BLASTX nr result

ID: Coptis24_contig00014692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014692
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]      299   5e-79
ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|2...   294   2e-77
ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protei...   289   5e-76
ref|XP_004143269.1| PREDICTED: thylakoid lumenal 15.0 kDa protei...   289   5e-76
ref|XP_002519497.1| conserved hypothetical protein [Ricinus comm...   285   6e-75

>gb|ABK96655.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 220

 Score =  299 bits (765), Expect = 5e-79
 Identities = 153/222 (68%), Positives = 174/222 (78%), Gaps = 3/222 (1%)
 Frame = +3

Query: 21  MAFPVLVRPSSLHFQTNSLNKIFSSP---TRSVLKSPKYFTRWVSDIPAKSLNXXXXXXX 191
           MAFP L  PSSL  +T   + +   P   +   +++P  FT+WV D  +KSLN       
Sbjct: 1   MAFPHL--PSSLALKTTCRSALTPVPITVSSRPIQNPAKFTKWVLDFRSKSLNFAFSGAL 58

Query: 192 XXXXXXXXXXXXEAKVGVNKPELLPKEFSPVIDVAGFLTPGQEIRLAQEIADLEKDTGFK 371
                       +AKVGVNKPELLPKEF+ VIDVAGFL+ GQE RLA+EI+D+EKDTGFK
Sbjct: 59  ALGLSLPGVGVADAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFK 118

Query: 372 LRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLA 551
           LRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNILNFNVGA+VDLDIPRSFWSRLA
Sbjct: 119 LRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNILNFNVGASVDLDIPRSFWSRLA 178

Query: 552 GKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 677
           GKYGNMFYWKEKGED+SIEAAVMAISSCL+EPVG  NCSEV+
Sbjct: 179 GKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCSEVK 220


>ref|XP_002322890.1| predicted protein [Populus trichocarpa] gi|222867520|gb|EEF04651.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  294 bits (752), Expect = 2e-77
 Identities = 153/222 (68%), Positives = 173/222 (77%), Gaps = 3/222 (1%)
 Frame = +3

Query: 21  MAFPVLVRPSSLHFQTNSLNKIFSSP---TRSVLKSPKYFTRWVSDIPAKSLNXXXXXXX 191
           MAFP L  PSSL  +T   + +   P   +   +++P  FT WV D  +KSLN       
Sbjct: 1   MAFPHL--PSSLALKTTCRSALTPVPITVSSRPIQNPAKFTNWVLDFRSKSLNFAFSGAL 58

Query: 192 XXXXXXXXXXXXEAKVGVNKPELLPKEFSPVIDVAGFLTPGQEIRLAQEIADLEKDTGFK 371
                       +AKVGVNKPELLPKEF+ VIDVAGFL+ GQE RLA+EI+D+EKDTGFK
Sbjct: 59  ALGVGVA-----DAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAEEISDIEKDTGFK 113

Query: 372 LRVLAQNYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLA 551
           LRVLAQNYPDTPGLAI+DFWQVDDRT+VFVADP FGNILNFNVGA+VDLDIPRSFWSRLA
Sbjct: 114 LRVLAQNYPDTPGLAIRDFWQVDDRTVVFVADPNFGNILNFNVGASVDLDIPRSFWSRLA 173

Query: 552 GKYGNMFYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEVQ 677
           GKYGNMFYWKEKGED+SIEAAVMAISSCL+EPVG  NCSEV+
Sbjct: 174 GKYGNMFYWKEKGEDASIEAAVMAISSCLREPVGPNNCSEVK 215


>ref|XP_004156281.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like
           [Cucumis sativus]
          Length = 228

 Score =  289 bits (739), Expect = 5e-76
 Identities = 147/197 (74%), Positives = 161/197 (81%), Gaps = 2/197 (1%)
 Frame = +3

Query: 93  SPTRSVLKSPKY--FTRWVSDIPAKSLNXXXXXXXXXXXXXXXXXXXEAKVGVNKPELLP 266
           SP  S L S KY  F+  +  +P KSL+                   +AKVGVNKPELLP
Sbjct: 32  SPPSSPLPSQKYTDFSHRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKPELLP 91

