BLASTX nr result

ID: Coptis24_contig00014717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014717
         (1450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284930.2| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   594   e-167
ref|XP_002514760.1| catalytic, putative [Ricinus communis] gi|22...   573   e-161
emb|CBI15223.3| unnamed protein product [Vitis vinifera]              571   e-160
ref|XP_004137584.1| PREDICTED: probable glucuronoxylan glucurono...   541   e-151
ref|XP_002320639.1| predicted protein [Populus trichocarpa] gi|2...   540   e-151

>ref|XP_002284930.2| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase isoform 1
            [Vitis vinifera]
          Length = 498

 Score =  594 bits (1531), Expect = e-167
 Identities = 297/439 (67%), Positives = 350/439 (79%), Gaps = 7/439 (1%)
 Frame = -2

Query: 1296 RYLLCLVTXXXXXXXXXXXXXXXXXSVALINGSVFRQILVNNSSAYIRPNTNNNSDRSLD 1117
            R+L CL+T                 + + I  SVF+ ILVN++S Y + +  N   +   
Sbjct: 10   RFLFCLITISMFLLILSSLFLLQFSNTSFIPNSVFKLILVNSTSVYFKSSGKNEQTKLPF 69

Query: 1116 TTS---RISGKVP---NQNSQISIASKEVIEETIGRRNVCDTNQALLKIFMYDLPPEFHF 955
             TS    +  K P     + QIS ASK++     GRR  CD NQA L+ FMYDLPPEFHF
Sbjct: 70   VTSVASPVDSKRPMGREGSCQISNASKKMDALGQGRRKGCDPNQAHLRAFMYDLPPEFHF 129

Query: 954  GLLGWKGNGNQIWPDVSKLNRIPSYPGGLNLQHSIEYWLTLDLLASNTPSIMRPCSAIRV 775
            GLLGW G  NQIWP+VS   RIPSYPGGLNLQHSIEYWLTLDLL+S+TP+I+RPCSAIRV
Sbjct: 130  GLLGWTGKANQIWPNVSNPGRIPSYPGGLNLQHSIEYWLTLDLLSSDTPNIVRPCSAIRV 189

Query: 774  LNSTQADAIFVPFFSSLSYNRHSKTHGKGKKSLNRLLQERLVDFLVRRDEWKRWGGKDHI 595
             NS+QAD IFVPFFSSLSYNRHS+ HGK K S+N++LQ++LV+FL+ +DEWK+ GGK+H+
Sbjct: 190  KNSSQADIIFVPFFSSLSYNRHSRLHGKEKVSVNKMLQDKLVNFLMGQDEWKQLGGKNHL 249

Query: 594  ILAHHPNSMLNVRKQLGSAMLVLADFGRYPVEIANIDKDIIVPYRHVVRS-VNGDSADFN 418
            I+AHHPNSML+ RK+LGSAM VLADFGRYPVEIANIDKD+I PY+HV+RS    DSA F 
Sbjct: 250  IVAHHPNSMLDARKKLGSAMFVLADFGRYPVEIANIDKDVIAPYKHVLRSNPVADSATFE 309

Query: 417  RRPILVYFQGAIYRKDGGFIRQELYYLLKDEKDVHFTFGSVHGSGINKAAQGMSSSKFCL 238
             RP+LVYFQGAIYRKDGG IRQELYYLL+DEKDVHFTFGSV G+GIN A++GM+SSKFCL
Sbjct: 310  GRPLLVYFQGAIYRKDGGAIRQELYYLLRDEKDVHFTFGSVRGNGINGASEGMASSKFCL 369

Query: 237  NIAGDTPSSNRLFDAISSHCVPVIISDEIELPYEDILDYSEFCIFVPASDAMKKGFLLNL 58
            NIAGDTPSSNRLFDAI SHCVPVIISDEIELP+ED+LDYSEFCIFV ASDA+K GFLLNL
Sbjct: 370  NIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFCIFVRASDAVKNGFLLNL 429

Query: 57   LKRIKRDKWTKMWEKLKDV 1
            L+ IKR+KWTKMWE+LK++
Sbjct: 430  LRGIKREKWTKMWERLKEI 448


>ref|XP_002514760.1| catalytic, putative [Ricinus communis] gi|223546364|gb|EEF47866.1|
            catalytic, putative [Ricinus communis]
          Length = 490

