BLASTX nr result
ID: Coptis24_contig00014674
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014674 (676 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28266.3| unnamed protein product [Vitis vinifera] 231 1e-58 ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulato... 231 1e-58 ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulato... 230 2e-58 ref|XP_002523868.1| Coiled-coil domain-containing protein, putat... 229 5e-58 ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|2... 224 1e-56 >emb|CBI28266.3| unnamed protein product [Vitis vinifera] Length = 231 Score = 231 bits (588), Expect = 1e-58 Identities = 119/203 (58%), Positives = 147/203 (72%), Gaps = 2/203 (0%) Frame = +3 Query: 48 MKKYGLQLRIP--QQSRQPMGPPAARAPVFGXXXXXXXXXXXISRQATKKKALKDVEEQH 221 MKKYGLQLR+P QQ +QP PP P+ ISRQA+K K LKD+EEQH Sbjct: 1 MKKYGLQLRVPPSQQKKQPTRPPLP-PPLGFCDENEDDIEREISRQASKNKTLKDIEEQH 59 Query: 222 KKALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYE 401 KKALE+DPT FDYD VY++MKE + RPL QDR++R+ KYI +L+EKAKQRE+EHEIIYE Sbjct: 60 KKALEEDPTAFDYDDVYEEMKEKTI-RPLAQDRQERKPKYIQKLIEKAKQREREHEIIYE 118 Query: 402 RKLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXXDVTKKSDILDF 581 +KL KERSKD+ +Y DKDK+IT AYKKKLAEQ KW++ DVTKKSD+ DF Sbjct: 119 KKLVKERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLSDF 178 Query: 582 YFNLSKNVAYGAKAAESSRQVEQ 650 Y+NLSKNVA+G A+ ++ E+ Sbjct: 179 YYNLSKNVAFGGIEAKLRKREEK 201 >ref|XP_002271014.1| PREDICTED: nuclear speckle splicing regulatory protein 1 [Vitis vinifera] gi|147866225|emb|CAN79937.1| hypothetical protein VITISV_027776 [Vitis vinifera] Length = 300 Score = 231 bits (588), Expect = 1e-58 Identities = 119/203 (58%), Positives = 147/203 (72%), Gaps = 2/203 (0%) Frame = +3 Query: 48 MKKYGLQLRIP--QQSRQPMGPPAARAPVFGXXXXXXXXXXXISRQATKKKALKDVEEQH 221 MKKYGLQLR+P QQ +QP PP P+ ISRQA+K K LKD+EEQH Sbjct: 1 MKKYGLQLRVPPSQQKKQPTRPPLP-PPLGFCDENEDDIEREISRQASKNKTLKDIEEQH 59 Query: 222 KKALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYE 401 KKALE+DPT FDYD VY++MKE + RPL QDR++R+ KYI +L+EKAKQRE+EHEIIYE Sbjct: 60 KKALEEDPTAFDYDDVYEEMKEKTI-RPLAQDRQERKPKYIQKLIEKAKQREREHEIIYE 118 Query: 402 RKLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXXDVTKKSDILDF 581 +KL KERSKD+ +Y DKDK+IT AYKKKLAEQ KW++ DVTKKSD+ DF Sbjct: 119 KKLVKERSKDDALYADKDKFITGAYKKKLAEQAKWLEEERLRELREEKDDVTKKSDLSDF 178 Query: 582 YFNLSKNVAYGAKAAESSRQVEQ 650 Y+NLSKNVA+G A+ ++ E+ Sbjct: 179 YYNLSKNVAFGGIEAKLRKREEK 201 >ref|XP_004152856.