BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014677
         (4068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519032.1| double-stranded RNA binding protein, putativ...   959   0.0  
ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|2...   942   0.0  
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...   917   0.0  
emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]   914   0.0  
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...   909   0.0  

>ref|XP_002519032.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223541695|gb|EEF43243.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 978

 Score =  959 bits (2479), Expect = 0.0
 Identities = 546/981 (55%), Positives = 659/981 (67%), Gaps = 53/981 (5%)
 Frame = +1

Query: 154  SVVYHGKNLLGEVDIHPIISLKHQKMN------------------FKEIRISHFSKPSER 279
            SVVY G  LLGEV+I+     K Q+                     K IRISHFS+ SER
Sbjct: 4    SVVYKGDELLGEVEIYAQQEQKLQQQEELQEQEQELKKKRVIDEILKGIRISHFSQASER 63

Query: 280  CTPLSVLHTISNEGVSFKMESKGDLMLGS----LHSTLLTENKTAIMLL-GEEELHLVAM 444
            C PL+VLHTI+  G+ FKMESK  + L +    LHS+ + E+KTA++LL G EELHLVAM
Sbjct: 64   CPPLAVLHTITTNGICFKMESKNSVSLDTPLHLLHSSCIQESKTAVVLLQGGEELHLVAM 123

Query: 445  SSRNNSEQNFYFWCFIVGNGRYASCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDAL 624
             SRN+  Q   FW F + +G Y SCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRI+AL
Sbjct: 124  FSRNDERQYPCFWAFNISSGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIEAL 183

Query: 625  QRKISTEIDRHRIDGMLTEIKRYNDDKAILKQYVENDQFVDDGLIFKIQHEVVPALSDNY 804
            QRKISTE+D  RI GML+E+KRY DDK ILKQYV+NDQ V++G + K Q EVVPALSDN+
Sbjct: 184  QRKISTELDPQRISGMLSEVKRYQDDKTILKQYVDNDQVVENGRVIKTQFEVVPALSDNH 243

Query: 805  PAIIRPLIRLPEKNIILTRINPTVRDTSVLVKLRPAWEDLRNYLTARGRKRFEVYVCTMA 984
              I+RPLIRL E+NIILTRINP +RDTSVLV+LRPAWE+LR+YLTARGRKRFEVYVCTMA
Sbjct: 244  QTIVRPLIRLQERNIILTRINPQIRDTSVLVRLRPAWEELRSYLTARGRKRFEVYVCTMA 303

Query: 985  EKDYALEMWRLLDPGLNLINSTELLDRIVCVRAGSRKSLFNVFHDGICHPKMALVIDDRL 1164
            E+DYALEMWRLLDP  NLINS ELLDRIVCV++G RKSLFNVF DGICHPKMALVIDDRL
Sbjct: 304  ERDYALEMWRLLDPESNLINSKELLDRIVCVKSGLRKSLFNVFQDGICHPKMALVIDDRL 363

Query: 1165 KVWDEKDQLRVHVVPPFAPYYAPQAEVNNTIPVLCVARNVACNVRGSFFKEFDECILQRL 1344
            KVWDEKDQ RVHVVP FAPYYAPQAE NN +PVLCVARNVACNVRG FFKEFDE +LQR+
Sbjct: 364  KVWDEKDQPRVHVVPAFAPYYAPQAEANNAVPVLCVARNVACNVRGGFFKEFDEGLLQRI 423

Query: 1345 SDVSYEDDAPEIPS-PDVSNYLMSEVNNAGEPEDDTFGS--NKDPVRFEGISDVEFKRRL 1515
             ++S+EDD  +IPS PDVSNYL+        PEDD F S  N+DP+ F+G++D E ++RL
Sbjct: 424  PEISFEDDMNDIPSPPDVSNYLV--------PEDDAFTSNGNRDPLSFDGMADAEVEKRL 475

Query: 1516 KEAIPA----PLLVNDLNLRLA-PLQLAMATSANIISQPLSQGSLVPFHDKQLPQ---VI 1671
            KEAI      P  V +L+ RL  PLQ  MA+S++ I  P SQ ++V F   QLPQ   ++
Sbjct: 476  KEAISISSAFPSTVANLDARLVPPLQYTMASSSS-IPVPTSQPAVVTFPSMQLPQAAPLV 534

