BLASTX nr result

ID: Coptis24_contig00014680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014680
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316595.1| predicted protein [Populus trichocarpa] gi|1...   109   2e-41
ref|XP_002869829.1| hypothetical protein ARALYDRAFT_492636 [Arab...   108   1e-40
ref|NP_193962.1| uncharacterized protein [Arabidopsis thaliana] ...   108   1e-40
ref|XP_003635509.1| PREDICTED: brain protein 44-like, partial [V...   103   2e-40
emb|CBI14845.3| unnamed protein product [Vitis vinifera]              103   2e-40

>ref|XP_002316595.1| predicted protein [Populus trichocarpa] gi|118483180|gb|ABK93494.1|
           unknown [Populus trichocarpa]
           gi|222859660|gb|EEE97207.1| predicted protein [Populus
           trichocarpa]
          Length = 108

 Score =  109 bits (272), Expect(2) = 2e-41
 Identities = 49/55 (89%), Positives = 50/55 (90%)
 Frame = -2

Query: 285 MATSKLQKLWNHPAGPKTIHFWAPTFKWGISIANIVDFAKPPEKLSYPQTPANSC 121
           MATSKLQ LWNHPAGPKTIHFWAPTFKWGISIANI DFAKPPEKLSYPQ  A +C
Sbjct: 1   MATSKLQALWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTC 55



 Score = 85.1 bits (209), Expect(2) = 2e-41
 Identities = 39/45 (86%), Positives = 41/45 (91%)
 Frame = -3

Query: 137 PQQIVVTCTGVIWARYSTVIIPKNWNLVSVNLAMAGTGIYQLSRK 3
           PQQI VTCTGVIW+RYSTVI PKNWNL SVN+AMA TGIYQLSRK
Sbjct: 48  PQQIAVTCTGVIWSRYSTVITPKNWNLFSVNVAMAATGIYQLSRK 92


>ref|XP_002869829.1| hypothetical protein ARALYDRAFT_492636 [Arabidopsis lyrata subsp.
           lyrata] gi|297315665|gb|EFH46088.1| hypothetical protein
           ARALYDRAFT_492636 [Arabidopsis lyrata subsp. lyrata]
          Length = 108

 Score =  108 bits (270), Expect(2) = 1e-40
 Identities = 48/55 (87%), Positives = 50/55 (90%)
 Frame = -2

Query: 285 MATSKLQKLWNHPAGPKTIHFWAPTFKWGISIANIVDFAKPPEKLSYPQTPANSC 121
           MATSKLQ +WNHPAGPKTIHFWAPTFKWGISIANI DFAKPPEKLSYPQ  A +C
Sbjct: 1   MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTC 55



 Score = 83.2 bits (204), Expect(2) = 1e-40
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = -3

Query: 137 PQQIVVTCTGVIWARYSTVIIPKNWNLVSVNLAMAGTGIYQLSRK 3
           PQQI VTCTGVIW+RYS VI PKNWNL SVN+AMAGTGIYQL+RK
Sbjct: 48  PQQIAVTCTGVIWSRYSMVINPKNWNLFSVNVAMAGTGIYQLARK 92


>ref|NP_193962.1| uncharacterized protein [Arabidopsis thaliana]
           gi|11762164|gb|AAG40360.1|AF325008_1 AT4g22310
           [Arabidopsis thaliana] gi|2832681|emb|CAA16781.1|
           putative protein [Arabidopsis thaliana]
           gi|7269077|emb|CAB79186.1| putative protein [Arabidopsis
           thaliana] gi|14532636|gb|AAK64046.1| unknown protein
           [Arabidopsis thaliana] gi|19310765|gb|AAL85113.1|
           unknown protein [Arabidopsis thaliana]
           gi|332659191|gb|AEE84591.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 108

 Score =  108 bits (270), Expect(2) = 1e-40
 Identities = 48/55 (87%), Positives = 50/55 (90%)
 Frame = -2

Query: 285 MATSKLQKLWNHPAGPKTIHFWAPTFKWGISIANIVDFAKPPEKLSYPQTPANSC 121
           MATSKLQ +WNHPAGPKTIHFWAPTFKWGISIANI DFAKPPEKLSYPQ  A +C
Sbjct: 1   MATSKLQAIWNHPAGPKTIHFWAPTFKWGISIANIADFAKPPEKLSYPQQIAVTC 55



 Score = 83.2 bits (204), Expect(2) = 1e-40
 Identities = 38/45 (84%), Positives = 41/45 (91%)
 Frame = -3

Query: 137 PQQIVVTCTGVIWARYSTVIIPKNWNLVSVNLAMAGTGIYQLSRK 3
           PQQI VTCTGVIW+RYS VI PKNWNL SVN+AMAGTGIYQL+RK
Sbjct: 48  PQQIAVTCTGVIWSRYSMVINPKNWNLFSVNVAMAGTGIYQLARK 92


>ref|XP_003635509.1| PREDICTED: brain protein 44-like, partial [Vitis vinifera]
          Length = 102

 Score =  103 bits (258), Expect(2) = 2e-40
 Identities = 45/55 (81%), Positives = 47/55 (85%)
 Frame = -2

Query: 285 MATSKLQKLWNHPAGPKTIHFWAPTFKWGISIANIVDFAKPPEKLSYPQTPANSC 121
           MA SKLQ  WNHPAGPKTIHFWAPTFKWGISIAN+ DF KPPEKLSYPQ  A +C
Sbjct: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANVADFTKPPEKLSYPQQIAVTC 55



 Score = 87.0 bits (214), Expect(2) = 2e-40
 Identities = 40/45 (88%), Positives = 41/45 (91%)
 Frame = -3

Query: 137 PQQIVVTCTGVIWARYSTVIIPKNWNLVSVNLAMAGTGIYQLSRK 3
           PQQI VTCTGVIW RYSTVI PKNWNL SVN+AMAGTGIYQLSRK
Sbjct: 48  PQQIAVTCTGVIWTRYSTVITPKNWNLFSVNVAMAGTGIYQLSRK 92


>emb|CBI14845.3| unnamed protein product [Vitis vinifera]
          Length = 104

 Score =  103 bits (258), Expect(2) = 2e-40
 Identities = 45/55 (81%), Positives = 47/55 (85%)
 Frame = -2

Query: 285 MATSKLQKLWNHPAGPKTIHFWAPTFKWGISIANIVDFAKPPEKLSYPQTPANSC 121
           MA SKLQ  WNHPAGPKTIHFWAPTFKWGISIAN+ DF KPPEKLSYPQ  A +C
Sbjct: 1   MAASKLQAFWNHPAGPKTIHFWAPTFKWGISIANVADFTKPPEKLSYPQQIAVTC 55



 Score = 87.0 bits (214), Expect(2) = 2e-40
 Identities = 40/45 (88%), Positives = 41/45 (91%)
 Frame = -3

Query: 137 PQQIVVTCTGVIWARYSTVIIPKNWNLVSVNLAMAGTGIYQLSRK 3
           PQQI VTCTGVIW RYSTVI PKNWNL SVN+AMAGTGIYQLSRK
Sbjct: 48  PQQIAVTCTGVIWTRYSTVITPKNWNLFSVNVAMAGTGIYQLSRK 92


Top