BLASTX nr result

ID: Coptis24_contig00014674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014674
         (676 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28266.3| unnamed protein product [Vitis vinifera]              231   1e-58
ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulato...   231   1e-58
ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulato...   230   2e-58
ref|XP_002523868.1| Coiled-coil domain-containing protein, putat...   229   5e-58
ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|2...   224   1e-56

>emb|CBI28266.3| unnamed protein product [Vitis vinifera]
          Length = 231

 Score =  231 bits (588), Expect = 1e-58
 Identities = 119/203 (58%), Positives = 147/203 (72%), Gaps = 2/203 (0%)
 Frame = +3

Query: 48  MKKYGLQLRIP--QQSRQPMGPPAARAPVFGXXXXXXXXXXXISRQATKKKALKDVEEQH 221
           MKKYGLQLR+P  QQ +QP  PP    P+             ISRQA+K K LKD+EEQH
Sbjct: 1   MKKYGLQLRVPPSQQKKQPTRPPLP-PPLGFCDENEDDIEREISRQASKNKTLKDIEEQH 59

Query: 222 KKALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYE 401
           KKALE+DPT FDYD VY++MKE  + RPL QDR++R+ KYI +L+EKAKQRE+EHEIIYE
Sbjct: 60  KKALEEDPTAFDYDDVYEEMKEKTI-RPLAQDRQERKPKYIQKLIEKAKQREREHEIIYE 118

Query: 402 RKLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXXDVTKKSDILDF 581
           +KL KERSKD+ +Y DKDK+IT AYKKKLAEQ KW++            DVTKKSD+ DF
Sbjct: 119 KKLVKERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLSDF 178

Query: 582 YFNLSKNVAYGAKAAESSRQVEQ 650
           Y+NLSKNVA+G   A+  ++ E+
Sbjct: 179 YYNLSKNVAFGGIEAKLRKREEK 201


>ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulatory protein 1 [Vitis
           vinifera] gi|147866225|emb|CAN79937.1| hypothetical
           protein VITISV_027776 [Vitis vinifera]
          Length = 300

 Score =  231 bits (588), Expect = 1e-58
 Identities = 119/203 (58%), Positives = 147/203 (72%), Gaps = 2/203 (0%)
 Frame = +3

Query: 48  MKKYGLQLRIP--QQSRQPMGPPAARAPVFGXXXXXXXXXXXISRQATKKKALKDVEEQH 221
           MKKYGLQLR+P  QQ +QP  PP    P+             ISRQA+K K LKD+EEQH
Sbjct: 1   MKKYGLQLRVPPSQQKKQPTRPPLP-PPLGFCDENEDDIEREISRQASKNKTLKDIEEQH 59

Query: 222 KKALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYE 401
           KKALE+DPT FDYD VY++MKE  + RPL QDR++R+ KYI +L+EKAKQRE+EHEIIYE
Sbjct: 60  KKALEEDPTAFDYDDVYEEMKEKTI-RPLAQDRQERKPKYIQKLIEKAKQREREHEIIYE 118

Query: 402 RKLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXXDVTKKSDILDF 581
           +KL KERSKD+ +Y DKDK+IT AYKKKLAEQ KW++            DVTKKSD+ DF
Sbjct: 119 KKLVKERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLSDF 178

Query: 582 YFNLSKNVAYGAKAAESSRQVEQ 650
           Y+NLSKNVA+G   A+  ++ E+
Sbjct: 179 YYNLSKNVAFGGIEAKLRKREEK 201


>ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like
           [Cucumis sativus] gi|449520024|ref|XP_004167034.1|
           PREDICTED: nuclear speckle splicing regulatory protein
           1-like [Cucumis sativus]
          Length = 322

 Score =  230 bits (586), Expect = 2e-58
 Identities = 120/194 (61%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
 Frame = +3

Query: 48  MKKYGLQLRI-PQQSRQPMGPPAARAPVFGXXXXXXXXXXXISRQATKKKALKDVEEQHK 224
           M KYGLQLR+ P Q +QP  PP   AP+             ISRQA+K KALKD+EEQHK
Sbjct: 1   MSKYGLQLRVKPSQQKQPTRPPLP-APLGFQDDDDDDVEREISRQASKNKALKDIEEQHK 59