Query: 267 KEFSPVIDVAGFLTPGQEIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDR 446
           KEF+ VIDVAGFL+ GQEIRL QEIAD+EKDTG+KLRVLAQNYP TPGLAIKDFWQVDDR
Sbjct: 92  KEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDR 151

Query: 447 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAI 626
           TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGEDSSIE+AVMAI
Sbjct: 152 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAI 211

Query: 627 SSCLKEPVGAGNCSEVQ 677
           SSCL+EPVGA NCSE++
Sbjct: 212 SSCLREPVGANNCSEIK 228


>ref|XP_004143269.1| PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic-like
           [Cucumis sativus]
          Length = 228

 Score =  289 bits (739), Expect = 5e-76
 Identities = 147/197 (74%), Positives = 161/197 (81%), Gaps = 2/197 (1%)
 Frame = +3

Query: 93  SPTRSVLKSPKY--FTRWVSDIPAKSLNXXXXXXXXXXXXXXXXXXXEAKVGVNKPELLP 266
           SP  S L S KY  F+  +  +P KSL+                   +AKVGVNKPELLP
Sbjct: 32  SPPSSPLPSQKYTDFSHRLLHLPQKSLSFVLSGALALGITLSGVGFADAKVGVNKPELLP 91

Query: 267 KEFSPVIDVAGFLTPGQEIRLAQEIADLEKDTGFKLRVLAQNYPDTPGLAIKDFWQVDDR 446
           KEF+ VIDVAGFL+ GQEIRL QEIAD+EKDTG+KLRVLAQNYP TPGLAIKDFWQVDDR
Sbjct: 92  KEFTSVIDVAGFLSDGQEIRLKQEIADIEKDTGYKLRVLAQNYPVTPGLAIKDFWQVDDR 151

Query: 447 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNMFYWKEKGEDSSIEAAVMAI 626
           TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGN+FYWKEKGEDSSIE+AVMAI
Sbjct: 152 TIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNIFYWKEKGEDSSIESAVMAI 211

Query: 627 SSCLKEPVGAGNCSEVQ 677
           SSCL+EPVGA NCSE++
Sbjct: 212 SSCLREPVGANNCSEIK 228


>ref|XP_002519497.1| conserved hypothetical protein [Ricinus communis]
           gi|223541360|gb|EEF42911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  285 bits (730), Expect = 6e-75
 Identities = 148/215 (68%), Positives = 165/215 (76%), Gaps = 6/215 (2%)
 Frame = +3

Query: 48  SSLHFQTNSLNKIF------SSPTRSVLKSPKYFTRWVSDIPAKSLNXXXXXXXXXXXXX 209
           SSL  +  SL   F      SSP   +  S K F+ WV D  +K+L              
Sbjct: 8   SSLTLRGTSLRPAFKIPVTASSPIFPIQNSTK-FSNWVVDFRSKTLKFLLSGALTLGLSL 66

Query: 210 XXXXXXEAKVGVNKPELLPKEFSPVIDVAGFLTPGQEIRLAQEIADLEKDTGFKLRVLAQ 389
                 EAKVGVNKPELLPKEF+ VIDVAGFL+ GQE RLAQEI D+EKDTGFKLRVLAQ
Sbjct: 67  SGVEFAEAKVGVNKPELLPKEFTTVIDVAGFLSDGQEKRLAQEIQDIEKDTGFKLRVLAQ 126

Query: 390 NYPDTPGLAIKDFWQVDDRTIVFVADPTFGNILNFNVGATVDLDIPRSFWSRLAGKYGNM 569
           NYPDTPGLAIKDFW+VDDRTIVFVADPTFGNILNFNVGA++DLDIPRSFWSRLAGKYGN+
Sbjct: 127 NYPDTPGLAIKDFWRVDDRTIVFVADPTFGNILNFNVGASIDLDIPRSFWSRLAGKYGNI 186

Query: 570 FYWKEKGEDSSIEAAVMAISSCLKEPVGAGNCSEV 674
           FYWKEKGED+SIE+AVMAIS+CL+EPVG  NCSE+
Sbjct: 187 FYWKEKGEDASIESAVMAISNCLREPVGPNNCSEL 221


Top