 Score =  573 bits (1476), Expect = e-161
 Identities = 277/415 (66%), Positives = 336/415 (80%), Gaps = 10/415 (2%)
 Frame = -2

Query: 1215 ALINGSVFRQILVNNSSAYIRPNTNN--------NSDRSLDTTSRI-SGKVPNQNSQISI 1063
            + +  SV + ILVN++S Y++ N  N        +S  S DT S + SG     N +++ 
Sbjct: 37   SFLPSSVIKLILVNSTSIYLKSNVKNELGKFPFFSSKPSQDTRSSMRSGGENCSNFEVAA 96

Query: 1062 ASKEVIEETIGRRNVCDTNQALLKIFMYDLPPEFHFGLLGWKGNGNQIWPDVSKLNRIPS 883
            + K +        N C+ NQ LLK++MYD+PPEFHFGLLGWKG  NQIWP+V  L+ IP 
Sbjct: 97   SGKHI-------GNTCNPNQGLLKVYMYDMPPEFHFGLLGWKGKANQIWPNVDDLDHIPL 149

Query: 882  YPGGLNLQHSIEYWLTLDLLASNTPSIMRPCSAIRVLNSTQADAIFVPFFSSLSYNRHSK 703
            YPGGLNLQHSIEYWLTLDLLASN P ++RPC A+RV NS+QAD IFVP+FSSLSYNRHSK
Sbjct: 150  YPGGLNLQHSIEYWLTLDLLASNRPKVVRPCGAVRVDNSSQADIIFVPYFSSLSYNRHSK 209

Query: 702  THGKGKKSLNRLLQERLVDFLVRRDEWKRWGGKDHIILAHHPNSMLNVRKQLGSAMLVLA 523
             HGK K S+N++LQ RLV+FL+ +DEWKR GG+DH+I+AHHPNSML+ RK LG+AM VLA
Sbjct: 210  LHGKEKVSMNKMLQNRLVEFLMGQDEWKRSGGRDHLIVAHHPNSMLDARKMLGAAMFVLA 269

Query: 522  DFGRYPVEIANIDKDIIVPYRHVVRSV-NGDSADFNRRPILVYFQGAIYRKDGGFIRQEL 346
            DFGRYPVEIAN+ KD+I PY+HVVR++ +G+SA F  RPILV+FQGAIYRKDGG IRQEL
Sbjct: 270  DFGRYPVEIANLKKDVIAPYKHVVRTIPSGESAQFEERPILVFFQGAIYRKDGGIIRQEL 329

Query: 345  YYLLKDEKDVHFTFGSVHGSGINKAAQGMSSSKFCLNIAGDTPSSNRLFDAISSHCVPVI 166
            YYLLKDEKDVHFTFG+V  +G+NKA QGM+SSKFCLNIAGDTPSSNRLFDAI SHCVPVI
Sbjct: 330  YYLLKDEKDVHFTFGTVRKNGVNKAGQGMASSKFCLNIAGDTPSSNRLFDAIVSHCVPVI 389

Query: 165  ISDEIELPYEDILDYSEFCIFVPASDAMKKGFLLNLLKRIKRDKWTKMWEKLKDV 1
            ISD+IELP+ED+LDYSEF +FV ASDA+K+G+LLNLL+ I RDKWT MWE+LK++
Sbjct: 390  ISDDIELPFEDVLDYSEFSVFVRASDAVKEGYLLNLLQSIDRDKWTMMWERLKEI 444


>emb|CBI15223.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  571 bits (1472), Expect = e-160
 Identities = 286/433 (66%), Positives = 334/433 (77%), Gaps = 1/433 (0%)
 Frame = -2

Query: 1296 RYLLCLVTXXXXXXXXXXXXXXXXXSVALINGSVFRQILVNNSSAYIRPNTNNNSDRSLD 1117
            R+L CL+T                 + + I  SVF+ ILVN++S              +D
Sbjct: 10   RFLFCLITISMFLLILSSLFLLQFSNTSFIPNSVFKLILVNSTS-------------KMD 56

Query: 1116 TTSRISGKVPNQNSQISIASKEVIEETIGRRNVCDTNQALLKIFMYDLPPEFHFGLLGWK 937
               +                        GRR  CD NQA L+ FMYDLPPEFHFGLLGW 
Sbjct: 57   ALGQ------------------------GRRKGCDPNQAHLRAFMYDLPPEFHFGLLGWT 92