Query: 225 KALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYER 404
           KALE+DP+VFDYDGVYD+MKE  VV+P   DRE+R+ KYI  LM+KA++RE+E EIIYER
Sbjct: 60  KALEEDPSVFDYDGVYDEMKEK-VVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYER 118

Query: 405 KLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXXDVTKKSDILDFY 584
           KLAKERSKD+H+Y  KDK++T AYKKKLAEQ KWM+            DVTKKSD+ DFY
Sbjct: 119 KLAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFY 178

Query: 585 FNLSKNVAYGAKAA 626
           F+L KNVAYGA+ A
Sbjct: 179 FSLQKNVAYGARNA 192


>ref|XP_002523868.1| Coiled-coil domain-containing protein, putative [Ricinus communis]
           gi|223536956|gb|EEF38594.1| Coiled-coil
           domain-containing protein, putative [Ricinus communis]
          Length = 327

 Score =  229 bits (583), Expect = 5e-58
 Identities = 115/215 (53%), Positives = 149/215 (69%)
 Frame = +3

Query: 15  FSHFYI*VEEKMKKYGLQLRIPQQSRQPMGPPAARAPVFGXXXXXXXXXXXISRQATKKK 194
           F H +   E + +KYGLQLR+  Q +    P   +  +FG           ISR A+K K
Sbjct: 2   FMHKFECSEMQQQKYGLQLRVKPQQQAKKPPLPTKPLLFGQDEDDDNVEKEISRHASKNK 61

Query: 195 ALKDVEEQHKKALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQR 374
           +LKD+EE HKKALE+DP+ FDYDGVYD MK+  V +P  QDR++R+ KYI  LM+KA+ R
Sbjct: 62  SLKDIEEMHKKALEEDPSAFDYDGVYDDMKQK-VAQPRHQDRQERKPKYIEALMKKAEIR 120

Query: 375 EQEHEIIYERKLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXXDV 554
           ++EHEIIYE+KL KER+KD+H+Y DKDK++TSAYKKKLAEQ KWM+            DV
Sbjct: 121 QREHEIIYEKKLTKERTKDDHLYADKDKFVTSAYKKKLAEQAKWMEEERLRQLKEEKDDV 180

Query: 555 TKKSDILDFYFNLSKNVAYGAKAAESSRQVEQDEI 659
           TKKSD+ DFYFNL KNVA+GAK  +S +Q +Q E+
Sbjct: 181 TKKSDLSDFYFNLGKNVAFGAKEIDSRKQEKQTEL 215


>ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|222849233|gb|EEE86780.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  224 bits (571), Expect = 1e-56
 Identities = 114/203 (56%), Positives = 148/203 (72%)
 Frame = +3

Query: 48  MKKYGLQLRIPQQSRQPMGPPAARAPVFGXXXXXXXXXXXISRQATKKKALKDVEEQHKK 227
           MKKYGL LR PQQ + P  PP   A  FG           ISRQA K K+LKD+EEQHKK
Sbjct: 1   MKKYGLLLRQPQQKKPPRPPPPT-ALGFGDDDEDDVEKE-ISRQAAKNKSLKDIEEQHKK 58

Query: 228 ALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYERK 407
           ALE+DP+VFDYDGVYD+MK+  + +P   DR++R+SKYI  LM KA++R+++H++I+E+ 
Sbjct: 59  ALEEDPSVFDYDGVYDEMKQK-IAQPKALDRQKRESKYIKTLMGKAEERKRQHDVIFEKN 117

Query: 408 LAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXXDVTKKSDILDFYF 587
           LAKERSK++H++ DKDK++T+AYK+KLAEQEKWM+            DVTKKSD+ DFYF
Sbjct: 118 LAKERSKEDHLFADKDKFVTAAYKRKLAEQEKWMEEERLRELREEKEDVTKKSDLSDFYF 177

Query: 588 NLSKNVAYGAKAAESSRQVEQDE 656
           NL KNVA GAK   S +Q +QD+
Sbjct: 178 NLGKNVALGAKDLLSKKQEKQDK 200


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