BLASTX nr result
ID: Coptis24_contig00014692
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014692 (765 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides] 299 5e-79 ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|2... 294 2e-77 ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protei... 289 5e-76 ref|XP_004143269.1| PREDICTED: thylakoid lumenal 15.0 kDa protei... 289 5e-76 ref|XP_002519497.1| conserved hypothetical protein [Ricinus comm... 285 6e-75 >gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides] Length = 220 Score = 299 bits (765), Expect = 5e-79 Identities = 153/222 (68%), Positives = 174/222 (78%), Gaps = 3/222 (1%) Frame = +3 Query: 21 MAFPVLVRPSSLHFQTNSLNKIFSSP---TRSVLKSPKYFTRWVSDIPAKSLNXXXXXXX 191 MAFP L PSSL +T + + P + +++P FT+WV D +KSLN Sbjct: 1 MAFPHL--PSSLALKTTCRSALTPVPITVSSRPIQNPAKFTKWVLDFRSKSLNFAFSGAL 58 Query: 192 XXXXXXXXXXXXEAKVGVNKPELLPKEFSPVIDVAGFLTPGQEIRLAQEIADLEKDTGFK 371 +AKVGVNKPELLPKEF+ VIDVAGFL+ GQE RLA+EI+D+EKDTGFK Sbjct: 59 ALGLSLPGVGVADAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFK 118 Query: 372 LRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLA 551 LRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNILNFNVGA+VDLDIPRSFWSRLA Sbjct: 119 LRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNILNFNVGASVDLDIPRSFWSRLA 178 Query: 552 GKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 677 GKYGNMFYWKEKGED+SIEAAVMAISSCL+EPVG NCSEV+ Sbjct: 179 GKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCSEVK 220 >ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|222867520|gb|EEF04651.1| predicted protein [Populus trichocarpa] Length = 215 Score = 294 bits (752), Expect = 2e-77 Identities = 153/222 (68%), Positives = 173/222 (77%), Gaps = 3/222 (1%) Frame = +3 Query: 21 MAFPVLVRPSSLHFQTNSLNKIFSSP---TRSVLKSPKYFTRWVSDIPAKSLNXXXXXXX 191 MAFP L PSSL +T + + P + +++P FT WV D +KSLN Sbjct: 1 MAFPHL--PSSLALKTTCRSALTPVPITVSSRPIQNPAKFTNWVLDFRSKSLNFAFSGAL 58 Query: 192 XXXXXXXXXXXXEAKVGVNKPELLPKEFSPVIDVAGFLTPGQEIRLAQEIADLEKDTGFK 371 +AKVGVNKPELLPKEF+ VIDVAGFL+ GQE RLA+EI+D+EKDTGFK Sbjct: 59 ALGVGVA-----DAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFK 113 Query: 372 LRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLA 551 LRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNILNFNVGA+VDLDIPRSFWSRLA Sbjct: 114 LRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNILNFNVGASVDLDIPRSFWSRLA 173 Query: 552 GKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 677 GKYGNMFYWKEKGED+SIEAAVMAISSCL+EPVG NCSEV+ Sbjct: 174 GKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCSEVK 215 >ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucumis sativus] Length = 228 Score = 289 bits (739), Expect = 5e-76 Identities = 147/197 (74%), Positives = 161/197 (81%), Gaps = 2/197 (1%) Frame = +3 Query: 93 SPTRSVLKSPKY--FTRWVSDIPAKSLNXXXXXXXXXXXXXXXXXXXEAKVGVNKPELLP 266 SP S L S KY F+ + +P KSL+ +AKVGVNKPELLP Sbjct: 32 SPPSSPLPSQKYTDFSHRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKPELLP 91 Query: 267 KEFSPVIDVAGFLTPGQEIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDR 446 KEF+ VIDVAGFL+ GQEIRL QEIAD+EKDTG+KLRVLAQNYP TPGLAIKDFWQVDDR Sbjct: 92 KEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDR 151 Query: 447 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAI 626 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGEDSSIE+AVMAI Sbjct: 152 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAI 211 Query: 627 SSCLKEPVGAGNCSEVQ 677 SSCL+EPVGA NCSE++ Sbjct: 212 SSCLREPVGANNCSEIK 228 >ref|XP_004143269.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like [Cucumis sativus] Length = 228 Score = 289 bits (739), Expect = 5e-76 Identities = 147/197 (74%), Positives = 161/197 (81%), Gaps = 2/197 (1%) Frame = +3 Query: 93 SPTRSVLKSPKY--FTRWVSDIPAKSLNXXXXXXXXXXXXXXXXXXXEAKVGVNKPELLP 266 SP S L S KY F+ + +P KSL+ +AKVGVNKPELLP Sbjct: 32 SPPSSPLPSQKYTDFSHRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKPELLP 91 Query: 267 KEFSPVIDVAGFLTPGQEIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDR 446 KEF+ VIDVAGFL+ GQEIRL QEIAD+EKDTG+KLRVLAQNYP TPGLAIKDFWQVDDR Sbjct: 92 KEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDR 151 Query: 447 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAI 626 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGEDSSIE+AVMAI Sbjct: 152 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAI 211 Query: 627 SSCLKEPVGAGNCSEVQ 677 SSCL+EPVGA NCSE++ Sbjct: 212 SSCLREPVGANNCSEIK 228 >ref|XP_002519497.1| conserved hypothetical protein [Ricinus communis] gi|223541360|gb|EEF42911.1| conserved hypothetical protein [Ricinus communis] Length = 256 Score = 285 bits (730), Expect = 6e-75 Identities = 148/215 (68%), Positives = 165/215 (76%), Gaps = 6/215 (2%) Frame = +3 Query: 48 SSLHFQTNSLNKIF------SSPTRSVLKSPKYFTRWVSDIPAKSLNXXXXXXXXXXXXX 209 SSL + SL F SSP + S K F+ WV D +K+L Sbjct: 8 SSLTLRGTSLRPAFKIPVTASSPIFPIQNSTK-FSNWVVDFRSKTLKFLLSGALTLGLSL 66 Query: 210 XXXXXXEAKVGVNKPELLPKEFSPVIDVAGFLTPGQEIRLAQEIADLEKDTGFKLRVLAQ 389 EAKVGVNKPELLPKEF+ VIDVAGFL+ GQE RLAQEI D+EKDTGFKLRVLAQ Sbjct: 67 SGVEFAEAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAQEIQDIEKDTGFKLRVLAQ 126 Query: 390 NYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNM 569 NYPDTPGLAIKDFW+VDDRTIVFVADPTFGNILNFNVGA++DLDIPRSFWSRLAGKYGN+ Sbjct: 127 NYPDTPGLAIKDFWRVDDRTIVFVADPTFGNILNFNVGASIDLDIPRSFWSRLAGKYGNI 186 Query: 570 FYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEV 674 FYWKEKGED+SIE+AVMAIS+CL+EPVG NCSE+ Sbjct: 187 FYWKEKGEDASIESAVMAISNCLREPVGPNNCSEL 221