Query: 1672 KVVGN-FPSQNSLQGSPGREEGELPESELDPDTRRRLLILQHGQ--XXXXXXXXXXXXXX 1842
            K +G   PS+ SLQ SP REEGE+PESELDPDTRRRLLILQHGQ                
Sbjct: 535  KPLGQVVPSEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGQDLRDPAPSESPFPVRP 594

Query: 1843 XXXXXXXXXXXXXHGTRPPLEEEMGTRQLSQEVPKKFPREIPLGSETMHSDKHRHSRATS 2022
                          G   P+EEEM  RQL++ V     RE P+ +E MH DKHR    + 
Sbjct: 595  SNSMQVSVPRVQSRGNWVPVEEEMSPRQLNRAV----TREFPMDTEPMHIDKHRPHHPSF 650

Query: 2023 FHGVEGSVSLNRARFEKRKFSKEARQRDDRLRLKQSLSNYHPIRGEGFPWGPLVKRRKDS 2202
            F  VE S+   R   E ++  K A  +DDRLRL Q++SNY  + GE           +D 
Sbjct: 651  FPKVESSIPSERMPHENQRLPKVAPYKDDRLRLNQTMSNYQSLSGEENSLSRSSSSNRDL 710

Query: 2203 HTEHGEDSLLYAETPVRVLQDIAQKCATKVEFKPALVYSTTLQFSVEVWFAGEKIGEGNG 2382
              E  + ++  AETPVRVL +I+ KC  KVEFK +LV S  LQFSVE WFAGE++GEG G
Sbjct: 711  DVE-SDRAVSSAETPVRVLHEISMKCGAKVEFKHSLVNSRDLQFSVEAWFAGERVGEGFG 769

Query: 2383 RTKNEAQHQAGECSIRALANKYLS---PDSQKSESDA-----------VGHSPSFGPHSI 2520
            RT+ EAQ  A E SI+ LAN Y+S   PD+     DA           +GH  SFG   +
Sbjct: 770  RTRREAQSVAAEASIKNLANIYISRAKPDNGALHGDASKYSSANDNGFLGHVNSFGSQPL 829

Query: 2521 AQEDPVPLSISSEPCRFVDPRLGGSKKSEDSVSALKQLCFKEGLALMIKGQPTLSSNTTX 2700
             +++ +  S SSE    +DPRL  SKKS  SV+ALK+ C  EGL +    Q  LSSN+  
Sbjct: 830  PKDEILSYSDSSEQSGLLDPRLESSKKSMSSVNALKEFCMMEGLGVNFLAQTPLSSNSVQ 889

Query: 2701 XXXXXXXXXXXGKVLGKGTGSTWEGAKKQAAEEALDNLKSMFG--TQRRPSSPKMLQTLP 2874
                       G+V+GKG GST++ AK QAAE+AL +L++ FG    +R  SP+ +  +P
Sbjct: 890  NAEVHAQVEIDGQVMGKGIGSTFDEAKMQAAEKALGSLRTTFGRFPPKRQGSPRPVPGMP 949

Query: 2875 TKLLSPESSKVFQWVPSSARY 2937
             K L PE  +V Q +PSSARY
Sbjct: 950  NKHLKPEFPRVLQRMPSSARY 970


>ref|XP_002305017.1| predicted protein [Populus trichocarpa] gi|222847981|gb|EEE85528.1|
            predicted protein [Populus trichocarpa]
          Length = 967

 Score =  942 bits (2435), Expect = 0.0
 Identities = 533/977 (54%), Positives = 651/977 (66%), Gaps = 49/977 (5%)
 Frame = +1

Query: 154  SVVYHGKNLLGEVDIHPIISLKHQKMN-----------FKEIRISHFSKPSERCTPLSVL 300
            SVVY G  LLGEV+I+     + ++ N            KEIRISHFS+ SERC PL+VL
Sbjct: 4    SVVYKGDELLGEVEIYAQEQQQEEEENKNKKKRVIDEIVKEIRISHFSQTSERCPPLAVL 63

Query: 301  HTISNEGVSFKME----------SKGDLMLGSLHSTLLTENKTAIMLLGEEELHLVAMSS 450
            HTI++ GV FKME          S+ +  L  LHS+ + ENKTA+M LG EELHLVAM S
Sbjct: 64   HTITSIGVCFKMEESTSSSTTKISQQESPLHLLHSSCIQENKTAVMHLGGEELHLVAMPS 123

