BLASTX nr result

ID: Coptis24_contig00014726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014726
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324522.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|NP_179990.1| putative leucine-rich repeat transmembrane prot...    86   4e-15
ref|XP_002878725.1| predicted protein [Arabidopsis lyrata subsp....    85   7e-15
ref|XP_002309364.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002274639.2| PREDICTED: putative leucine-rich repeat rece...    84   2e-14

>ref|XP_002324522.1| predicted protein [Populus trichocarpa] gi|222865956|gb|EEF03087.1|
           predicted protein [Populus trichocarpa]
          Length = 860

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 47/111 (42%), Positives = 64/111 (57%)
 Frame = +2

Query: 2   NISYNSFSQSIAPIFANLQRLSGLDLSFNNFSGAVPNDGIFESLTFASLQGNPGLCGSMS 181
           ++S N  S +I         L  L+ SFN FSG + N G F SLT  S  GN GLCG + 
Sbjct: 412 DVSSNQLSGNIPQSIEASPTLKHLNFSFNKFSGNISNKGAFSSLTIDSFLGNDGLCGQIK 471

Query: 182 GIPVCKKKRIHSSIILPILIMLVGTPTICFFGNHLVVKARARQMRKSTIFS 334
           G+P C+++  H S ILP+L+ L  TP +C F   LV+++R R  RK  IF+
Sbjct: 472 GMPNCRRRNAHLSFILPVLLSLFATPLLCMFAYPLVLRSRFR--RKMVIFN 520


>ref|NP_179990.1| putative leucine-rich repeat transmembrane protein kinase
           [Arabidopsis thaliana]
           gi|75339043|sp|Q9ZUI0.1|Y2241_ARATH RecName:
           Full=Putative leucine-rich repeat receptor-like
           serine/threonine-protein kinase At2g24130; Flags:
           Precursor gi|4115373|gb|AAD03374.1| putative
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|330252438|gb|AEC07532.1| putative leucine-rich repeat
           transmembrane protein kinase [Arabidopsis thaliana]
          Length = 980

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/100 (41%), Positives = 60/100 (60%)
 Frame = +2

Query: 2   NISYNSFSQSIAPIFANLQRLSGLDLSFNNFSGAVPNDGIFESLTFASLQGNPGLCGSMS 181
           ++S+N  + +I P F     L  L+ SFN  SG V + G F  LT  S  G+  LCGS+ 
Sbjct: 521 DVSFNRLTGAIPPSFQQSSTLKHLNFSFNLLSGNVSDKGSFSKLTIESFLGDSLLCGSIK 580

Query: 182 GIPVCKKKRIHSSIILPILIMLVGTPTICFFGNHLVVKAR 301
           G+  CKKK  + S++LP+L+ L+ TP +C FG  LV ++R
Sbjct: 581 GMQACKKKHKYPSVLLPVLLSLIATPVLCVFGYPLVQRSR 620


>ref|XP_002878725.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324564|gb|EFH54984.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 987

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/100 (43%), Positives = 60/100 (60%)
 Frame = +2

Query: 2   NISYNSFSQSIAPIFANLQRLSGLDLSFNNFSGAVPNDGIFESLTFASLQGNPGLCGSMS 181
           ++S N  + +I P F     L  L+ SFN FSG V + G F  LT  S  G+  LCGS+ 
Sbjct: 528 DVSSNRLNGAIPPSFQQSSTLKHLNFSFNLFSGNVSDKGSFSKLTIESFLGDSLLCGSIK 587

Query: 182 GIPVCKKKRIHSSIILPILIMLVGTPTICFFGNHLVVKAR 301
           G+  CKKK  + S+ILP+L+ L+ TP +C FG  LV ++R
Sbjct: 588 GMQACKKKHKYPSVILPVLLSLIVTPFLCVFGYPLVQRSR 627


>ref|XP_002309364.1| predicted protein [Populus trichocarpa] gi|222855340|gb|EEE92887.1|
           predicted protein [Populus trichocarpa]
          Length = 981

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/111 (38%), Positives = 62/111 (55%)
 Frame = +2

Query: 2   NISYNSFSQSIAPIFANLQRLSGLDLSFNNFSGAVPNDGIFESLTFASLQGNPGLCGSMS 181
           ++S N  S +I         L  L+ SFN FSG   N G F SLT  S  GN GLCG + 
Sbjct: 526 DVSSNQLSGNIPQSLEASPTLKHLNFSFNKFSGNTSNKGAFSSLTIDSFLGNEGLCGEIK 585

Query: 182 GIPVCKKKRIHSSIILPILIMLVGTPTICFFGNHLVVKARARQMRKSTIFS 334
           G+P C++K  H S++LP+L+ L  T  +C F   L ++++ R  R+  IF+
Sbjct: 586 GMPNCRRKHAHHSLVLPVLLSLFATTLLCIFAYPLALRSKFR--RQMVIFN 634


>ref|XP_002274639.2| PREDICTED: putative leucine-rich repeat receptor-like
           serine/threonine-protein kinase At2g24130-like [Vitis
           vinifera]
          Length = 975

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/101 (43%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
 Frame = +2

Query: 17  SFSQSIAPIFANLQR---LSGLDLSFNNFSGAVPNDGIFESLTFASLQGNPGLCGSMSGI 187
           S +Q I  I  +LQ    L  L+ SFNNFSG + N G F SLT  S  GN GLCGS+ G+
Sbjct: 529 SSNQLIGEIPQSLQASSTLKYLNFSFNNFSGNISNKGSFSSLTMDSFLGNVGLCGSIKGM 588

Query: 188 PVCKKKRIHSSIILPILIMLVGTPTICFFGNHLVVKARARQ 310
           P C++K  +  ++LPIL+ +  TP +C FG   + K+  R+
Sbjct: 589 PNCRRKHAYHLVLLPILLSIFATPILCIFGYPFMHKSGIRR 629


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