BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014716
         (1158 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   125   3e-26
emb|CBI39148.3| unnamed protein product [Vitis vinifera]              122   2e-25
ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-25
ref|XP_003612646.1| F-box family protein [Medicago truncatula] g...   121   4e-25
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...   121   4e-25

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score =  125 bits (313), Expect = 3e-26
 Identities = 105/361 (29%), Positives = 155/361 (42%), Gaps = 33/361 (9%)
 Frame = +1

Query: 37   LPSDIILDNIFSSLPLKSLSQCRWVCKTWYRFIHHPRFAQIHYQMAIQNHCSPCLGLFLE 216
            LP +I  D I S LP+ SL Q + VC+ W   +  P+   ++   + Q+   PCL L  +
Sbjct: 28   LPREIAHD-ILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCD 86

Query: 217  YP-RNELRLIDHQVFDNLKTSVVSSDVETYPLV-EFGFSYLQIIGVVNGLVCFGEDHHRS 390
            +P RN L  +D    +  K  V         ++ EF     +++G  NGL+C  +  +  
Sbjct: 87   FPIRNNLYFVDFAAHEEEKEKVKRIPAPFSSMMPEF-----EVVGSCNGLLCLSDSLYND 141

Query: 391  YLPRKYIIYNPITGEHFQLPEDTCIFTDIDFAALGFDSAANEYKVIRI---RDDHRG--- 552
             L     IYNP TG + +LP+          +  GF+    EYKVIRI   R+ H G   
Sbjct: 142  SL----YIYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYPR 197

Query: 553  ----------AEIFTLGTTRWRRVEDHVPKIYKTQPFSVLVNGNLHWIS--SEQDGPLSI 696
                       +I TLG   WR +     ++ + +    LVNG LHWIS          +
Sbjct: 198  SRRIIYPLSEVQILTLGCPEWRSLGKVSYRLVR-RASGALVNGRLHWISRPCRNKPARRL 256

Query: 697  FAFNVASEKFCEFESPPFQQEQGRLKGALRVIEELLCFIDMKEFDEFEMWVMKDYGVQGS 876
             +F++  E+F E  S P      R    L V+   L       +   E+WVMK+Y V+ S
Sbjct: 257  VSFDLTDEQFREV-SKPDCGGLNRCNYHLVVLRGCLSAAVYCNYGRLEIWVMKEYNVKES 315

Query: 877  WAKEYKFNAQVLNCTLHNYTCGQNVFK-------------LKNGEFLVKYGPKDFGYYDA 1017
            W KEY   A +      N      ++K             LKNGE L++Y  +    YD 
Sbjct: 316  WVKEYNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYDP 375

Query: 1018 K 1020
            K
Sbjct: 376  K 376


>emb|CBI39148.3| unnamed protein product [Vitis vinifera]
          Length = 711

 Score =  122 bits (306), Expect = 2e-25
 Identities = 88/290 (30%), Positives = 143/290 (49%), Gaps = 12/290 (4%)
 Frame = +1

Query: 46  DIILDNIFSSLPLKSLSQCRWVCKTWYRFIHHPRFAQIHYQMAIQNHCSPCLGLFLEYPR 225
           ++I+ +I S LP+KSL + R VCK W   I HP+F + H +   Q H  P +GL      
Sbjct: 6   EVIMVDILSRLPVKSLLRFRCVCKAWCTLISHPQFVETHLR---QQHKRPVIGL------ 56

Query: 226 NELRLIDHQVFDNLKTSVVSSDVETYPLVEFGFSYLQIIGVVNGLVCFGEDHHRSYL--- 396
               ++ H V D L    ++ D+E +  +        ++   NGL+C  + ++  Y    
Sbjct: 57  ----VVPHSVDDPLHKDDLAVDLELHLGIP-NKRTTTVLDSCNGLLCVVDCYYGFYSLKP 111

Query: 397 PRKYIIYNPITGEHFQLPEDTCIFTDIDFAALGFDSAANEYKVIRI----RDDHRGAEIF 564
           P+K I++NP T +   +P  + +       +  +D  +++YK++RI      D  G +IF
Sbjct: 112 PQKLILWNPSTRQCNHIPCPSFVGYQNCMYSFFYDPGSDDYKIVRIFTFLGKDKTGIDIF 171