Query: 451  RNNSEQNFYFWCFIVGNGRYASCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQR 630
            R+N  Q+  FW F V  G Y SCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQR
Sbjct: 124  RSNERQHPCFWGFSVAPGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQR 183

Query: 631  KISTEIDRHRIDGMLTEIKRYNDDKAILKQYVENDQFVDDGLIFKIQHEVVPALSDNYPA 810
            KISTE+D  RI GML+E+KRY+DDK ILKQYVENDQ V++G + K Q EVVPALSDN+  
Sbjct: 184  KISTEVDPQRILGMLSEVKRYHDDKNILKQYVENDQVVENGKVIKTQSEVVPALSDNHQP 243

Query: 811  IIRPLIRLPEKNIILTRINPTVRDTSVLVKLRPAWEDLRNYLTARGRKRFEVYVCTMAEK 990
            ++RPLIRL EKNIILTRINP +RDTSVLV+LRPAWEDLR+YLTARGRKRFEVYVCTMAE+
Sbjct: 244  MVRPLIRLQEKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAER 303

Query: 991  DYALEMWRLLDPGLNLINSTELLDRIVCVRAGS--RKSLFNVFHDGICHPKMALVIDDRL 1164
            DYALEMWRLLDP  NLINS ELLDRIVCV++G   RKSLFNVF DGICHPKMALVIDDRL
Sbjct: 304  DYALEMWRLLDPESNLINSKELLDRIVCVKSGKCLRKSLFNVFQDGICHPKMALVIDDRL 363

Query: 1165 KVWDEKDQLRVHVVPPFAPYYAPQAEVNNTIPVLCVARNVACNVRGSFFKEFDECILQRL 1344
            KVWDE+DQ RVHVVP FAPYYAPQAEVNN +PVLCVARNVACNVRG FFKEFDE +LQ++
Sbjct: 364  KVWDERDQSRVHVVPAFAPYYAPQAEVNNAVPVLCVARNVACNVRGGFFKEFDEGLLQKI 423

Query: 1345 SDVSYEDDAPEIPS-PDVSNYLMSEVNNAGEPEDDTFGSNKDPVRFEGISDVEFKRRLKE 1521
             +V+YEDD   IPS PDVSNYL+S      E +      N+D + F+G++D E +R+LK 
Sbjct: 424  PEVAYEDDTDNIPSPPDVSNYLVS------EDDASAVNGNRDQLSFDGMADAEVERQLK- 476

Query: 1522 AIPAPLLVNDLNLRLAPLQLAMATS--ANIISQ----------PLSQGSLVPFHDKQLPQ 1665
                 +    L   +A    +M TS  + + SQ          P SQ S+ PF + Q PQ
Sbjct: 477  -----VFRCSLQYTIASSSSSMPTSQPSMLASQQPMPALQPPKPPSQLSMTPFPNTQFPQ 531

Query: 1666 V---IKVVGN-FPSQNSLQGSPGREEGELPESELDPDTRRRLLILQHGQXXXXXXXXXXX 1833
            V   +K +G   P + SLQ SP REEGE+PESELDPDTRRRLLILQHG            
Sbjct: 532  VAPSVKQLGQVVPPEPSLQSSPAREEGEVPESELDPDTRRRLLILQHGHDSRDNAPSESP 591

Query: 1834 XXXXXXXXXXXXXXXXHGTRPPLEEEMGTRQLSQEVPKKFPREIPLGSETMHSDKHRHSR 2013
                             G+  P+EEEM  RQL+     + PRE PL S+ M+ +KHR   
Sbjct: 592  FPARPSTQVSAPRVQSVGSWVPVEEEMSPRQLN-----RTPREFPLDSDPMNIEKHRTHH 646

Query: 2014 ATSFHGVEGSVSLNRARFEKRKFSKEARQRDDRLRLKQSLSNYHPIRGEGFPWGPLVKRR 2193
             + FH VE ++  +R   E ++  KEA  RDDR++L  S SNY   +GE     PL +  
Sbjct: 647  PSFFHKVESNIPSDRMIHENQRQPKEATYRDDRMKLNHSTSNYPSFQGE----CPLSRSS 702

Query: 2194 KDSHTE-HGEDSLLYAETPVRVLQDIAQKCATKVEFKPALVYSTTLQFSVEVWFAGEKIG 2370
             +   +   E +    ETPV VLQ+IA KC TKVEF+PAL+ ++ LQFS+E WF GEK+G
Sbjct: 703  SNRDLDLESERAFSSTETPVEVLQEIAMKCGTKVEFRPALIATSDLQFSIETWFVGEKVG 762

