BLASTX nr result

ID: Coptis24_contig00014721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014721
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   125   1e-45
ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-...   125   1e-45
ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-...   122   5e-45
ref|XP_002515097.1| dicer-1, putative [Ricinus communis] gi|2235...   121   1e-44
ref|XP_002302679.1| dicer-like protein [Populus trichocarpa] gi|...   120   2e-44

>ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1-like
            [Cucumis sativus]
          Length = 1987

 Score =  125 bits (315), Expect(2) = 1e-45
 Identities = 62/67 (92%), Positives = 64/67 (95%)
 Frame = -3

Query: 431  LRHGSSALEAQIREFVKEVRDELLKPGFNSFGLGDCKAPKVLKDIFESIAGAIFLDSGRD 252
            LRHGSSALE QIR+FVKEV+DELLKPGFNSFGLGDCKAPKVL DI ESIAGAIFLDSGRD
Sbjct: 1739 LRHGSSALEKQIRDFVKEVQDELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1798

Query: 251  TAVVWRV 231
            TAVVWRV
Sbjct: 1799 TAVVWRV 1805



 Score = 82.4 bits (202), Expect(2) = 1e-45
 Identities = 39/41 (95%), Positives = 39/41 (95%)
 Frame = -1

Query: 124  LQPMVTPETLPMHPVRELQERCQQQAEGLEYKATRNGNLAT 2
            L PMVTPETLPMHPVRELQERCQQQAEGLEYKATR GNLAT
Sbjct: 1810 LHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRIGNLAT 1850


>ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
          Length = 1986

 Score =  125 bits (315), Expect(2) = 1e-45
 Identities = 62/67 (92%), Positives = 64/67 (95%)
 Frame = -3

Query: 431  LRHGSSALEAQIREFVKEVRDELLKPGFNSFGLGDCKAPKVLKDIFESIAGAIFLDSGRD 252
            LRHGSSALE QIR+FVKEV+DELLKPGFNSFGLGDCKAPKVL DI ESIAGAIFLDSGRD
Sbjct: 1738 LRHGSSALEKQIRDFVKEVQDELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1797

Query: 251  TAVVWRV 231
            TAVVWRV
Sbjct: 1798 TAVVWRV 1804



 Score = 82.4 bits (202), Expect(2) = 1e-45
 Identities = 39/41 (95%), Positives = 39/41 (95%)
 Frame = -1

Query: 124  LQPMVTPETLPMHPVRELQERCQQQAEGLEYKATRNGNLAT 2
            L PMVTPETLPMHPVRELQERCQQQAEGLEYKATR GNLAT
Sbjct: 1809 LHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRIGNLAT 1849


>ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
          Length = 1971

 Score =  122 bits (306), Expect(2) = 5e-45
 Identities = 60/67 (89%), Positives = 63/67 (94%)
 Frame = -3

Query: 431  LRHGSSALEAQIREFVKEVRDELLKPGFNSFGLGDCKAPKVLKDIFESIAGAIFLDSGRD 252
            LRHGSSALE QIR+FVKEV+DEL KPGFNSFGLGDCKAPKVL DI ESIAGAIFLDSGRD
Sbjct: 1723 LRHGSSALEKQIRDFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1782

Query: 251  TAVVWRV 231
            TAVVW+V
Sbjct: 1783 TAVVWKV 1789



 Score = 84.0 bits (206), Expect(2) = 5e-45
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = -1

Query: 124  LQPMVTPETLPMHPVRELQERCQQQAEGLEYKATRNGNLAT 2
            L PMVTPETLPMHPVRELQERCQQQAEGLEYKATR+GNLAT
Sbjct: 1794 LHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLAT 1834


>ref|XP_002515097.1| dicer-1, putative [Ricinus communis] gi|223545577|gb|EEF47081.1|
            dicer-1, putative [Ricinus communis]
          Length = 1543

 Score =  121 bits (303), Expect(2) = 1e-44
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = -3

Query: 431  LRHGSSALEAQIREFVKEVRDELLKPGFNSFGLGDCKAPKVLKDIFESIAGAIFLDSGRD 252
            LRHGSSALE QIR+FV+EV+DEL KPGFNSFGLGDCKAPKVL DI ESIAGAIFLDSGRD
Sbjct: 1295 LRHGSSALEKQIRDFVREVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1354

Query: 251  TAVVWRV 231
            TAVVW+V
Sbjct: 1355 TAVVWKV 1361



 Score = 84.0 bits (206), Expect(2) = 1e-44
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = -1

Query: 124  LQPMVTPETLPMHPVRELQERCQQQAEGLEYKATRNGNLAT 2
            L PMVTPETLPMHPVRELQERCQQQAEGLEYKATR+GNLAT
Sbjct: 1366 LHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLAT 1406


>ref|XP_002302679.1| dicer-like protein [Populus trichocarpa] gi|222844405|gb|EEE81952.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1817

 Score =  120 bits (300), Expect(2) = 2e-44
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = -3

Query: 431  LRHGSSALEAQIREFVKEVRDELLKPGFNSFGLGDCKAPKVLKDIFESIAGAIFLDSGRD 252
            LRHGSSALE QIR+FV+EV+DELLKP FNSFGLGDCKAPKVL DI ESIAGAIFLDSGRD
Sbjct: 1614 LRHGSSALEKQIRDFVREVQDELLKPVFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1673

Query: 251  TAVVWRV 231
            TAVVW+V
Sbjct: 1674 TAVVWKV 1680



 Score = 84.0 bits (206), Expect(2) = 2e-44
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = -1

Query: 124  LQPMVTPETLPMHPVRELQERCQQQAEGLEYKATRNGNLAT 2
            L PMVTPETLPMHPVRELQERCQQQAEGLEYKATR+GNLAT
Sbjct: 1685 LHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLAT 1725