Query: 936  GNGNQIWPDVSKLNRIPSYPGGLNLQHSIEYWLTLDLLASNTPSIMRPCSAIRVLNSTQA 757
            G  NQIWP+VS   RIPSYPGGLNLQHSIEYWLTLDLL+S+TP+I+RPCSAIRV NS+QA
Sbjct: 93   GKANQIWPNVSNPGRIPSYPGGLNLQHSIEYWLTLDLLSSDTPNIVRPCSAIRVKNSSQA 152

Query: 756  DAIFVPFFSSLSYNRHSKTHGKGKKSLNRLLQERLVDFLVRRDEWKRWGGKDHIILAHHP 577
            D IFVPFFSSLSYNRHS+ HGK K S+N++LQ++LV+FL+ +DEWK+ GGK+H+I+AHHP
Sbjct: 153  DIIFVPFFSSLSYNRHSRLHGKEKVSVNKMLQDKLVNFLMGQDEWKQLGGKNHLIVAHHP 212

Query: 576  NSMLNVRKQLGSAMLVLADFGRYPVEIANIDKDIIVPYRHVVRS-VNGDSADFNRRPILV 400
            NSML+ RK+LGSAM VLADFGRYPVEIANIDKD+I PY+HV+RS    DSA F  RP+LV
Sbjct: 213  NSMLDARKKLGSAMFVLADFGRYPVEIANIDKDVIAPYKHVLRSNPVADSATFEGRPLLV 272

Query: 399  YFQGAIYRKDGGFIRQELYYLLKDEKDVHFTFGSVHGSGINKAAQGMSSSKFCLNIAGDT 220
            YFQGAIYRKDGG IRQELYYLL+DEKDVHFTFGSV G+GIN A++GM+SSKFCLNIAGDT
Sbjct: 273  YFQGAIYRKDGGAIRQELYYLLRDEKDVHFTFGSVRGNGINGASEGMASSKFCLNIAGDT 332

Query: 219  PSSNRLFDAISSHCVPVIISDEIELPYEDILDYSEFCIFVPASDAMKKGFLLNLLKRIKR 40
            PSSNRLFDAI SHCVPVIISDEIELP+ED+LDYSEFCIFV ASDA+K GFLLNLL+ IKR
Sbjct: 333  PSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFCIFVRASDAVKNGFLLNLLRGIKR 392

Query: 39   DKWTKMWEKLKDV 1
            +KWTKMWE+LK++
Sbjct: 393  EKWTKMWERLKEI 405


>ref|XP_004137584.1| PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7-like
            [Cucumis sativus]
          Length = 494

 Score =  541 bits (1393), Expect = e-151
 Identities = 255/403 (63%), Positives = 329/403 (81%), Gaps = 3/403 (0%)
 Frame = -2

Query: 1200 SVFRQILVNNSSAYIRPNTNNNSDRSLDTTSRISGKVPNQNSQISIASKEVIEETIGRRN 1021
            SV + I+VNN+S Y++PN  +               V +++    +++    E ++  ++
Sbjct: 42   SVLKFIVVNNTSNYLKPNVEDEPMELPTQPGEAKEAVTDRDVDYPVSNFVKDEVSVENQS 101

Query: 1020 V--CDTNQALLKIFMYDLPPEFHFGLLGWKGNGNQIWPDVSKLNRIPSYPGGLNLQHSIE 847
               CD  +A L++FMYDLPP +HFGLLGWKG  +QIWP VS  ++IP YPGGLNLQHS+E
Sbjct: 102  DLGCDPAKARLRVFMYDLPPLYHFGLLGWKGEKDQIWPYVSNRSQIPPYPGGLNLQHSME 161

Query: 846  YWLTLDLLASNTPSIMRPCSAIRVLNSTQADAIFVPFFSSLSYNRHSKTHGKGKKSLNRL 667
            YWLTLDLL+SN P +   C+A+RV +S+QAD IFVPFFSSLSYN+HSK+HGK K ++N++
Sbjct: 162  YWLTLDLLSSNVPDMDHTCTAVRVKDSSQADVIFVPFFSSLSYNQHSKSHGKEKINVNKI 221

Query: 666  LQERLVDFLVRRDEWKRWGGKDHIILAHHPNSMLNVRKQLGSAMLVLADFGRYPVEIANI 487
            LQ++L+DFL  + EW+R GGK+H+++AHHPNSML+ RK+LGSAM VLADFGRYP  IANI
Sbjct: 222  LQQKLIDFLFGQKEWRRTGGKNHLVIAHHPNSMLDARKKLGSAMFVLADFGRYPAAIANI 281