Query: 2371 EGNGRTKNEAQHQAGECSIRALANKYLSPD------SQKSESDAVGHSPSFGPHSIAQED 2532
            EG G+T+ EAQ QA E SI+ LA K    D         +++  +G   SFG   + +++
Sbjct: 763  EGTGKTRREAQRQAAEGSIKKLAGKISYHDISYYSYPSANDNGFLGDMNSFGNQPLLKDE 822

Query: 2533 PVPLSISSEPCRFVDPRLGGSKKSEDSVSALKQLCFKEGLALMIKGQPTLSSNTTXXXXX 2712
             +  S +SEP R +D RL GSKKS  SV+ALK+ C  EGL +    Q  LS+N+      
Sbjct: 823  NITYSATSEPSRLLDQRLEGSKKSMGSVTALKEFCMTEGLGVNFLAQTPLSTNSIPGEEV 882

Query: 2713 XXXXXXXGKVLGKGTGSTWEGAKKQAAEEALDNLKSMFG--TQRRPSSPKMLQTLPTKLL 2886
                   G+VLGKG G TW+ AK QAAE+AL +L++MFG  T +R  SP+++Q +P K L
Sbjct: 883  HAQVEIDGQVLGKGIGLTWDEAKMQAAEKALGSLRTMFGQYTPKRQGSPRLMQGMPNKRL 942

Query: 2887 SPESSKVFQWVPSSARY 2937
              E  +V Q +PSSARY
Sbjct: 943  KQEFPRVLQRMPSSARY 959


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 954

 Score =  917 bits (2370), Expect = 0.0
 Identities = 522/961 (54%), Positives = 648/961 (67%), Gaps = 33/961 (3%)
 Frame = +1

Query: 154  SVVYHGKNLLGEVDIHPIISLKHQKMNFKEIRISHFSKPSERCTPLSVLHTISNEGVSFK 333
            SVVY G+ ++GEVD++P  +  ++  + KEIRISHFS+PSERC PL+VLHT+++ GV FK
Sbjct: 4    SVVYQGEVVVGEVDVYPEENNNYKNFHVKEIRISHFSQPSERCPPLAVLHTVTSCGVCFK 63

Query: 334  MESKGDLMLG--SLHSTLLTENKTAIMLLGEEELHLVAMSSRNNSEQNFYFWCFIVGNGR 507
            MESK     G   LHS  + ENKTA+M LG EE+HLVAM SRN       FW FIV  G 
Sbjct: 64   MESKTQQQDGLFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRNVDRP--CFWGFIVALGL 121

Query: 508  YASCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKISTEIDRHRIDGMLTEIK 687
            Y SCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKI++E+D  RI GM  E+K
Sbjct: 122  YDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRISGMQAEVK 181

Query: 688  RYNDDKAILKQYVENDQFVDDGLIFKIQHEVVPALSDNYPAIIRPLIRLPEKNIILTRIN 867
            RY DDK ILKQY ENDQ VD+G + K+Q E+VPALSD++  I+RPLIRL +KNIILTRIN
Sbjct: 182  RYQDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIRLQDKNIILTRIN 241

Query: 868  PTVRDTSVLVKLRPAWEDLRNYLTARGRKRFEVYVCTMAEKDYALEMWRLLDPGLNLINS 1047
            P +RDTSVLV+LRPAWEDLR+YLTARGRKRFEVYVCTMAE+DYALEMWRLLDP  NLINS
Sbjct: 242  PQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPDSNLINS 301

Query: 1048 TELLDRIVCVRAGSRKSLFNVFHDGICHPKMALVIDDRLKVWDEKDQLRVHVVPPFAPYY 1227
             ELL RIVCV++G +KSLFNVF DG+CHPKMALVIDDRLKVWDEKDQ RVHVVP FAPYY
Sbjct: 302  KELLGRIVCVKSGLKKSLFNVFQDGLCHPKMALVIDDRLKVWDEKDQPRVHVVPAFAPYY 361

Query: 1228 APQAEVNNTIPVLCVARNVACNVRGSFFKEFDECILQRLSDVSYEDDAPEIPSP-DVSNY 1404
            APQAE +NTIPVLCVARNVACNVRG FFK+FD+ +LQ++  ++YEDD  +IPSP DVSNY
Sbjct: 362  APQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDIPSPPDVSNY 421