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like [Cucumis sativus] gi|449520024|ref|XP_004167034.1| PREDICTED: nuclear speckle splicing regulatory protein 1-like [Cucumis sativus] Length = 322 Score = 230 bits (586), Expect = 2e-58 Identities = 120/194 (61%), Positives = 143/194 (73%), Gaps = 1/194 (0%) Frame = +3 Query: 48 MKKYGLQLRI-PQQSRQPMGPPAARAPVFGXXXXXXXXXXXISRQATKKKALKDVEEQHK 224 M KYGLQLR+ P Q +QP PP AP+ ISRQA+K KALKD+EEQHK Sbjct: 1 MSKYGLQLRVKPSQQKQPTRPPLP-APLGFQDDDDDDVEREISRQASKNKALKDIEEQHK 59 Query: 225 KALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYER 404 KALE+DP+VFDYDGVYD+MKE VV+P DRE+R+ KYI LM+KA++RE+E EIIYER Sbjct: 60 KALEEDPSVFDYDGVYDEMKEK-VVQPRAYDREERKPKYIQNLMKKAQEREREQEIIYER 118 Query: 405 KLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXXDVTKKSDILDFY 584 KLAKERSKD+H+Y KDK++T AYKKKLAEQ KWM+ DVTKKSD+ DFY Sbjct: 119 KLAKERSKDDHLYAGKDKFVTGAYKKKLAEQAKWMEEERLRQLREEKEDVTKKSDMSDFY 178 Query: 585 FNLSKNVAYGAKAA 626 F+L KNVAYGA+ A Sbjct: 179 FSLQKNVAYGARNA 192 >ref|XP_002523868.1| Coiled-coil domain-containing protein, putative [Ricinus communis] gi|223536956|gb|EEF38594.1| Coiled-coil domain-containing protein, putative [Ricinus communis] Length = 327 Score = 229 bits (583), Expect = 5e-58 Identities = 115/215 (53%), Positives = 149/215 (69%) Frame = +3 Query: 15 FSHFYI*VEEKMKKYGLQLRIPQQSRQPMGPPAARAPVFGXXXXXXXXXXXISRQATKKK 194 F H + E + +KYGLQLR+ Q + P + +FG ISR A+K K Sbjct: 2 FMHKFECSEMQQQKYGLQLRVKPQQQAKKPPLPTKPLLFGQDEDDDNVEKEISRHASKNK 61 Query: 195 ALKDVEEQHKKALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQR 374 +LKD+EE HKKALE+DP+ FDYDGVYD MK+ V +P QDR++R+ KYI LM+KA+ R Sbjct: 62 SLKDIEEMHKKALEEDPSAFDYDGVYDDMKQK-VAQPRHQDRQERKPKYIEALMKKAEIR 120 Query: 375 EQEHEIIYERKLAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXXDV 554 ++EHEIIYE+KL KER+KD+H+Y DKDK++TSAYKKKLAEQ KWM+ DV Sbjct: 121 QREHEIIYEKKLTKERTKDDHLYADKDKFVTSAYKKKLAEQAKWMEEERLRQLKEEKDDV 180 Query: 555 TKKSDILDFYFNLSKNVAYGAKAAESSRQVEQDEI 659 TKKSD+ DFYFNL KNVA+GAK +S +Q +Q E+ Sbjct: 181 TKKSDLSDFYFNLGKNVAFGAKEIDSRKQEKQTEL 215 >ref|XP_002312825.1| predicted protein [Populus trichocarpa] gi|222849233|gb|EEE86780.1| predicted protein [Populus trichocarpa] Length = 321 Score = 224 bits (571), Expect = 1e-56 Identities = 114/203 (56%), Positives = 148/203 (72%) Frame = +3 Query: 48 MKKYGLQLRIPQQSRQPMGPPAARAPVFGXXXXXXXXXXXISRQATKKKALKDVEEQHKK 227 MKKYGL LR PQQ + P PP A FG ISRQA K K+LKD+EEQHKK Sbjct: 1 MKKYGLLLRQPQQKKPPRPPPPT-ALGFGDDDEDDVEKE-ISRQAAKNKSLKDIEEQHKK 58 Query: 228 ALEDDPTVFDYDGVYDQMKEAAVVRPLVQDREQRQSKYIGRLMEKAKQREQEHEIIYERK 407 ALE+DP+VFDYDGVYD+MK+ + +P DR++R+SKYI LM KA++R+++H++I+E+ Sbjct: 59 ALEEDPSVFDYDGVYDEMKQK-IAQPKALDRQKRESKYIKTLMGKAEERKRQHDVIFEKN 117 Query: 408 LAKERSKDEHIYKDKDKYITSAYKKKLAEQEKWMQXXXXXXXXXXXXDVTKKSDILDFYF 587 LAKERSK++H++ DKDK++T+AYK+KLAEQEKWM+ DVTKKSD+ DFYF Sbjct: 118 LAKERSKEDHLFADKDKFVTAAYKRKLAEQEKWMEEERLRELREEKEDVTKKSDLSDFYF 177 Query: 588 NLSKNVAYGAKAAESSRQVEQDE 656 NL KNVA GAK S +Q +QD+ Sbjct: 178 NLGKNVALGAKDLLSKKQEKQDK 200