Query: 565 TLGTTRWRRVEDHVPKIYKTQPFSVLVNGNLHWISSE-----QDGPLSIFAFNVASEKFC 729
           TL T +WRRVE+    +      +   NGNLHW++       +D   S+ AF++  EKF 
Sbjct: 172 TLKTNKWRRVEETHSSVIGYWS-ATYFNGNLHWLAFRYGGYGEDERSSMVAFSLREEKFQ 230

Query: 730 EFESPPFQQEQGRLKGALRVIEELLCFIDMKEFDEFEMWVMKDYGVQGSW 879
           E E P       R    LRV+   LC   +   D+   WVM++YG++ SW
Sbjct: 231 EMELP-----SQRAVFGLRVLGGCLCVDGLYTNDK---WVMEEYGIKESW 272


>ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|222860057|gb|EEE97604.1|
            predicted protein [Populus trichocarpa]
          Length = 411

 Score =  122 bits (306), Expect = 2e-25
 Identities = 96/363 (26%), Positives = 172/363 (47%), Gaps = 26/363 (7%)
 Frame = +1

Query: 10   EKSGEFFSKLPSDIILDNIFSSLPLKSLSQCRWVCKTWYRFIHHPRFAQIHYQMAIQNHC 189
            E+S    ++LP+ +I+D I S LP++ L  C+ VCKTW   +  P F ++H +       
Sbjct: 30   EQSKCLVAELPNALIID-ILSRLPIRPLLNCKSVCKTWLHLMSDPSFVRLHLER------ 82

Query: 190  SPCLGLFLEYP-----RNELRLIDHQVFDNLKTSVVSSDVETYPLVEFGFSYLQIIGVVN 354
            SP   L  + P       E+ L++  V +++        +  +P   F  + ++I+   N
Sbjct: 83   SPTTLLIQKTPFERKESTEMLLVE-IVEEDISKPFYIEIIRLFPTKNFPDTDVRILNSCN 141

Query: 355  GLVCFGEDHHRSYLPRKYIIYNPITGEHFQLPEDTCIFTDIDF---AALGFDSAANEYKV 525
            GL+C  ED         ++  NP+ GE+  +P    + TD  F    A GF S +N+YKV
Sbjct: 142  GLLCLYEDSGDKSDMMVHVC-NPVLGEYIDIP---VVNTDKKFEHHLAFGFSSVSNQYKV 197

Query: 526  IRIRDDHRG-------AEIFTLGTTRWRRVEDHVPKIYKTQPFSVLVNGNLHWISSEQDG 684
            ++     +        AEI+T+GT +WR + +   ++ ++   +  ++ ++HWI    + 
Sbjct: 198  LQTFYPEKDLTAAPCLAEIYTVGTGQWRSIGNASFRL-QSLDANAFLHDSIHWIEYRSNS 256

Query: 685  PLSIFAFNVASEKFCEFESPPFQQ-----------EQGRLKGALRVIEELLCFIDMKEFD 831
               + AF+  SE+F     PP  Q             G +KG L +   +       E +
Sbjct: 257  IGFVSAFDFVSEQFKLVALPPASQIHDGMGRCYPSSVGVIKGCLFMTNGVCI-----ENE 311

Query: 832  EFEMWVMKDYGVQGSWAKEYKFNAQVLNCTLHNYTCGQNVFKLKNGEFLVKYGPKDFGYY 1011
            +FE+WVM++YG++ SW K++  +    N  + +Y   Q ++ L +GE L+    +  G Y
Sbjct: 312  KFEIWVMEEYGIKESWTKKFVLS----NLEVQHYVSYQPLYFLSSGEILICEDDESIGVY 367

Query: 1012 DAK 1020
              K
Sbjct: 368  VPK 370


>ref|XP_003612646.1| F-box family protein [Medicago truncatula]
           gi|355513981|gb|AES95604.1| F-box family protein
           [Medicago truncatula]
          Length = 441

 Score =  121 bits (303), Expect = 4e-25
 Identities = 101/314 (32%), Positives = 140/314 (44%), Gaps = 31/314 (9%)
 Frame = +1

Query: 43  SDIILDNIFSSLPLKSLSQCRWVCKTWYRFIHHPRFAQIHYQMAIQNHCSPCLGL----- 207
           S +I+ NI   LP+K +S C+ VCKTW   I  P FA ++ Q A          L     
Sbjct: 30  SSLIITNILLQLPIKDVSICKCVCKTWNALISEPYFATLYSQHASLGFLLRTRNLRLVSR 89