Query: 1405 LMSEVNNAGEPEDDTFGSN--KDPVRFEGISDVEFKRRLKEAIPA----PLLVNDLNLRL 1566
            L+SE        DD   SN  +DP  F+G++D E +R+LK+A+ A    P+   +L+ RL
Sbjct: 422  LVSE--------DDGSISNGHRDPFLFDGMADAEVERKLKDALSAASTIPVTTANLDPRL 473

Query: 1567 APLQLAMATSANIISQPLSQGSLVPFHDKQLPQ---VIKVVGNF-PSQNSLQGSPGREEG 1734
              LQ  M  S ++   P +Q S++PF   Q PQ   ++K +G   PS+ SL  SP REEG
Sbjct: 474  TSLQYTMVPSGSV-PPPTAQASMMPFPHVQFPQPATLVKPMGQAAPSEPSLHSSPAREEG 532

Query: 1735 ELPESELDPDTRRRLLILQHGQXXXXXXXXXXXXXXXXXXXXXXXXXXX-HGTRPPLEEE 1911
            E+PESELDPDTRRRLLILQHGQ                             G   P EEE
Sbjct: 533  EVPESELDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQTSAPHVPSSRGVWFPAEEE 592

Query: 1912 MGTRQLSQEVPKKFPREI-PLGSETMHSDKHRHSRATSFHGVEGSVSLNRARFEK-RKFS 2085
            +G++ L++ VPK+FP +  PLG       K R    + F  VE S+S +R   +  ++  
Sbjct: 593  IGSQPLNRVVPKEFPVDSGPLGIA-----KPRPHHPSFFSKVESSISSDRILHDSHQRLP 647

Query: 2086 KEARQRDDRLRLKQSLSNYHPIRGEGFPWGPLVKRRKDSHTEHGEDSLLYAETPVRVLQD 2265
            KE   RDDR RL   LS+Y    G+  P+       +D  +E G  S+L+A+TPV VLQ+
Sbjct: 648  KEMYHRDDRPRLNHMLSSYRSFSGDDIPFSRSFSSHRDLDSESGH-SVLHADTPVAVLQE 706

Query: 2266 IAQKCATKVEFKPALVYSTTLQFSVEVWFAGEKIGEGNGRTKNEAQHQAGECSIRALANK 2445
            IA KC TKV+F  +LV ST LQFS+E WF+G+KIG   GRT+ EAQ++A E SI+ LA+ 
Sbjct: 707  IALKCGTKVDFISSLVASTELQFSMEAWFSGKKIGHRVGRTRKEAQNKAAEDSIKHLADI 766

Query: 2446 YLSPDSQK--------------SESDAVGHSPSFGPHSIAQEDPVPLSISSEPCRFVDPR 2583
            YLS    +              ++S  +G + S G   +++ED    S +S P R +DPR
Sbjct: 767  YLSSAKDEPGSTYGDVSGFPNVNDSGYMGIASSLGNQPLSKEDSASFSTAS-PSRVLDPR 825

Query: 2584 LGGSKKSEDSVSALKQLCFKEGLALMIKGQPT-LSSNTTXXXXXXXXXXXXGKVLGKGTG 2760
            L  SK+S  S+S+LK+LC  EGL +     P  +S+N+             GKV GKG G
Sbjct: 826  LDVSKRSMGSISSLKELCMMEGLDVNFLSAPAPVSTNSVQKDEVHAQVEIDGKVFGKGIG 885

Query: 2761 STWEGAKKQAAEEALDNLKSMFG--TQRRPSSPKMLQTLPTKLLSPESSKVFQWVPSSAR 2934
             TW+ AK QAAE+AL +L+S  G   Q+R SSP+  Q    K L  E  +  Q +PSSAR
Sbjct: 886  LTWDEAKMQAAEKALGSLRSKLGQSIQKRQSSPRPHQGFSNKRLKQEYPRPMQRMPSSAR 945

Query: 2935 Y 2937
            Y
Sbjct: 946  Y 946


>emb|CAN72816.1| hypothetical protein VITISV_004100 [Vitis vinifera]
          Length = 894

 Score =  914 bits (2361), Expect = 0.0
 Identities = 519/941 (55%), Positives = 626/941 (66%), Gaps = 13/941 (1%)
 Frame = +1

