BLASTX nr result
ID: Coptis24_contig00014721
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014721 (433 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl... 125 1e-45 ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-... 125 1e-45 ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-... 122 5e-45 ref|XP_002515097.1| dicer-1, putative [Ricinus communis] gi|2235... 121 1e-44 ref|XP_002302679.1| dicer-like protein [Populus trichocarpa] gi|... 120 2e-44 >ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1-like [Cucumis sativus] Length = 1987 Score = 125 bits (315), Expect(2) = 1e-45 Identities = 62/67 (92%), Positives = 64/67 (95%) Frame = -3 Query: 431 LRHGSSALEAQIREFVKEVRDELLKPGFNSFGLGDCKAPKVLKDIFESIAGAIFLDSGRD 252 LRHGSSALE QIR+FVKEV+DELLKPGFNSFGLGDCKAPKVL DI ESIAGAIFLDSGRD Sbjct: 1739 LRHGSSALEKQIRDFVKEVQDELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1798 Query: 251 TAVVWRV 231 TAVVWRV Sbjct: 1799 TAVVWRV 1805 Score = 82.4 bits (202), Expect(2) = 1e-45 Identities = 39/41 (95%), Positives = 39/41 (95%) Frame = -1 Query: 124 LQPMVTPETLPMHPVRELQERCQQQAEGLEYKATRNGNLAT 2 L PMVTPETLPMHPVRELQERCQQQAEGLEYKATR GNLAT Sbjct: 1810 LHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRIGNLAT 1850 >ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus] Length = 1986 Score = 125 bits (315), Expect(2) = 1e-45 Identities = 62/67 (92%), Positives = 64/67 (95%) Frame = -3 Query: 431 LRHGSSALEAQIREFVKEVRDELLKPGFNSFGLGDCKAPKVLKDIFESIAGAIFLDSGRD 252 LRHGSSALE QIR+FVKEV+DELLKPGFNSFGLGDCKAPKVL DI ESIAGAIFLDSGRD Sbjct: 1738 LRHGSSALEKQIRDFVKEVQDELLKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1797 Query: 251 TAVVWRV 231 TAVVWRV Sbjct: 1798 TAVVWRV 1804 Score = 82.4 bits (202), Expect(2) = 1e-45 Identities = 39/41 (95%), Positives = 39/41 (95%) Frame = -1 Query: 124 LQPMVTPETLPMHPVRELQERCQQQAEGLEYKATRNGNLAT 2 L PMVTPETLPMHPVRELQERCQQQAEGLEYKATR GNLAT Sbjct: 1809 LHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRIGNLAT 1849 >ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera] Length = 1971 Score = 122 bits (306), Expect(2) = 5e-45 Identities = 60/67 (89%), Positives = 63/67 (94%) Frame = -3 Query: 431 LRHGSSALEAQIREFVKEVRDELLKPGFNSFGLGDCKAPKVLKDIFESIAGAIFLDSGRD 252 LRHGSSALE QIR+FVKEV+DEL KPGFNSFGLGDCKAPKVL DI ESIAGAIFLDSGRD Sbjct: 1723 LRHGSSALEKQIRDFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1782 Query: 251 TAVVWRV 231 TAVVW+V Sbjct: 1783 TAVVWKV 1789 Score = 84.0 bits (206), Expect(2) = 5e-45 Identities = 39/41 (95%), Positives = 40/41 (97%) Frame = -1 Query: 124 LQPMVTPETLPMHPVRELQERCQQQAEGLEYKATRNGNLAT 2 L PMVTPETLPMHPVRELQERCQQQAEGLEYKATR+GNLAT Sbjct: 1794 LHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLAT 1834 >ref|XP_002515097.1| dicer-1, putative [Ricinus communis] gi|223545577|gb|EEF47081.1| dicer-1, putative [Ricinus communis] Length = 1543 Score = 121 bits (303), Expect(2) = 1e-44 Identities = 59/67 (88%), Positives = 63/67 (94%) Frame = -3 Query: 431 LRHGSSALEAQIREFVKEVRDELLKPGFNSFGLGDCKAPKVLKDIFESIAGAIFLDSGRD 252 LRHGSSALE QIR+FV+EV+DEL KPGFNSFGLGDCKAPKVL DI ESIAGAIFLDSGRD Sbjct: 1295 LRHGSSALEKQIRDFVREVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1354 Query: 251 TAVVWRV 231 TAVVW+V Sbjct: 1355 TAVVWKV 1361 Score = 84.0 bits (206), Expect(2) = 1e-44 Identities = 39/41 (95%), Positives = 40/41 (97%) Frame = -1 Query: 124 LQPMVTPETLPMHPVRELQERCQQQAEGLEYKATRNGNLAT 2 L PMVTPETLPMHPVRELQERCQQQAEGLEYKATR+GNLAT Sbjct: 1366 LHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLAT 1406 >ref|XP_002302679.1| dicer-like protein [Populus trichocarpa] gi|222844405|gb|EEE81952.1| dicer-like protein [Populus trichocarpa] Length = 1817 Score = 120 bits (300), Expect(2) = 2e-44 Identities = 59/67 (88%), Positives = 63/67 (94%) Frame = -3 Query: 431 LRHGSSALEAQIREFVKEVRDELLKPGFNSFGLGDCKAPKVLKDIFESIAGAIFLDSGRD 252 LRHGSSALE QIR+FV+EV+DELLKP FNSFGLGDCKAPKVL DI ESIAGAIFLDSGRD Sbjct: 1614 LRHGSSALEKQIRDFVREVQDELLKPVFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGRD 1673 Query: 251 TAVVWRV 231 TAVVW+V Sbjct: 1674 TAVVWKV 1680 Score = 84.0 bits (206), Expect(2) = 2e-44 Identities = 39/41 (95%), Positives = 40/41 (97%) Frame = -1 Query: 124 LQPMVTPETLPMHPVRELQERCQQQAEGLEYKATRNGNLAT 2 L PMVTPETLPMHPVRELQERCQQQAEGLEYKATR+GNLAT Sbjct: 1685 LHPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLAT 1725