Query: 486  DKDIIVPYRHVVRSV-NGDSADFNRRPILVYFQGAIYRKDGGFIRQELYYLLKDEKDVHF 310
            +KDII PYRH+V++V +  SA F+ RPILVYFQGAIYRKDGG +RQELYYLLKDE+DVHF
Sbjct: 282  EKDIIAPYRHIVKTVPSSKSATFDERPILVYFQGAIYRKDGGVVRQELYYLLKDEEDVHF 341

Query: 309  TFGSVHGSGINKAAQGMSSSKFCLNIAGDTPSSNRLFDAISSHCVPVIISDEIELPYEDI 130
            TFGSV G+GINKA QGM+SSKFCLNIAGDTPSSNRLFD+I+SHCVPVIISD+IELPYEDI
Sbjct: 342  TFGSVKGNGINKAGQGMASSKFCLNIAGDTPSSNRLFDSIASHCVPVIISDDIELPYEDI 401

Query: 129  LDYSEFCIFVPASDAMKKGFLLNLLKRIKRDKWTKMWEKLKDV 1
            LDYSEFC+FV A+D+++KG+LLNLL+ I R++WTKMW+++K++
Sbjct: 402  LDYSEFCVFVRAADSIRKGYLLNLLRGIGRERWTKMWDRIKEI 444


>ref|XP_002320639.1| predicted protein [Populus trichocarpa] gi|222861412|gb|EEE98954.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  540 bits (1392), Expect = e-151
 Identities = 253/333 (75%), Positives = 300/333 (90%), Gaps = 1/333 (0%)
 Frame = -2

Query: 996 LKIFMYDLPPEFHFGLLGWKGNGNQIWPDVSKLNRIPSYPGGLNLQHSIEYWLTLDLLAS 817
           LK+F+YDLPPEFHFGLLGWKGN NQ WP+V   +RIP YPGGLNLQHS+EYWLTLDLLAS
Sbjct: 3   LKVFVYDLPPEFHFGLLGWKGNTNQTWPNVDSHSRIPPYPGGLNLQHSVEYWLTLDLLAS 62

Query: 816 NTPSIMRPCSAIRVLNSTQADAIFVPFFSSLSYNRHSKTHGKGKKSLNRLLQERLVDFLV 637
           NTP +    +A+RV NS+QAD +FVPFFSSLSYNRHSK HGK K S+N++LQ +LV FL 
Sbjct: 63  NTPKVG---TAVRVQNSSQADIVFVPFFSSLSYNRHSKLHGKEKVSVNKMLQTKLVQFLT 119

Query: 636 RRDEWKRWGGKDHIILAHHPNSMLNVRKQLGSAMLVLADFGRYPVEIANIDKDIIVPYRH 457
            RDEWKR+GG DH+I+AHHPNSML+ RK+LGSAM VLADFGRYPVEIAN+ KDII PY+H
Sbjct: 120 ARDEWKRFGGNDHLIVAHHPNSMLHARKKLGSAMFVLADFGRYPVEIANLGKDIIAPYKH 179

Query: 456 VVRSV-NGDSADFNRRPILVYFQGAIYRKDGGFIRQELYYLLKDEKDVHFTFGSVHGSGI 280
           VVR++ +G+SA F+RRPIL++FQGAIYRKDGG IRQELYYLLKDEKDVHFTFG+  G+GI
Sbjct: 180 VVRTIPSGESAQFDRRPILMHFQGAIYRKDGGAIRQELYYLLKDEKDVHFTFGTYRGNGI 239

Query: 279 NKAAQGMSSSKFCLNIAGDTPSSNRLFDAISSHCVPVIISDEIELPYEDILDYSEFCIFV 100
            KAAQGM+SSKFCLNIAGDTPSSNRLFDAI+SHCVPVIISD+IELP+ED+LDYSEFC+FV
Sbjct: 240 KKAAQGMASSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDDIELPFEDVLDYSEFCLFV 299

Query: 99  PASDAMKKGFLLNLLKRIKRDKWTKMWEKLKDV 1
            ASDA+KKG+LL+LL+ I++D+WTK+WE+LK++
Sbjct: 300 RASDAVKKGYLLDLLRGIEKDQWTKLWERLKEI 332