Query: 154  SVVYHGKNLLGEVDIHPIISLKHQKMNF-KEIRISHFSKPSERCTPLSVLHTISNEGVSF 330
            S+VY G +++GEV+I+P    ++Q +   KEIRISH+S+PSERC PL+VLHTI++ GV F
Sbjct: 4    SIVYEGDDVVGEVEIYP----QNQGLELMKEIRISHYSQPSERCPPLAVLHTITSCGVCF 59

Query: 331  KMESKG----DLMLGSLHSTLLTENKTAIMLLGEEELHLVAMSSRNNSEQNFYFWCFIVG 498
            KMES      D  L  LHST + ENKTA+M LGEEELHLVAM S+    Q   FW F V 
Sbjct: 60   KMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKKKDGQYPCFWGFNVA 119

Query: 499  NGRYASCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKISTEIDRHRIDGMLT 678
             G Y+SCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKI+TE+D  RI GM+ 
Sbjct: 120  LGLYSSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINTEVDPQRISGMVA 179

Query: 679  EIKRYNDDKAILKQYVENDQFVDDGLIFKIQHEVVPALSDNYPAIIRPLIRLPEKNIILT 858
            E+                   V++G +FK Q E+VPALSDN+  I+RPLIRL EKNIILT
Sbjct: 180  EV-------------------VENGKLFKTQPEIVPALSDNHQPIVRPLIRLQEKNIILT 220

Query: 859  RINPTVRDTSVLVKLRPAWEDLRNYLTARGRKRFEVYVCTMAEKDYALEMWRLLDPGLNL 1038
            RINP +RDTSVLV+LRPAWEDLR+YLTARGRKRFEVYVCTMAE+DYALEMWRLLDP  NL
Sbjct: 221  RINPLIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPESNL 280

Query: 1039 INSTELLDRIVCVRAGSRKSLFNVFHDGICHPKMALVIDDRLKVWDEKDQLRVHVVPPFA 1218
            INS ELLDRIVCV++GSRKSLFNVF DGICHPKMALVIDDRLKVWDEKDQ RVHVVP FA
Sbjct: 281  INSKELLDRIVCVKSGSRKSLFNVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVVPAFA 340

Query: 1219 PYYAPQAEVNNTIPVLCVARNVACNVRGSFFKEFDECILQRLSDVSYEDDAPEIPS-PDV 1395
            PYYAPQAE NN I VLCVARNVACNVRG FFKEFDE +LQR+ ++SYED+  +I S PDV
Sbjct: 341  PYYAPQAEANNAISVLCVARNVACNVRGGFFKEFDEGLLQRIPEISYEDBIKDIRSAPDV 400

Query: 1396 SNYLMSEVNNAGEPEDDTFGSNKDPVRFEGISDVEFKRRLKEAIPAPLLVNDLNLRLA-P 1572
            SNYL+S      E +      N+D   F+G++DVE +R+LK+AI AP  V  L+ RL+ P
Sbjct: 401  SNYLVS------EDDASVSNGNRDQPCFDGMADVEVERKLKDAISAPSTVTSLDPRLSPP 454

Query: 1573 LQLAMATSANIISQPLSQGSLVPFHDKQLPQVIKVVGNFPSQNSLQGSPGREEGELPESE 1752
            LQ A+A S+ +  QP +QGS++PF +KQ PQ   ++     + ++Q SP REEGE+PESE
Sbjct: 455  LQFAVAASSGLAPQPAAQGSIMPFSNKQFPQSASLIKPLAPEPTMQSSPAREEGEVPESE 514

Query: 1753 LDPDTRRRLLILQHGQXXXXXXXXXXXXXXXXXXXXXXXXXXXHGTRPPLEEEMGTRQLS 1932
            LDPDTRRRLLILQHGQ                            G+  P +EEM  RQL+
Sbjct: 515  LDPDTRRRLLILQHGQDTREHASSDPPFPVRPPIQVSVPRVQSRGSWFPADEEMSPRQLN 574

Query: 1933 QEVPKKFPREIPLGSETMHSDKHRHSRATSFHGVEGSVSLNRARFEKRKFSKEARQRDDR 2112
            + VPK+F    PL S+TMH +KHR    + FH VE S S +R   E ++ SKE   RDDR
Sbjct: 575  RAVPKEF----PLDSDTMHIEKHRPHHPSFFHKVESSASSDRILHENQRLSKEVLHRDDR 630