Query: 208 ---FLEY-PRNELRLIDHQVFD-NLKTSVVSSDV-ETYPLVEFG--FSYLQIIGVVNGLV 363
               LEY P+   R  D  V + N K  +   +  +TY    +        ++   NGL+
Sbjct: 90  TLHLLEYQPKKFRRAFDIDVVNFNPKFKLPLRNANDTYQPTPYKPEDDKFGVVNSCNGLL 149

Query: 364 CFGEDHHRSYLPRKYIIYNPITGEHFQLPEDTCIFTDID--FAALGFDSAANEYKVIRI- 534
           C  E +  ++L    ++ NPI GE  +LPE   I        AALGF    NEYKVIR+ 
Sbjct: 150 CLSEPYTVNHL----VVCNPIIGEFIRLPEAIGIANTRKPICAALGFQPKTNEYKVIRMW 205

Query: 535 --------RDDHRGAEIFTLGTTRWRRVEDHVPKIYKTQPFSVLVNGNLHWIS-SEQDGP 687
                   + D    E+ TLGTT WR VE      +        VNG LHWI+  +++  
Sbjct: 206 KRCDGWCYKSDVMVVEMHTLGTTTWRNVEVDPMFSFTRLGSPTCVNGALHWINYDDKNKT 265

Query: 688 LSIFAFNVASEKFCEFESPPFQQEQG------RLKGALRVIEELLCFIDMKEFDEFEMWV 849
            SI  FN  SEKF  F SPP    +        LKG L + E  +        +   +W+
Sbjct: 266 RSILCFNFESEKFQSFPSPPHPHHKRLSITMVELKGFLYICESTV--------NSCVVWL 317

Query: 850 MKDYGVQGSWAKEY 891
           MK YG+  SW + +
Sbjct: 318 MKKYGIGESWTRVF 331


>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 369

 Score =  121 bits (303), Expect = 4e-25
 Identities = 95/347 (27%), Positives = 163/347 (46%), Gaps = 8/347 (2%)
 Frame = +1

Query: 34   KLPSDIILDNIFSSLPLKSLSQCRWVCKTW-YRFIHHPRFAQIHYQMAIQNHCSPCLGLF 210
            +LP +II+D I S LP+K L Q + VC+TW Y     P FA++H +  +Q        L 
Sbjct: 7    QLPFEIIID-ILSRLPVKHLIQFKCVCRTWQYLISSDPEFAKLHLERVLQVTNVHLHRLL 65

Query: 211  LEYPRNELRLIDHQVFDNLKTSVVSSDVETYPLVEFGFSYLQIIGVVNGLVC--FGEDHH 384
            L    +  + +D + + +   + +  +   +P+        + +G  NGL+   FG DH 
Sbjct: 66   LS--ADPFQSVDMEAYCDADDNFLIRE-HRFPVRNPEDDDFEFVGSCNGLISAVFGSDH- 121

Query: 385  RSYLPRKYIIYNPITGEHFQLPEDTCIFTDIDFAALGFDSAANEYKVIR----IRDDHRG 552
                  +  ++NP TGE  +LP  T    D  F   G+DS  ++YK++R       +   
Sbjct: 122  ------EITVWNPSTGESRKLPAPTSSTEDKLFYGFGYDSKLDDYKIVRGASSASCNEVQ 175

Query: 553  AEIFTLGTTRWRRVEDHVPKIYKTQPFSVLVNGNLHWISSEQDGPLSIFAFNVASEKFCE 732
             E+F L   RWR +++    + + Q  ++ +NG LHW+  + +  L I + ++A EKF E
Sbjct: 176  MEVFNLKGNRWRAIQNLHCNV-RFQGSAIALNGILHWLVDQLNEGLMIVSLDLAEEKFLE 234

Query: 733  F-ESPPFQQEQGRLKGALRVIEELLCFIDMKEFDEFEMWVMKDYGVQGSWAKEYKFNAQV 909
                P +  E    +  L+V+ + L          FE W +K YG + SW K + FN+  
Sbjct: 235  MVVLPDYVTENWGTE--LKVLGDSLSVCSSSHTTNFEAWTVKGYGSKASWLKLFSFNSDP 292

Query: 910  LNCTLHNYTCGQNVFKLKNGEFLVKYGPKDFGYYDAKQRTCQPVLLP 1050
            L    +       ++  KNG  L+ Y   +   Y+ K++T +   +P
Sbjct: 293  LPGCKYWLNV---LWVAKNGNVLLNYEGLEIIVYNPKEQTLKQFNVP 336