BLASTX nr result

ID: Coptis24_contig00014686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014686
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280011.2| PREDICTED: uncharacterized protein LOC100249...   157   7e-37
gb|AFK35111.1| unknown [Lotus japonicus]                              148   6e-34
ref|XP_003554915.1| PREDICTED: uncharacterized protein LOC100801...   143   1e-32
ref|NP_001143831.1| hypothetical protein [Zea mays] gi|195627926...   143   2e-32
ref|NP_001172577.1| Os01g0763650 [Oryza sativa Japonica Group] g...   142   2e-32

>ref|XP_002280011.2| PREDICTED: uncharacterized protein LOC100249838 [Vitis vinifera]
           gi|296082204|emb|CBI21209.3| unnamed protein product
           [Vitis vinifera]
          Length = 151

 Score =  157 bits (398), Expect = 7e-37
 Identities = 84/152 (55%), Positives = 107/152 (70%), Gaps = 5/152 (3%)
 Frame = -2

Query: 477 ISREGAAS--LLNPGIHCFNCKQSTRSFSGTTHFQPRGIGKNGYTRYPFYPRIQQQEHQV 304
           ++ EGA    L + G+  FN K +++        +P  I     + Y   P+I  Q    
Sbjct: 2   VAVEGALGKQLFSNGVQNFNSKLASKPQIQVP--RPETITVYQTSFYLRVPKISTQHRDA 59

Query: 303 ---YAIRRRRSNVQTDTYVLIEPGKNEEFVSEEELKSRLKNWLENWPGSTLPPDLARYRT 133
              YA+RRRR+  QT+TYVL+EPGK+EEFVS+EELK+RLK WLENWPG  LPPDLA+++T
Sbjct: 60  VKSYAMRRRRAYSQTETYVLMEPGKDEEFVSQEELKARLKGWLENWPGKALPPDLAKFQT 119

Query: 132 IDDAVSHLVKSVCELEIDGDVGSIQWYEVRLE 37
           IDDAV +LVK+VCELEIDGDVGSIQWYE+RLE
Sbjct: 120 IDDAVMYLVKAVCELEIDGDVGSIQWYEIRLE 151


>gb|AFK35111.1| unknown [Lotus japonicus]
          Length = 151

 Score =  148 bits (373), Expect = 6e-34
 Identities = 69/104 (66%), Positives = 86/104 (82%)
 Frame = -2

Query: 348 RYPFYPRIQQQEHQVYAIRRRRSNVQTDTYVLIEPGKNEEFVSEEELKSRLKNWLENWPG 169
           R P    + +   +++A+RRRR+N +T+TYVL+EPG++E+FVSEEELK+ LK  L NWPG
Sbjct: 48  RLPQIAGVSKSNTKLFALRRRRANERTETYVLLEPGEDEKFVSEEELKATLKERLTNWPG 107

Query: 168 STLPPDLARYRTIDDAVSHLVKSVCELEIDGDVGSIQWYEVRLE 37
             LPPDLARY TID+AVS LV+SVCELEIDGDVGS+QWYEVRLE
Sbjct: 108 KALPPDLARYETIDEAVSFLVRSVCELEIDGDVGSVQWYEVRLE 151


>ref|XP_003554915.1| PREDICTED: uncharacterized protein LOC100801516 [Glycine max]
          Length = 152

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/92 (75%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
 Frame = -2

Query: 309 QVYAIRRRR-SNVQTDTYVLIEPGKNEEFVSEEELKSRLKNWLENWPGSTLPPDLARYRT 133
           +V+A+RRRR +N +T+TYVL+EPG++E FVSEEELK+ LK  LENWPG  LPPDL+RY  
Sbjct: 61  KVFALRRRRRANERTETYVLLEPGQDERFVSEEELKATLKELLENWPGKVLPPDLSRYEN 120

Query: 132 IDDAVSHLVKSVCELEIDGDVGSIQWYEVRLE 37
           IDDAVS LV+SVCELEIDGDVGSIQWYEVRLE
Sbjct: 121 IDDAVSFLVRSVCELEIDGDVGSIQWYEVRLE 152


>ref|NP_001143831.1| hypothetical protein [Zea mays] gi|195627926|gb|ACG35793.1|
           hypothetical protein [Zea mays]
           gi|223948371|gb|ACN28269.1| unknown [Zea mays]
           gi|414880396|tpg|DAA57527.1| TPA: hypothetical protein
           ZEAMMB73_956194 [Zea mays]
          Length = 171

 Score =  143 bits (360), Expect = 2e-32
 Identities = 64/99 (64%), Positives = 84/99 (84%)
 Frame = -2

Query: 333 PRIQQQEHQVYAIRRRRSNVQTDTYVLIEPGKNEEFVSEEELKSRLKNWLENWPGSTLPP 154
           PR++    QV A RRRR+++Q+DTYVL+EPG +E FVS EEL+ RLK WL+NWP  TLPP
Sbjct: 73  PRMRGHGEQVCATRRRRADIQSDTYVLMEPGMDEAFVSREELEERLKGWLKNWPRDTLPP 132

Query: 153 DLARYRTIDDAVSHLVKSVCELEIDGDVGSIQWYEVRLE 37
           DLAR+ T+D+AVS+LV+SVC LEIDGDVGS++WY+V+L+
Sbjct: 133 DLARFGTVDEAVSYLVRSVCVLEIDGDVGSVEWYQVQLD 171


>ref|NP_001172577.1| Os01g0763650 [Oryza sativa Japonica Group]
           gi|57899557|dbj|BAD87136.1| unknown protein [Oryza
           sativa Japonica Group] gi|57900366|dbj|BAD87356.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|222619293|gb|EEE55425.1| hypothetical protein
           OsJ_03554 [Oryza sativa Japonica Group]
           gi|255673708|dbj|BAH91307.1| Os01g0763650 [Oryza sativa
           Japonica Group]
          Length = 151

 Score =  142 bits (359), Expect = 2e-32
 Identities = 63/90 (70%), Positives = 81/90 (90%)
 Frame = -2

Query: 306 VYAIRRRRSNVQTDTYVLIEPGKNEEFVSEEELKSRLKNWLENWPGSTLPPDLARYRTID 127
           V A RRRR+++Q++TYVL+EPG+ EEFVS+EEL+ RL+ WLE WPG  LPPDLAR+ T+D
Sbjct: 62  VCAARRRRADIQSETYVLMEPGEEEEFVSKEELEGRLRGWLERWPGGELPPDLARFDTVD 121

Query: 126 DAVSHLVKSVCELEIDGDVGSIQWYEVRLE 37
           DAVS+LV+SVCELEIDG+VGS+QWY+V+LE
Sbjct: 122 DAVSYLVRSVCELEIDGEVGSVQWYQVQLE 151


Top