Query: 2113 LRLKQSLSNYHPIRGEGFPWGPLVKRRKDSHTEHGEDSLLYAETPVRVLQDIAQKCATKV 2292
            LRL  SL  YH   GE  P G     R D   E G  +  YAETP   L           
Sbjct: 631  LRLNHSLPGYHSFSGEEVPLGRSSSNR-DLDFESGRGA-PYAETPAVGL----------- 677

Query: 2293 EFKPALVYSTTLQFSVEVWFAGEKIGEGNGRTKNEAQHQAGECSIRALANKYLSPDSQK- 2469
                       L+   EVW  GEKIGEG G+T+ EAQ QA E S+  L+ +YL  D  + 
Sbjct: 678  -----------LRNCNEVWNQGEKIGEGTGKTRREAQCQAAEASLMYLSYRYLHGDVNRF 726

Query: 2470 ---SESDAVGHSPSFGPHSIAQEDPVPLSISSEPCRFVDPRLGGSKKSEDSVSALKQLCF 2640
               S+++ +  + SFG  S  +E  +  S +SE  R +DPRL  SKKS  S+SALK+LC 
Sbjct: 727  PNASDNNFMSDTNSFGYQSFPKEGSMSFSTASESSRLLDPRLESSKKSMGSISALKELCM 786

Query: 2641 KEGLALMIKGQPTLSSNTTXXXXXXXXXXXXGKVLGKGTGSTWEGAKKQAAEEALDNLKS 2820
             EGL +    QP LSSN+T            G+VLGKGTGSTW+ AK QAAE+AL +LKS
Sbjct: 787  MEGLGVEFLSQPPLSSNSTQKEEICAQVEIDGQVLGKGTGSTWDDAKMQAAEKALGSLKS 846

Query: 2821 MFG--TQRRPSSPKMLQTLPTKLLSPESSKVFQWVPSSARY 2937
            M G  +Q+R  SP+ LQ +  +L S E ++  Q  PSS RY
Sbjct: 847  MLGQFSQKRQGSPRSLQGMGKRLKS-EFTRGLQRTPSSGRY 886


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score =  909 bits (2348), Expect = 0.0
 Identities = 515/965 (53%), Positives = 645/965 (66%), Gaps = 37/965 (3%)
 Frame = +1

Query: 154  SVVYHGKNLLGEVDIHPIISLKHQKMNF------KEIRISHFSKPSERCTPLSVLHTISN 315
            SVVY G+ ++GEVD++P  +  +   N+      KEIRISHFS+PSERC PL+VLHT+++
Sbjct: 4    SVVYQGEVVVGEVDVYPEENNNNNNKNYNKNFHVKEIRISHFSQPSERCPPLAVLHTVTS 63

Query: 316  EGVSFKMESKGDLMLG--SLHSTLLTENKTAIMLLGEEELHLVAMSSRNNSEQNFYFWCF 489
             GV FKMESK     G   LHS  + ENKTA+M LG EE+HLVAM SRN+      FW F
Sbjct: 64   CGVCFKMESKTQQQDGLFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRNDDRP--CFWGF 121

Query: 490  IVGNGRYASCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKISTEIDRHRIDG 669
            IV  G Y SCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKI++E+D  RI G
Sbjct: 122  IVTLGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINSEVDPQRISG 181

Query: 670  MLTEIKRYNDDKAILKQYVENDQFVDDGLIFKIQHEVVPALSDNYPAIIRPLIRLPEKNI 849
            M  E+KRY DDK ILKQY ENDQ VD+G + K+Q E+VPALSD++  I+RPLIRL +KNI
Sbjct: 182  MQAEVKRYLDDKNILKQYAENDQVVDNGRVIKVQSEIVPALSDSHQPIVRPLIRLQDKNI 241

Query: 850  ILTRINPTVRDTSVLVKLRPAWEDLRNYLTARGRKRFEVYVCTMAEKDYALEMWRLLDPG 1029
            ILTRINP +RDTSVLV+LRPAWEDLR+YLTARGRKRFEVYVCTMAE+DYALEMWRLLDP 
Sbjct: 242  ILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDPD 301

Query: 1030 LNLINSTELLDRIVCVRAGSRKSLFNVFHDGICHPKMALVIDDRLKVWDEKDQLRVHVVP 1209
             NLINS ELL RIVCV++G +KSLFNVF DG C PKMALVIDDRLKVWDE+DQ RVHVVP
Sbjct: 302  SNLINSKELLGRIVCVKSGLKKSLFNVFQDGSCDPKMALVIDDRLKVWDERDQPRVHVVP 361

