1|
           ELMO/CED-12 family protein [Arabidopsis thaliana]
          Length = 323

 Score =  355 bits (911), Expect = 9e-96
 Identities = 183/292 (62%), Positives = 208/292 (71%), Gaps = 2/292 (0%)
 Frame = +3

Query: 3   ESLNEPLLGVYEQNETHSNGYSHXXXXXXXXXXXXER--LHWTFLFSNLIAQWAQWLANI 176
           E+L+EPLLG     +   N Y              +R  +HWT +FS LIAQWAQW+A I
Sbjct: 29  ETLSEPLLGS-SSTDNSRNEYIEERTLEDIWEEERKRQQVHWTLIFSQLIAQWAQWIAKI 87

Query: 177 IXXXXXXXXXXXPHPFATHNGLNRKSMSLPLNPXXXXXXXXXXXXXKVPFDGNLLEHQDA 356
           +             P     G   + +  PL+              ++PFDG+ +EHQDA
Sbjct: 88  VFGSGSLVGRFLSLPTFGQIGTGGRLLPPPLSMLQEERLRNIKRRIEIPFDGSRMEHQDA 147

Query: 357 LMQLWRLAYPGRELPPLKSELWKEMGWQGNDPSTDFRGGGLISLENLIFFAKKYPESFQR 536
           L QLWRLAYP RELPPLKSELWKEMGWQG DPSTDFRGGG ISLENLIFFAK YPESFQR
Sbjct: 148 LRQLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYISLENLIFFAKTYPESFQR 207

Query: 537 LLHKQDGNRSEWEYPFAVASINISFMLVQMLDLHSGKPSTEAGIRFLELLREEDEMAFDD 716
           LLHKQDG R+EWEYPFAVA INISFML QMLDL SGKPST AGIRFL  L EEDEMAFD+
Sbjct: 208 LLHKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSGKPSTIAGIRFLGFL-EEDEMAFDN 266

Query: 717 LYCVAFRMMDAQWLAKHASYMQFNEVLKSTRIQLERELALEDVSSVKDLPMY 872
           LYC+AF+MMDAQWLA+ ASYM+FN+VLKSTR QLERELAL+DVSS+ DLP +
Sbjct: 267 LYCIAFQMMDAQWLARRASYMEFNDVLKSTRAQLERELALDDVSSITDLPAF 318


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