Query: 1210 PFAPYYAPQAEVNNTIPVLCVARNVACNVRGSFFKEFDECILQRLSDVSYEDDAPEIPSP 1389
             FAPYYAPQAE +NTIPVLCVARNVACNVRG FFK+FD+ +LQ++  ++YEDD  ++PSP
Sbjct: 362  AFAPYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDVPSP 421

Query: 1390 -DVSNYLMSEVNNAGEPEDDTFGSNKDPVRFEGISDVEFKRRLKEAIPA----PLLVNDL 1554
             DVSNYL+SE       +      N+DP  F+G++D E +R+LK+A+ A    P+   +L
Sbjct: 422  PDVSNYLVSE------DDGSISNGNRDPFLFDGMADAEVERKLKDALAAASTFPVTTANL 475

Query: 1555 NLRLAPLQLAMATSANIISQPLSQGSLVPFHDKQLPQ---VIKVVGNF-PSQNSLQGSPG 1722
            + RL  LQ  M  S ++   P +Q S++PF   Q PQ   ++K +G   PS  SL  SP 
Sbjct: 476  DPRLTSLQYTMVPSGSV-PPPTAQASMMPFPHVQFPQPATLVKPMGQAAPSDPSLHSSPA 534

Query: 1723 REEGELPESELDPDTRRRLLILQHGQXXXXXXXXXXXXXXXXXXXXXXXXXXX-HGTRPP 1899
            REEGE+PESELDPDTRRRLLILQHGQ                             G   P
Sbjct: 535  REEGEVPESELDPDTRRRLLILQHGQDTRDHASAEPPFPVRHPVQASAPRVPSSRGVWFP 594

Query: 1900 LEEEMGTRQLSQEVPKKFPREI-PLGSETMHSDKHRHSRATSFHGVEGSVSLNRARFEK- 2073
            +EEE+G++ L++ VPK+FP +  PLG E     K R    + F+ VE S+S +R   +  
Sbjct: 595  VEEEIGSQPLNRVVPKEFPVDSGPLGIE-----KPRLHHPSFFNKVESSISSDRILHDSH 649

Query: 2074 RKFSKEARQRDDRLRLKQSLSNYHPIRGEGFPWGPLVKRRKDSHTEHGEDSLLYAETPVR 2253
            ++  KE   RDDR RL   LS+Y    G+  P+       +D  +E G  S+L+A+TPV 
Sbjct: 650  QRLPKEMYHRDDRPRLNHMLSSYRSFSGDDIPFSRSSSSHRDLDSESGH-SVLHADTPVA 708

Query: 2254 VLQDIAQKCATKVEFKPALVYSTTLQFSVEVWFAGEKIGEGNGRTKNEAQHQAGECSIRA 2433
            VL +IA KC TKV+F  +LV ST L+FS+E WF+G+KIG G GRT+ EAQ++A + SI  
Sbjct: 709  VLHEIALKCGTKVDFMSSLVASTELKFSLEAWFSGKKIGHGFGRTRKEAQNKAAKDSIEH 768

Query: 2434 LANKYLSPDSQK--------------SESDAVGHSPSFGPHSIAQEDPVPLSISSEPCRF 2571
            LA+ YLS    +              +++  +G + S G   +++ED    S S+ P R 
Sbjct: 769  LADIYLSSAKDEPGSTYGDVSGFPNVNDNGYMGIASSLGNQPLSKEDSASFS-SASPSRA 827

Query: 2572 VDPRLGGSKKSEDSVSALKQLCFKEGLALMIKGQPT-LSSNTTXXXXXXXXXXXXGKVLG 2748
            +DPRL  SK+S  S+SALK+LC  EGL +     P  +S+N+             GK+ G
Sbjct: 828  LDPRLDVSKRSMGSISALKELCMMEGLGVNFLSTPAPVSTNSVQKDEVHAQVEIDGKIFG 887

Query: 2749 KGTGSTWEGAKKQAAEEALDNLKSMFG--TQRRPSSPKMLQTLPTKLLSPESSKVFQWVP 2922
            KG G TW+ AK QAAE+AL NL+S  G   Q+  SSP+  Q    K L  E  +  Q +P
Sbjct: 888  KGIGLTWDEAKMQAAEKALGNLRSKLGQSIQKMQSSPRPHQGFSNKRLKQEYPRTMQRMP 947

Query: 2923 SSARY 2937
            SSARY
Sbjct: 948  SSARY 952